Names & Information
Knowledge of BnaC03G0245700ZY:
| Gene Name | BnaC03G0245700ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA03g24930D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:2271 nt ATGGGTCATACCGCCGATCCAAACTCGTTTGGGGCCAAAGATGATTCTGAGAAAATCTCCGTAAACAGCGTTTTGGAAGC GCATTTCTCCGGTGGTAATCCTTCGGATCAACAAGAAGAGAAACGGCTAAAGATCTGTGTTCCTCGTAAGAAACGTCATA AGTATGACAAAGGGCAGCAGAAGGTCATACAGACCACTGCGTCGAGTTTCATGAACCTCGTCCAGCAATTCACCGGGGAT CCTAGCTCTGTTTCAGAGTCAAAAAGTTCTAACACAGGCGTCGTTGCAGCATCATCATCTTCCTCTACATATTATGATGT TGTAATCAGATACAGAAGAGGGGACATAGGAAACAATGATTTCATTAGCCATCTTCGTGCTGCGCTTTGCCGGAGAAGGA TTTCTGTTGATGAAGACTTTGATGAAGTGGATACAGTTCCAGATTGTAGGGTTTTGATCATATTCTTAACCAGCACATAC TTCTCTTCTACCCTATTAAACATTCTTGAACACCAACGAAGAGAGTATCAAGTAGTTTATCCTATTTTTTACGGTCTATC ACCATCTGATTTGATCAGCAATAGCAAGGTTTATGATATATTTTTTCACCAAGACGAGGCAAAAAGGTGGCAGGCTGCTT TGAAGGAAATAACTCAGATGCCTGGCTACACATTGACAGATAAGTCCGAGTGTGATCTCATAGATGAGATTGTCAGAGAT GCTTTGTCGGTTGTCTACTCCAGTTACAAGGTCACCATGGTTGGGAGGGATATGCAGATAAAGGAAATTTTGTCACTGCT TTGCGTTGAGTCTCCAGATGTTCGCAGCATAGGCATATGGGGTACAGTTGGTATAGGAAAAACAGCAATTGTTGAAGACA TCTTTCGCATAATTTCTGTCCAATATGAGACTTGTGTCTTCCTTAAGGACCTTCATAAAGAAGTAGAGGTAAAAGGGCAG AATGCTGTGAGGGAGGACTTTTTGTGTAAACTTTTAGAGGTAGAACCAGATGTCTTACGTACTTCCAAGATTAAAACAAG TTTCTTGAAGAGTAGGCTTCAGCGTAAAAGGGTCCTCGTTATTCTCGACGATGTGAATGACTTGAGAGATGTTCAAACTT TTTTGGACAACCTTATCTATTTTGGTCCAGGAAGCAGAATAATCATAACCTCTAGAAACAGACATGTTTTTGTACTTGGC AAAATCAATCATGTCTATGAGGTCAAGCCATTAGATATTTCGACGTCTCTACAACTTCTCGATCGTGGAACACTTCAGAA TGTTTTGTCACCTGAGGTTTACAGTAAACTGTCACTTGAGCTGATCAAATTTTCAAATGGAAATCCACAGGTTCTTCAGT TCTTGAGCAATAGAAAATGGAATCCGATATCAGAACAAGTTCAAGAAACATCTCCCATTTACATTCCAGGCAACAGGTCG AGAAATTGTTCGCCAAGAATCAGTGGACAGGCCTGGAGACCGGAGCAGGGCACATCAGCTATCGAGGGGATTTTCCTGGA CATGTCGCAGCTGAAATTCGATGCAAGTCCCAGTATATTCCAGAAAATGTGTAACCTTAGACTGTTAAAATTTTATTGCT CCAAAGTGATAGAGAATCGTGGAGTGTCTTTACCTCAAGGTCTTGAATACTTGCCGAGCAAGCTAAGGCTTCTGCACTGG GAATATTATCCTCTAAGCTCTTTGCCGCAATGTTTTGATCCGAAGAACCTCGTAGAGCTCAATTTGCCATATAGTTGTGT GAAAATACTTTGGAAAGGAAAAAAAAGTTTGGAAAAGCTGAAAAAGATGAGAGTTAGCTACTCCTACCAGTTAACAAAAC TCCCAAGACTTTCAACTGCGCCGAATCTCGAGCTTCTTGATCTTGAAGGTTGCAACAATTTGGTGAGCATCAGCCAGTCT ATATGTTATCTTACAAAGCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAGAGTATTCCATCTACGGTTGATTT AGAATCTCTTGAGGTTTTGAATATTTACGGCTGCTCAAAGCTAATGAATTTTCCTGAGATTTCACCAAATGTGAAACAAC TCTACATGGGTGGGACTATGGTACAAGAAATACCGCCGTCGATCAAGAACCTGGTATTGCTCGAGATACTGGACCTGGAA AACAGCAAACACCTCGTGAATATTCCAACCAGCATCTGCAACTTGAAGCACCTTGAAACTCTGAATCTCTCAGGATGCTC AAGTCTTGAGCGGTTTCCAGGCTTTGTCTAA |
| AA seq | Len:757 aa MGHTADPNSFGAKDDSEKISVNSVLEAHFSGGNPSDQQEEKRLKICVPRKKRHKYDKGQQKVIQTTASSFMNLVQQFTGD PSSVSESKSSNTGVVAASSSSSTYYDVVIRYRRGDIGNNDFISHLRAALCRRRISVDEDFDEVDTVPDCRVLIIFLTSTY FSSTLLNILEHQRREYQVVYPIFYGLSPSDLISNSKVYDIFFHQDEAKRWQAALKEITQMPGYTLTDKSECDLIDEIVRD ALSVVYSSYKVTMVGRDMQIKEILSLLCVESPDVRSIGIWGTVGIGKTAIVEDIFRIISVQYETCVFLKDLHKEVEVKGQ NAVREDFLCKLLEVEPDVLRTSKIKTSFLKSRLQRKRVLVILDDVNDLRDVQTFLDNLIYFGPGSRIIITSRNRHVFVLG KINHVYEVKPLDISTSLQLLDRGTLQNVLSPEVYSKLSLELIKFSNGNPQVLQFLSNRKWNPISEQVQETSPIYIPGNRS RNCSPRISGQAWRPEQGTSAIEGIFLDMSQLKFDASPSIFQKMCNLRLLKFYCSKVIENRGVSLPQGLEYLPSKLRLLHW EYYPLSSLPQCFDPKNLVELNLPYSCVKILWKGKKSLEKLKKMRVSYSYQLTKLPRLSTAPNLELLDLEGCNNLVSISQS ICYLTKLVSLNLKDCSNLESIPSTVDLESLEVLNIYGCSKLMNFPEISPNVKQLYMGGTMVQEIPPSIKNLVLLEILDLE NSKHLVNIPTSICNLKHLETLNLSGCSSLERFPGFV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |