Names & Information
Knowledge of BnaC03G0428400WE:
| Gene Name | BnaC03G0428400WE |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g47360D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:3138 nt ATGCCTCGCACTAATACCTCCACATATTCAAGCTCTATCACTCACAGTAAGAACATAGTTGATTCTGATAACCAAAACGA GCTCGCTGGACTCAAACAACGCCTTGATGAACTGAAAGAAAAGTTAGACCTTAGCCACAAGGAAACTCGCATTGTTGGGG TTTACGGGATGCCCGGAATCGGCAAAACCACCCTGGTGAAGAGATTGTATGATGAGTGGAAACACAAGTTCCAGCGACAC GTGCATTTGGTGAACATCCGTGACATGTCAAATGCGTATGGGGCGCAATCACTACAGAGGATAGTTTTGAAAAGTTTGCT TAGTGACACTTACAATGAGATAAGTGACGATATGAACTATGAAACCATGGAGAGTGAACTGCTACAGAAGAAAGTTTTTC TTGTTTTCGATGACGTGAGTAGCAAGAATCAGGTACACTCTCTTCTGGATAATCATAAATGGATTAGGAAAGGAAGCAGA GTGGTTATATCCACGCGTAACAGGACAGCGATAAGCCAACTCGAGTATACTTACGCAGTCCCAAGGTTGGATCTCGCAGA CAGCTTGAACCGATTCAGCTTTTATGCCTTTAAAGATCACAACTGTCCTCGCCCGGGAAATCTCAGGGATCTTTCCACAA AGTTCGCTGATTATGCCCGAGGTAACCCGCAAGCTCTCAAGATATTAGGTCGGGAGCTTCTCTCGGGAGATGAGGATCAC TGGTCACAGAGATTGGATACACTGGCGCAAATTCCCAGCCCGCGTATTCAAGATCTATTGAGAAAAAGTTATGATGAGCT AAGTGAGCAGCAAAGAGAAGCTTTTTTTGTTGTAGCCTGTTTCTTCAGATCAGGGGATGAGTATTACGTTAGAAGTTTAG TGGATTCAGCAGATCCTGATAATTCTACTGATGATACTGCTAGTGAAATAAGAGACCTCGCGGACAAGCTACTGATTAGC ATCTCCAGTGGGCGAGTTGAAATGCATGATTTGTGGTCTACGTTCGCTAAGAAACTTGGTTCATCCTTCTCCGCTGAAAG TAGTCAGGGAAACTATATGATTTGGGATCATGATACATTTGCTTCTATGGCGAAAAACAAAAGAATGAGATTTGTCCACC AAACAAGGAAAAATGATCAATCTAACCTCAAAAACTCGGGCAGTGACAGCGTCAAGGGTATTTCGCTGGACATGTCTGAA TTCAGTGATAAACTGACCTTAGACAATGAAATTTTCAGTAAGATGTGCAACCTACGGTACCTTAAAGTGTACAACTCCCA GTGTTCTCGAGACTGTGATGGTGATTACAAATTGAATTTCCCTGATGGACTTAAATGCGCAATGGAAAGTCTTCGGTATC TGTACTGGCTACAGTTCCCATTGGAGGAACTTCCAGAAGGGATAAGCCCGAAGAACCTTACTGAGCTCAGTCTCCCTTAC AGAAAGATAAAACGACTTTGGGAAGACAGTAAGGATACATCCAAACTCAAATGGGTCGATCTCAGTCACTCGAGTGAGCT GTGTGAAATATCTGGGTTACTAGGGGCTTCAAATCTCCAAAGACTGAATCTTGAAGGCTGCACAGACTTGACAACATTGC CGCAAGGGATGCAAGAAATGGAGAGCCTAGTTTACCTGAACATGGGAGGATGCACACGACTGGTGTCTCTTCCTAACATG AAGTTGAAATCTTTGAAAACTCTCATCTTGAGTTACTGCTCGAGCCTTGAACAATTTCCTGTGATTTCCGAGAGTCTACA TTCTCTTTACTTGCAAGCCACGGCAATTGAAGTTATTCCAGATTCAGTTGAGGACCTTCAGAAACTTTTCCTATTAAATT TGAAAGACTGCAAATCGCTGAAGAGTCTTCCCGATTGTCTTGGAAAGCTAAGAGCACTTCAAGAGCTAATACTCTCTGGC TGCTCAAAGCTAAAGATGTTTCCAGAGTTGAAGGAGAAGATGGAATCTCTGAAGATTTTACTGCTTGATGGAACAGGGAT AAAGCAGATGCCAATGTTATTGCATTGCAGTCAGTCACAAGGAAAAGCTTTTGCAAATAAGCCATTTCCAGACATTCAGA CACATTGCGGTTTAAGTAATTCCGGTCTATCATCCTCTTTGCTATCGTTATGCTTAAGTGGAAATGATCTTGAGAGCTTG CAGGATAACATCAGTCAGCTTTATCAACTTAAATGGCTTGACTTAAAGAACTGCAAGAAGCTCAAATCTATTCCAGTGCT TCCACCAAACCTCAAGTGCTTAGATGCACATGGATGCGACTCACTGGAAAAAGTTGGAAGCCCTCTAGCCCTTCTCATGG TGACAGGCCAAATCCATTGCACATTCATTTTCACTAATTGCATCAAATTGGATCAAGTTGCGATAAGTAATATCATATCT TACACTCGTAAGAAAAGCCAGTTAATATCAGATGCTTTGAATCGTTATAATGGGGGCTTTGTTTTGGAATCTTTGATTGG AACTTGTTTTCCTGGATGTGAAGTACCTGCATCGTTTGATCACCAAGGCTTTGGGTCAGTGTTAGAGCCGAAACTACCTC GGCACTGGTGTGACAGTAGGCTTACTGGGATAGCTTTATGCGCTGTTATAATGTTTCCGGACTGCCACCATCAAAACAAC CGTTTCTTGGTGAAATGCACTTGTGAATTCAAAACTGATGATGGGCCATGTATCAGTTTTACTTCCATTGTTGGAGGTTG GAGCATACCAGGTGATGATCCACGAAAGATTGACTCTGCTCATGTTTTTATTGGCTATACAAGCTGGCTATATATCAACA AATGTCACGTGGAAGACCATGGGAAAGGATGTATTCCTTATTTGGCTTCTCTCAGATTTCAGGTGACTGATAGTTCAGGT GTGGTAGCAAAATGCAAAGTGCTAAAATGTGGCTTTAGTTTGGTATGTACACCAAATGATATCGATGATATCTCTCGGGA GAAGATGGGTGATATCTCTCCACAGAATATGGGGAATGCGCTAAACAAAGAAAATTCAAATAAAACTTCAAGAAATGATT ATGATTTCTGGTATCCATCAAACTGTGGTATGACTTCGAGAAATGATGAACATTTTCACGATGAAGAACTTGCAGAAGCA AACATCTCCAAAACTTGA |
| AA seq | Len:1046 aa MPRTNTSTYSSSITHSKNIVDSDNQNELAGLKQRLDELKEKLDLSHKETRIVGVYGMPGIGKTTLVKRLYDEWKHKFQRH VHLVNIRDMSNAYGAQSLQRIVLKSLLSDTYNEISDDMNYETMESELLQKKVFLVFDDVSSKNQVHSLLDNHKWIRKGSR VVISTRNRTAISQLEYTYAVPRLDLADSLNRFSFYAFKDHNCPRPGNLRDLSTKFADYARGNPQALKILGRELLSGDEDH WSQRLDTLAQIPSPRIQDLLRKSYDELSEQQREAFFVVACFFRSGDEYYVRSLVDSADPDNSTDDTASEIRDLADKLLIS ISSGRVEMHDLWSTFAKKLGSSFSAESSQGNYMIWDHDTFASMAKNKRMRFVHQTRKNDQSNLKNSGSDSVKGISLDMSE FSDKLTLDNEIFSKMCNLRYLKVYNSQCSRDCDGDYKLNFPDGLKCAMESLRYLYWLQFPLEELPEGISPKNLTELSLPY RKIKRLWEDSKDTSKLKWVDLSHSSELCEISGLLGASNLQRLNLEGCTDLTTLPQGMQEMESLVYLNMGGCTRLVSLPNM KLKSLKTLILSYCSSLEQFPVISESLHSLYLQATAIEVIPDSVEDLQKLFLLNLKDCKSLKSLPDCLGKLRALQELILSG CSKLKMFPELKEKMESLKILLLDGTGIKQMPMLLHCSQSQGKAFANKPFPDIQTHCGLSNSGLSSSLLSLCLSGNDLESL QDNISQLYQLKWLDLKNCKKLKSIPVLPPNLKCLDAHGCDSLEKVGSPLALLMVTGQIHCTFIFTNCIKLDQVAISNIIS YTRKKSQLISDALNRYNGGFVLESLIGTCFPGCEVPASFDHQGFGSVLEPKLPRHWCDSRLTGIALCAVIMFPDCHHQNN RFLVKCTCEFKTDDGPCISFTSIVGGWSIPGDDPRKIDSAHVFIGYTSWLYINKCHVEDHGKGCIPYLASLRFQVTDSSG VVAKCKVLKCGFSLVCTPNDIDDISREKMGDISPQNMGNALNKENSNKTSRNDYDFWYPSNCGMTSRNDEHFHDEELAEA NISKT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |