Names & Information
Knowledge of BnaC03G0217600ZY:
| Gene Name | BnaC03G0217600ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC04g12970D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3399 nt ATGGCTTCTTCATCATCTTCTTCTTCTCCAGTGATTATCAATTGTGCACACGATGTATTCCTCAGCTTCAGAGGACACGA CGTCCGCCGCAAGTTCCGTTCCCACTTTCTCAAGGAGCTCGACCGCAAGGTAATCACCTTCAAGGACGATGAGATGGAAA GAGGCCGATCTATTGGGCCTGAGCTTATCAAGGCCATACAAGGATCCAGGATCTCAATTGTAGCGTTTTCCGAAAACTTT GCAAATTCGAGCTGGTGCTTGGATGAGTTAGCTGAGATTATGAGGTGCAGAGAAGAACGAGGCCAAATCGTGATACCCAT TTTCTACGACGTGGATCCTTCTCATGTCAGGTATCAAACCCACGCCTTCGGAGAGATCTTCGAAAAGACTTGCAAAGGCA GAAAGGAGGAAGATAAACATATGTGGCGGCAGGCTTTGACCCACGCAGCCAACATAGCCGGAGAGGATTCTCGGAATTGG CCTGACGAAGCTAAATTGGTCGAGAAAGTCGTCAATGATGTTTCAAGCAAACTGAATTCAACAACATCCAATGATTTTGA GGACATGGTGGGAATCAAAAGTCACATGAAAAACATGAATTCATTGTTGAATTTGGAGTCAGAGGAGGTGATCATGGTAG GGGTTTGGGGTCTATGTGGAGTTGGTAAGACTACCATTGGACGAGCTCTCTTTAGTCAACTCTCCTGTCAATTCCAAGGC AGCATTTTCATTGATAAGACTAAGAAGAATCTTACAAGGGCTAAATCAGACGACTACAACACACAATTGTACTTGCAAAC ACAGTTTCTGGCTGAGGTTCAGGACCAGAAGGACATAAAGATACAGGGTTTACGTGCGGTGGAAGAAAGGTTAGGACATA AGAGAGTTCTTGTTGTTTTTGATGATATGGATGATCATGTCCTCTTAAATGCCTTGGTGGGGAAAACTACATGGTTTGGT CCTAGAAGTAGAATTGTTGTAATTTCAGAAGATAGGGAGTTTCTAAAGGCCCGTGGAATTGGATCTGATCGTATTTATGA GGTGGCTTTACCGTCGGAAGAGCTAGCGTTCCAGATGTTCTGCCGATGTGCATTCCATCAAGACTCTCCACCTGATGGTT TTATAGAGCTTGCTACTGAAGCTGTAAAGCTCGTCGGGAACCTTCCACTGTGTCTCAACTTCTTGGGTTCGTCCCTTGAA GGGGTGAAGAAGGAGGAGTGGGCAGATAGGGTGCCTCAGATCAGAATTTTTATGAGTAAACAGATTGATAAAATATTAAG AGACGGCTATGATAGGTTAAAAGAAGAAGATAAGGCAATATTTCGTCACATCGCTTGTTTATTTAATCATAAGCCACGTG ACTACGTGATACGGTTGCTTGAAGATAGTAAGTTGGATGTTGACGTTGGACTCGTTACTCTAGCTGAAAGGTGTCTCATA AAGATATCAGGGGATAATATTATTAGGATGCACGAATTCCTGCAAGAGATGGGTAGAGAAATCGTACGTCAACCATGTAT TCATGAGCCTGGAAAACGTGAATTCTTAATGGAGTGTCAGGAGATTTGTGATGTACTTGCAAAAGGAACTGGAACTAAAA GTGTTTTAGGCATATTTTTGAACTTATCTGAAATGAAGGATACGTTATGTTTTGGCGAGGAAGTATTCGAAGGAATGACA AACCTTCGGTTTCTAAGAATCTACGGCATCTCACAAGAGGATAAAGAAATTGGTTTGGAATTTCGGCATCTCAACCTTAG TACGTTGAAATGGTGGGATGGCTCACGTAAGCCTTTAAAGGAAGGCAAATACTATATGGGGCGCCAGCTTAGATTACTTG AATGGTGGGGATACCCAATGTGGCGCTTGCCTTCTTACATCTGTGCAGAAAACCTTGTTGAACTCATAATGCCGGATAGC CGCCTTACGATGTTGTGGACTGGGGTTCAGCTGCTTAATAACCTCAAGAAGATAGATTTGCGGAGATCTAAAAAGCTGAA TGAACTCCCAAATCTTTCAACGGCCACCAATCTCGAGGAACTGTATCTTGAAGATTGCTGGAGTCTGTGGAAGATTACTT CCTCTATTCGTTATCTCAAGAAACTGAGGAAGCTAGACATGAAAAGATGCAAAGAACTGCTGCTGCTTCCAACCGATATT GACTTGGAGTCTCTCCATTCCCTCAATCTCAGTGGATGCTCCAAGTTAGAGAGTTTTCCTCACATTTCAAGGAATATTTC AAATCTTGTTCTTGATGAAACCAAGATTGAAGAAGTTCCTGAAAGGATAGAAGATATCTCTGGGCTCAATTACATATTGA TGACCGGTTTCAGCAACTTAAAATATTTTTCTTCCAACATTTCGAAACTGAAACATTTTGAGATGATGTTGTTTACAGTG GTGACGACGACATATGATAGTGGCATCATGGACAATAGGACAAACGATGTCTTCCTAAGCTTCCATAGGGAAGATGTTCG CAAAGCTTTTGTGAGCTACTTGCACAAGGAATTTATGAGAGACCAGGACCTGGCTACTAATGTTGTAAACGAGATAAGAT CTTCAAGAATCGCAATAGTCATTCTTACAGATAACTACATGTCTTCGGAACGGTGCTTGGATGAGTTGGTGGAGATCATA GAGTGCAGCGAAGAGATTGGTCAAAAAGTGATCCCCGTTTATTATGATGTGGATACTGTTAATATCAGCAGGCAGATCCA AGACATTATTAAGACCGAATCGTACCCACAAAAACTGAGACAAGCTTTTACTGTAGTAAGCCAACTTCAGGGATATAATT TCTCAACCTGGGATCCTGAAACTGCGGTGAGTCAAATGCTGGCTGATGATATATCGTTTTCACCAAAAGAGTTATTTGAT ATGGAAACATTAAAAGAGGAATTCAATGGTCTAGAGTGGAAGGAGAAGGTGTTGTTTTGTCACATTGCTTGCTTTTTCAA TAATGAGACATATGAGAATGTGACGCAATTGCTGAAAGACTGTGGGTTTGATGTTGGAGGTAGTCTTGAGATTCTATATG AAAAGTCTCTGATACAGATATCAGTAGAGAGAGTCATAATTATGCGTCCTGTGCTGCAAAAGATAGGCAGAGATGAAGTT CTTGCAGAATTCATTAACGTGCCTGCAAATCGTCAGTTCTTGATGGATACTGAGGGTTGCGACCTACTTATTGATCTAAC TGATGATACTAAAAGAATGTACGGTATCTCATTTAACATATCAGAAATGGAACAGAGATTGGCAAGAGATGAAAGACTCA AAGGAATGAAAAGGTTGAAGGTTATGAGAATGTACAAGGACAGTTTGTACGGTCAAGAAGTCCGAGTTCATTTAGTTATA GGCCTCCACTCTTTGTGGGAGCGCCTGAGTAATATTTGA |
| AA seq | Len:1133 aa MASSSSSSSPVIINCAHDVFLSFRGHDVRRKFRSHFLKELDRKVITFKDDEMERGRSIGPELIKAIQGSRISIVAFSENF ANSSWCLDELAEIMRCREERGQIVIPIFYDVDPSHVRYQTHAFGEIFEKTCKGRKEEDKHMWRQALTHAANIAGEDSRNW PDEAKLVEKVVNDVSSKLNSTTSNDFEDMVGIKSHMKNMNSLLNLESEEVIMVGVWGLCGVGKTTIGRALFSQLSCQFQG SIFIDKTKKNLTRAKSDDYNTQLYLQTQFLAEVQDQKDIKIQGLRAVEERLGHKRVLVVFDDMDDHVLLNALVGKTTWFG PRSRIVVISEDREFLKARGIGSDRIYEVALPSEELAFQMFCRCAFHQDSPPDGFIELATEAVKLVGNLPLCLNFLGSSLE GVKKEEWADRVPQIRIFMSKQIDKILRDGYDRLKEEDKAIFRHIACLFNHKPRDYVIRLLEDSKLDVDVGLVTLAERCLI KISGDNIIRMHEFLQEMGREIVRQPCIHEPGKREFLMECQEICDVLAKGTGTKSVLGIFLNLSEMKDTLCFGEEVFEGMT NLRFLRIYGISQEDKEIGLEFRHLNLSTLKWWDGSRKPLKEGKYYMGRQLRLLEWWGYPMWRLPSYICAENLVELIMPDS RLTMLWTGVQLLNNLKKIDLRRSKKLNELPNLSTATNLEELYLEDCWSLWKITSSIRYLKKLRKLDMKRCKELLLLPTDI DLESLHSLNLSGCSKLESFPHISRNISNLVLDETKIEEVPERIEDISGLNYILMTGFSNLKYFSSNISKLKHFEMMLFTV VTTTYDSGIMDNRTNDVFLSFHREDVRKAFVSYLHKEFMRDQDLATNVVNEIRSSRIAIVILTDNYMSSERCLDELVEII ECSEEIGQKVIPVYYDVDTVNISRQIQDIIKTESYPQKLRQAFTVVSQLQGYNFSTWDPETAVSQMLADDISFSPKELFD METLKEEFNGLEWKEKVLFCHIACFFNNETYENVTQLLKDCGFDVGGSLEILYEKSLIQISVERVIIMRPVLQKIGRDEV LAEFINVPANRQFLMDTEGCDLLIDLTDDTKRMYGISFNISEMEQRLARDERLKGMKRLKVMRMYKDSLYGQEVRVHLVI GLHSLWERLSNI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |