Names & Information
Knowledge of BnaC03G0471100GG:
| Gene Name | BnaC03G0471100GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance RPP8-like protein 4 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPH8A OS=Arabidopsis thaliana GN=RPH8A PE=3 SV=1 |
| NT seq | Len:3078 nt ATGTTTCCAAATAGGATTGTTGTAAAGGTAAAGTCTATTATCCCATTGCTTCTCAATCATCTCTTTCTTCCGAAGAACGC CGCTACCACCAGAGAAGAGAGTGAGCTGATTCAGGATAGGAGAATAGTTATGGCTGAGGAATTTGTGTCGTCCGGAGTGC AGAAACTCTTGGGCGTCGTGAATCGAGAAACTAAGCGATTGCGTGGAGTTCACGAGCAAGTTGCTGATTTAATATGTCAG AAGAGAGCGCTACAATCATTTTTGGAAGATGCAGATGCCAAGAAATATGGGAGTGAAAGATTGAGAAACCTCTTGGAAGA TGTAAAGGACGTTATTGAGGATGCTGAAGCTACAGAAGATTCCTATCTTTTGAAAGAACGTAGTGGAGAAGAAAAAGGGA TCATGACGTGTGTGAAAAGACATTCTCGCTTCTTATTTAATCGCCGGAAATTTGCTACACATATTGAAGGCATAAATAAG AGAATCTCTAAGCTGATTGCCCGAATGTGTGATTTTGGAATACACCAGATCATCGATGGTAACTGTTCAGAGTCTTCGCA AGAGAGACAAAGGGTGCAACGGGAGACCCAACAAACATTTCCTGGAAGTTTTGAAAATAATCTTGTGGGAGTGGAACAAA GTGTTAAAACACTGGTTGGTCACTTGGTGGATAATAATGATAACATCCAAGTGGTTTCCATATCCGGAATGGGTGGTATT GGTAAAACAACACTAGCCAAACAAGTTTTTCAGCATGATGATGTACGACGTCATTTTAAAGGATTTGCATGGATCTATGT TTCGCAAGAGTTCACTCAAAAGGACATTTGGCAAAGGGTATTGCAAGATCTTAGACCACATGATGGAGACGTTAAACAGA TGGATGAGGGTACTCTTCAAGGAAAACTCTGTCAATTATTGGAAACGTCAAGATATTTGATTGTCCTCGATGATGTATGG AAAGATGAAGCTTGGGACAGAATCAAAGCGGCGTTTCCCCTAAAAAGAGGTGGTTCTAAGGTGATACTTACTTCTCGCAA TGAAGGTGTGGGTTTACACGCAGATCCAACATGTTTTCCCTTTAGACCAAGAACCTTTACCCTCGAAGAAAGTTGGCAGC TGTGTAAGAGCATAGTATTCCCTAAACAAGATGCAACTGAATTTGTTGTTGATGAAGAACTAGAAGCCATGGGTAAGAAA ATGATGCTCACACATTGTGGAGGACTACCTTTGGCCGTTAAAGTGCTAGGAGGCTTGTTAGCTAAGAAACCTACGGTTTC TGAATGGGAAAAAGTATGTGACAAAGTTGCACGAGAATCTGGTTTAGATGATAAAAAACTCAGTTCAGTTTACCGAGTAT TGTGTCTGAGTTATGAAGATCTGCCAATGCATTTGAAGCATTGCTTCCTTTACCTAGCTCATTTCCCCGAAGATTACAAG ATAGATTTGGAGAAATTGTTCCTTTGTTGGGCTGCAGCAGGAATAATAAAATCATTTCATGATGGAGATACCACCATTCG AGAAAGTGGGGAAGACTATCTCGAAGAGCTTGTAACGAGAAATATGGTTATAGTTGTAAAAAGCAATTCGAGTTGGGAGA CTCATTTCCCTAAAGACTACAAAATGGACGTTGAGGAATTATTCACAAGCTGGGGTGCAGAAGGAATAATAAAGTCAGTT TGGAATGGAGCGACCATTCAAGAAAGTAAAGAAGACTACCTTGAAGACCTAGTTAGGAGAAATATGGTCACTATTGTAAA TAGCTATTCGAGCTGGGGATCGGGTTACTGTCAGATGCATGACATCATGAGAGAAGTATGTTTATTAAAATCCAAAGAAG AGAACTTTGTTGACTTCATCAACGCACATACTTCCACCACTACCATCAATGCTCACATTCCTAGCAGATCTCGAAGACTC GTTGTACATGGTGGCAGTGCACTTCATATGCTGGGACGTAAAAAAAATAAAAGGGTTAGATCTATTTTGTGTTTTGGAGC TGAGGGAAACTTGTGGAAGCAGTCATCTCGAGGATTCCGAAGTTTACCATTACTCAGGATGTTAGATCTGAATGGAGCCA AGTTTAAAGGAGGGGAGTTACCTTCCAGTATTGGGAAGCTCATCCACTTGAGATTCTTGAGTTTACGTGGGGCTTGCGTA TCTAAACTACCTCATTCCCTAGGGAACCTAAAGTTTCTGCTCTATTTGAACTTGTGCGTCAATCAGGTAGTTCATGTCCC AAATGTTTTAAAAGAGATGCTAGAGTTGAGGTACCTTTTGCTACCAGCTTTTATGGACGATAAAACGAAGTTGGAATTGG CTGCTCTAGTAAAGCTGGAGACGTTGTGGTATTTCCCAACGAAAAACATCAGTGTGACAGACCTCCTATGTATGACTAGG CTCAGGACTCTCCGTGTATATCTCAATGGTGGGTGTACTTCTGAAACACTATCTTCATCTCTTCGTGGATTAAGTAAGCT GGAGCAGTTTACTTTAGTTGCTTCTGACAAATCACATGTTTATAACGGGGGAGATTTCACTAGGGACTGCAATCGTCTAA AGAGTTTAACGCTGGTCATGCATATGCCAAGGTCTCTTGAGCAAGATCAATTCCCTCCTTTACTTGCACACATATGTCTG CAATATTGCAGGATGGAGGAGGATCCAATGCCGGTTCTTGAAAAGTTGCTTCATCTGGAGTCGGTTGATTTATCAGATAG TTGCTTCGTCGGGAGGAGAATGGTGTGCTCGGAATCTGGATTCCCTCGGTTATGTGCTCTACAAATATCTAAACAAGAAG AACTGGAAGAGTGGATAGTAGAAGAAGGGTCGGTGCCATGTCTTCGTACTTTGACTATAGAGAAATGTGAAAAGTTGAAG GAGCTACCTGACGGGTTGAAGTATATAACTTGCTTGAAGGAACTGAAGATTCAAAGAATGAACAAGGATTGGACGAAGAA ATTGGAACCAGGTGGGGAACACTATACTGCAGAGTCCAACACATTCCTGATGTTCAGTTTTTCAATTGTATCGGCGAATA AGAATAATAAAGTCTACCAGGTGAGAATCTTGACCTGA |
| AA seq | Len:1026 aa MFPNRIVVKVKSIIPLLLNHLFLPKNAATTREESELIQDRRIVMAEEFVSSGVQKLLGVVNRETKRLRGVHEQVADLICQ KRALQSFLEDADAKKYGSERLRNLLEDVKDVIEDAEATEDSYLLKERSGEEKGIMTCVKRHSRFLFNRRKFATHIEGINK RISKLIARMCDFGIHQIIDGNCSESSQERQRVQRETQQTFPGSFENNLVGVEQSVKTLVGHLVDNNDNIQVVSISGMGGI GKTTLAKQVFQHDDVRRHFKGFAWIYVSQEFTQKDIWQRVLQDLRPHDGDVKQMDEGTLQGKLCQLLETSRYLIVLDDVW KDEAWDRIKAAFPLKRGGSKVILTSRNEGVGLHADPTCFPFRPRTFTLEESWQLCKSIVFPKQDATEFVVDEELEAMGKK MMLTHCGGLPLAVKVLGGLLAKKPTVSEWEKVCDKVARESGLDDKKLSSVYRVLCLSYEDLPMHLKHCFLYLAHFPEDYK IDLEKLFLCWAAAGIIKSFHDGDTTIRESGEDYLEELVTRNMVIVVKSNSSWETHFPKDYKMDVEELFTSWGAEGIIKSV WNGATIQESKEDYLEDLVRRNMVTIVNSYSSWGSGYCQMHDIMREVCLLKSKEENFVDFINAHTSTTTINAHIPSRSRRL VVHGGSALHMLGRKKNKRVRSILCFGAEGNLWKQSSRGFRSLPLLRMLDLNGAKFKGGELPSSIGKLIHLRFLSLRGACV SKLPHSLGNLKFLLYLNLCVNQVVHVPNVLKEMLELRYLLLPAFMDDKTKLELAALVKLETLWYFPTKNISVTDLLCMTR LRTLRVYLNGGCTSETLSSSLRGLSKLEQFTLVASDKSHVYNGGDFTRDCNRLKSLTLVMHMPRSLEQDQFPPLLAHICL QYCRMEEDPMPVLEKLLHLESVDLSDSCFVGRRMVCSESGFPRLCALQISKQEELEEWIVEEGSVPCLRTLTIEKCEKLK ELPDGLKYITCLKELKIQRMNKDWTKKLEPGGEHYTAESNTFLMFSFSIVSANKNNKVYQVRILT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | Disease resistance protein RPH8A, putative; K13457 disease resistance protein RPM1 (A) |