Names & Information
Knowledge of BnaC03G0191300ZS:
| Gene Name | BnaC03G0191300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g18920D [Brassica napus] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:3507 nt ATGAGCTTATCAACGTTGACCGGCCAAAAGTTTCCCATGACGACTACCACCACCACCATCACGACGGACGAACAAATCTC TGAGTGGCGGCCGCAAGTGTTCATCAACTTCCGGGGAGCTGATCTTCGTGACGGGTTCATCAGTCATTTGAGGAAGGCCC TGGACGACAATAAAATCAAGTACTACATCGACTGTGAAGAGCCCAGGGGTGCATCTCTTGAGATCCTCTTTCAAAGGATC AAGGAGTCGCAGATCGCCCTGGTGTTCTTCTCGAATCTGTACGCAACGTCAGAGTGGTGCTTGGACGAACTGGTGGAAAT AATGAAGAACATGGAGAAAGGAAGCCTCAGAGTCATACCCGTCTTCTTCAAGGTGGAGCCAGAGGACGTGAAAGGGCAAA AGAAAGAGTTCGGCGTGGCGTTATACGGAGAAGGTCGCCGTAAAAGACCCAAGATGGCGCAATGGGAAGATGCTTTAGAA GCTGTTCCCAAACAGATGGGGTTGGTATTGGCTGAAAAAAGTTCTGAAAATGACTTCCTCATCCGGCTAGTCAACAACGT CAAAGAGGTGGAAGCCATAATATTAAAAGAAAGAGAAGGCTCCTCTTCCTCTGAACCAATAATCAAACACGTTATGGGTA CAATATCATCTTCTCTTCCCCCTTGCGAGAAGGAGCAACGCCTTGAGCAACTCGAACAACGGTTTGGTTTAGATGATAAA GTTACTCAAATACTTGGAATTGTTGGTATGGCCGGGATTGGTAAAACCACTCTCGCGCAAAAGCATTTCGATACGTGCAA TAAGTTATCGGTGAAAAAGATTATTCTTGGCATTCATGAGAAGTCGAAGAACGAGGAGGGATCATCAAATTGGCTGGAAA AAGAAGTTGAGGATGAAATTTTCAAAAACAGATGTTTCATTCTATTGGACGACGTGAGCGAAAAGTCACAAATAGAGTAT CTACTCGGTAACCTCAGCCGGATTAAGCAGGGAAGTAAGATTGTCATCACAACGCGCGACAAGTCATGGATCGGAAGAGT GGTTCACGATACTTATGTGGTCCCTGGATTGAACGACAACGAAGCCTTACTACTCTTTAGCCGACATGCCTTCGGAAACC AAGCCTATACTCCCACGAAGAAAGGGCTGTCCAAAAAGTTTGTGGACTATGCCGGAGGCAATCCAAGAGCCCTTGAGGAA CTAGGGAAGGAGCTTTGCGGTAAAAACGATGCTCACTGGGAAAAGAGAATAGAAACGCTGTCACATCGTTGCAATGTGAA TATCAAAAGAGAGTTAAAAATCAGTTATGACAGGTTGACTGATGAGCAAAAAGATGCGTTTCTTGACATAGCTTGTTTCT TCACATCAGAAAAGGAGGATTGCGTGACAAGTTTACTGGCTTCCAAAGACTCTCATGGCTCCGGTGCAGAAGCTGCGAGG GTTATTGGAGACCTTGCTGACAAGTTCATGATAAGTGTCTCTGCTGGCCAGATCGAGATGCCTCAGATACTGTGTTCACT GGGCAGAGAACTTGGTTTATTGCCATCTTCAGAAGATAATATGGGAAAGAGCAGGCTATGGGATCATGATACAGTTGTTA AAACTTTGGTCAACCAAAAGGAAGAAGATAGTACTGTGAGAGGTATTTTACTGGACGTGTCGGAGTTAAAAGAGGAATTC GCCATAGCATCAGACAAGTTGACCTTAATGCCAAACCTGCGATATCTCAAAATCTTTGATTCTACCTGCCCTCGGCAATG TAAAGCTGTTGTTGAAGCTGTTAAGTGCAAAGTACACTTGCCCGATGAACTTGAATCGCCTTTGAAAAACCTTCGATATC TCCACTGGCTGAAATTTCCATCGACCGAACTTCCACCGAACTTCAAACCGGAGAATCTTGTTGACCTCAGACTGCCATAC AGTATGATTGAACGTGTTTGGAAAGGCAAAAAGGAGACACCAAATCTGAAGTGGGTTGATTTAAGTCACTCGACAAAGTT GACCGACCTGTCAGCTTTGTGTAATGCTGAATCTCTTGAAATACTAAATCTTGAAGGTTGCACTGAACTTGTTGATTTTC CCGAAGATACCGAAAATATGAAGAGTCTTTCTTTCTTGAACCTCAGAGGATGCACAAGTCTCTCGTCTCTCCCAGAGATG AATAATTTAGTCCGTCTCAAGACTCTCGTCCTCAGTGGCTGCTCAAGCTTTGATGACTTTCATGTGAATGCTAAAAATCT TGAACATGTACATTTAGATGGGACAGAAATACTGAACCTTCCCCGGACGATCGAGCAACTCCAAAGACTTATCGTCCTGA ATCTGAAAGACTGCAAACGGCTGAGGACTCTCCCGGATTGTCTTGGCAAGCTCAAGGCTCTTGAAGAACTAATACTCTCT GGTTGTTCAAGGCTTAGGAGATTTCCTGAAATTAAGGAGGGCATGGAAAATCTGCAGATTTTACTACTCGATAGGACAGA AATCACAGACGTGCCAAAGATGTTATTACTACGATGTGCTAACCCAGTAGACCAAGTGAATAATGTCCAACCGTCACCCC GGACGGGTGGACTATCCTTGTTGCGACATCTGTGCTTAAGCAGAAATGACAAGATCATCAGTCTGCGATGGAGTATTAGT GAGCTTTATCATTTGAAATGGATCGACGTGAAGTATTGCAAGAAACTCCAATCTATTTCGATGTTACCACCAAATCTTCA ATGCTTAGATGCACATGGTTGCACCTCACTTAAAACAGTGGCGAGTCCTCCTATGGCAACAGAGCAAGTGCCCTCCTCAT TCATTTTCACTAACTGTGACAAACTAGAGCACGTCGCCAAGAATGAAATCACATGCTATGGTCACGATAAAGGCCGGATC CTGTCAAAAACACTGAACCGCCACAATAAGGGTCTTTCTTTTGAAGCTTTGGTTTCCATTTGCTTTCCTGGAAGTGAAGT CCCTGCTTGGTTTGGTCATAAAGCTTCTGGAGCAGTGTTAAAGCCTGAGCTTCCTCAACACTGGAGTGACAGCGGTTTGG TCGGCATAGCACTATGCGCCATTGTCGCGTTTGAAGAACTAAATATTGGAAACAACAACCTCCATGTGAAATGCATATTT GACTTCAACAATGTTAAGACATCCTTCAGCTACTTTAATTTCCCTGTTGGTGGTTTATGGGAAACCAGCGATGAGCAACG CACGATCACATCTACTCATGTGTTCATTGGCTACACCAATTGGTTAAATATCAAGAAATGTCAAGAAGAAGATGGTAAGG AAGAGTGTGTTCCAAAAAGAAAAAAAGAAGGGTGTGTTCCTACTAAGGCTTCAATTGAATTTCAAGTGATAAATGATTTT GGTGAGGTTAAGAATTGTGAGGTATTGAAGTGCGGTTTTAGTTTAGTTTATGAAACTGGTTCTTGGGAGGCAAGCTCAAG GGCAGATGGTGTTGAACAAGGTGAACTTGAATCTCATGAGGGAGTAGGAAGGGTTCGAAAATTATGA |
| AA seq | Len:1169 aa MSLSTLTGQKFPMTTTTTTITTDEQISEWRPQVFINFRGADLRDGFISHLRKALDDNKIKYYIDCEEPRGASLEILFQRI KESQIALVFFSNLYATSEWCLDELVEIMKNMEKGSLRVIPVFFKVEPEDVKGQKKEFGVALYGEGRRKRPKMAQWEDALE AVPKQMGLVLAEKSSENDFLIRLVNNVKEVEAIILKEREGSSSSEPIIKHVMGTISSSLPPCEKEQRLEQLEQRFGLDDK VTQILGIVGMAGIGKTTLAQKHFDTCNKLSVKKIILGIHEKSKNEEGSSNWLEKEVEDEIFKNRCFILLDDVSEKSQIEY LLGNLSRIKQGSKIVITTRDKSWIGRVVHDTYVVPGLNDNEALLLFSRHAFGNQAYTPTKKGLSKKFVDYAGGNPRALEE LGKELCGKNDAHWEKRIETLSHRCNVNIKRELKISYDRLTDEQKDAFLDIACFFTSEKEDCVTSLLASKDSHGSGAEAAR VIGDLADKFMISVSAGQIEMPQILCSLGRELGLLPSSEDNMGKSRLWDHDTVVKTLVNQKEEDSTVRGILLDVSELKEEF AIASDKLTLMPNLRYLKIFDSTCPRQCKAVVEAVKCKVHLPDELESPLKNLRYLHWLKFPSTELPPNFKPENLVDLRLPY SMIERVWKGKKETPNLKWVDLSHSTKLTDLSALCNAESLEILNLEGCTELVDFPEDTENMKSLSFLNLRGCTSLSSLPEM NNLVRLKTLVLSGCSSFDDFHVNAKNLEHVHLDGTEILNLPRTIEQLQRLIVLNLKDCKRLRTLPDCLGKLKALEELILS GCSRLRRFPEIKEGMENLQILLLDRTEITDVPKMLLLRCANPVDQVNNVQPSPRTGGLSLLRHLCLSRNDKIISLRWSIS ELYHLKWIDVKYCKKLQSISMLPPNLQCLDAHGCTSLKTVASPPMATEQVPSSFIFTNCDKLEHVAKNEITCYGHDKGRI LSKTLNRHNKGLSFEALVSICFPGSEVPAWFGHKASGAVLKPELPQHWSDSGLVGIALCAIVAFEELNIGNNNLHVKCIF DFNNVKTSFSYFNFPVGGLWETSDEQRTITSTHVFIGYTNWLNIKKCQEEDGKEECVPKRKKEGCVPTKASIEFQVINDF GEVKNCEVLKCGFSLVYETGSWEASSRADGVEQGELESHEGVGRVRKL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |