Names & Information
Knowledge of BnaC03G0305100ZS:
| Gene Name | BnaC03G0305100ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g29290D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3411 nt ATGGGTCAACTGAAATACTCAGTGTTCCTCTGTTTCAGAGGAGAAGATGTTCGAGTAGGCTTTCTAAGTTACCTCATAGG CACCCTAAAAAGGAAATCCATAAAATACTATGTTGATTACGAGGAGACAAGGGGAGAAGTTATGGAAATTTTCTTACAAA GGATCGCAGAGTCCAGGATTGTGCTTGTGATACTCTCACCCAAGTTCATGGAGTCGGATTGGTGCATAGATGAAGTTCTC AAGGCTCTGGAGACGCGTGAAGCAGGGACAAGCATCATTCCTGTCTTCTACAAAGTCAGCGTTGCGGACGTGAAGGGGTG GAATATCGTAAAACAAGGAGATAGGGATAAGTTCATAAACGTTACTAAACGTTTGGGATTGAGATCCAAAGACTACCCTA CTAGCGAGGCGGATTTTGTGAACAAGATCGTGGAGGAACTGGAGAAAGCGTTGACCAAACTGGAAACGGAGGAGGAAGAG AACAAGTTGAGGATGAAGCAGGCGATTACTACTAATACTACTATGCCTTTCTTTGGGACCAACAAACGCGTCAAGCAATT GCAAGAGAAGTTAATGATGGGGATCCCGACCCATACTCGCCTTGTCGGAGTTGTTGGGATGAAAGGTAGTGGCAAAACAA ACCTAGCGGAGATGTTCTTCGAGGAAGGAAAATGTTACTTCCTCAGACATTTGTTCTTCAGGGACAAAATAGGTAAGAAT ATGGAGAGTGGTGCGAAGCGCGATCTGCTCGTACAGCAGTTCCAGAAAAATCTTTTGAAGATATCAAATACTGAAGAAAA GATTAATAGCAAACTTCTTCTTGTCTTGGATGACTTCAGCGACAAGGAAGATATCATATGTCTTTTTGGTGACCGGGGAT GGATTACTCCAGGTAGCAAGATAGTTATTGTGGCAAGCGACAAGTCATTGGTCGAGGGACTGGTCGATGATACTTATGTG GTCCCAGGCTTGAACCAAAAGGAAGGGTTAGCATGCTTGAGTAATCACGCCTTTGGAGACGCCACACGTTGTGACTCAGA CGAAGGGAACTTGCGGACATTATTAGATTACGCCCGAGGAAACCCGTTAGCTCTCTCGACACTCGGCAAGGAGCTTTACG GCAGAGGCAACGGTCAGTGGGTCACAATACATGAAGCACTCGCAAACAAGAATATTCAAGACCTCTTCAAGTCGTGTTAC GACTGTCTGAATCGACCGCAGAAAGACGCGTTTCTCGACGTCACTTGTTTCTTTATATCGCAGGATCACGAGTTTGTCAA AACGGTGGTGGACTCATCATGCGGTGATGGTACAAGCGTCATCAAAGATCTCGCTGACAAGTTCTTGATCGAAATCACCA GCGGTCGAGTAGAAATGCATGGTTTGATGTATGCTCTAGGCAAGTATCTAGCATCACAAAACCAATGGAGGCTTTTGAAC CAACAAGACATTATCCAAGCGCTGGAGAAGAAACTTGATTTCGCCGGAGCTGTCAGAGGAATTTTCCTGGACATGTCCGA AGTTTCGGTTGCAAGAGCCTTAGGTCAAAAACCCTTTCACGGAATGAAAGAGCTCCGATACCTAAAGTTGTATACATCTT GTACACGTTTTCCTGAATCAGACAGCAAGTTAAACTTTCCAGAAGGACTTAAGTTTTCGTTGGAAAAGGTTCGATATCTC CACTGGCATAAATTCCCTTTAATGGAACTCCCAGAGGACTTCACACCCAAGAATCTTGTCGACCTCAAGCTTCCTTACAG CAACATTATACGACTTTGGGACAGTTCTAATGATGTGACAAACTTAAGATGGGTTGATCTCAGTCACTCCATAAACCTTC AAGACTTATCAGGTTTATCAGGAGCTGGAAATCTTCAAAGATTGAACCTTGAAGGGTGCACAGGATTAAAAGAATTACCA AAGGAGATAATGGAAACTATGACAAGCCTTCTTTACTTGAACATGAGAAGCTGCACAAGTCTCATATCTCTCCCAGAGAT CACTATCAAGTCTCTTAAAACACTTATCCTCACCAACTGCTCTAATCTTGAGAAGTTTCAGATGATTTTAGAAAACATAG AAGCTCTACATTTGGATGGTACTGCGTTAAAAGAACTTCCTGAATCCATTAAAGACCGGAAGAAGCTAGTCAAATTGAGC TTGAAGGACTGTACAAAGCTAGCAAGCGTTCCTGATTCTGTAGGCAAGCTGCAGGCTCTTGGAGAACTGATACTCTCTGG TTGTTCAAATCTCAGGAGTTTTCCGGACGTCAAAGGGAACATGAAAATGTTGCGGATTCTATTGCTTGATGGAACTGCAA TAAACCAGGTGCCTCAAGCGTTCCCCTCTGGTTCCAATGGTTTACAACGGCTTTCTTTGAGAGGAAATCTTGTGATCCAA ACCATCCAAGCTCACATCGGTCAGCTCTTTCATCTGAAGTTTCTTGACTTGCAAGATTGCAAGAACCTCACATCAATTCC GGTGCTTCCACCAAACCTTCAATGCTTAGATGCGCATGGTTGTGACTCGCTGACGACAGTAGCCAACCCACTAGCCTTTC TTAATCTGACCGATCAGATTCGTACCACACTCAGATTCTCTCAATGCAACAATCTGGATGAAGTTTCAAAGAGCTATATC ATATCCTACATTCAGAAAAAGAGCCAGTTGATGTCTAGTGCATTTAACCGCTATAGTTTGAGTTATGTTATGGAATCTTA TACTGGAGCTTGCTTTCCTGGGTGTCATGTTCCTGAATGGTTCCGGTACCAAGAGCATGGACCAGTGATAGAGACAGAGT TAAGAAGACAGGAGAGTCAAAACCGGCTTATCGGACTAGATCTTTGTGCACTTGTCTCGTTTCAACATTGCCAAGATCAA ATCAGTGGTTTTCATGTGAAATGCACTTTTGAATTCAAGAATGCGGATGGTTCTTTAATTAGGCGTTTACGTTGCACAGT AGGAGGTTTTTCAGGAACATGGACTGAGCCGCGTAAGGTTGAATCAGATCATGTCTTTGTTAGCTACACAAGCTTGTTGG AAGATCAAGAAACAGAGGAAGATAAGAAGGTGTGTAGTTCCACTAAGGTTTCCGTTAAATTTGAAGTGATTGATGATGCA GGTGAGTTGGTGACGCGCTCGGTGCTTAAATGCGGTTTCAGTATGGTGTATGAACCCGAGGGAACTGATCATGATAAGGT CTCTTGGGAAGTGGGCTGTGATGGACCCCCAAATGTGGCTGATCAGAATACCGATGATGATGATGAACCCATGTCATTCA CTACTCAAGAAGCAGAAGTAATCCCCATAGATGGACAAGGTTCTAATGGTGACGACGAAGGTCAACAACAATATTATGAA GAAGAATGCAGAGCTAAACGACAGTGCATCAAGGATGGATCTGAAAAGTAA |
| AA seq | Len:1137 aa MGQLKYSVFLCFRGEDVRVGFLSYLIGTLKRKSIKYYVDYEETRGEVMEIFLQRIAESRIVLVILSPKFMESDWCIDEVL KALETREAGTSIIPVFYKVSVADVKGWNIVKQGDRDKFINVTKRLGLRSKDYPTSEADFVNKIVEELEKALTKLETEEEE NKLRMKQAITTNTTMPFFGTNKRVKQLQEKLMMGIPTHTRLVGVVGMKGSGKTNLAEMFFEEGKCYFLRHLFFRDKIGKN MESGAKRDLLVQQFQKNLLKISNTEEKINSKLLLVLDDFSDKEDIICLFGDRGWITPGSKIVIVASDKSLVEGLVDDTYV VPGLNQKEGLACLSNHAFGDATRCDSDEGNLRTLLDYARGNPLALSTLGKELYGRGNGQWVTIHEALANKNIQDLFKSCY DCLNRPQKDAFLDVTCFFISQDHEFVKTVVDSSCGDGTSVIKDLADKFLIEITSGRVEMHGLMYALGKYLASQNQWRLLN QQDIIQALEKKLDFAGAVRGIFLDMSEVSVARALGQKPFHGMKELRYLKLYTSCTRFPESDSKLNFPEGLKFSLEKVRYL HWHKFPLMELPEDFTPKNLVDLKLPYSNIIRLWDSSNDVTNLRWVDLSHSINLQDLSGLSGAGNLQRLNLEGCTGLKELP KEIMETMTSLLYLNMRSCTSLISLPEITIKSLKTLILTNCSNLEKFQMILENIEALHLDGTALKELPESIKDRKKLVKLS LKDCTKLASVPDSVGKLQALGELILSGCSNLRSFPDVKGNMKMLRILLLDGTAINQVPQAFPSGSNGLQRLSLRGNLVIQ TIQAHIGQLFHLKFLDLQDCKNLTSIPVLPPNLQCLDAHGCDSLTTVANPLAFLNLTDQIRTTLRFSQCNNLDEVSKSYI ISYIQKKSQLMSSAFNRYSLSYVMESYTGACFPGCHVPEWFRYQEHGPVIETELRRQESQNRLIGLDLCALVSFQHCQDQ ISGFHVKCTFEFKNADGSLIRRLRCTVGGFSGTWTEPRKVESDHVFVSYTSLLEDQETEEDKKVCSSTKVSVKFEVIDDA GELVTRSVLKCGFSMVYEPEGTDHDKVSWEVGCDGPPNVADQNTDDDDEPMSFTTQEAEVIPIDGQGSNGDDEGQQQYYE EECRAKRQCIKDGSEK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |