Names & Information
Knowledge of BnaC03G0473200ZS:
| Gene Name | BnaC03G0473200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g44460D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance RPP8-like protein 4 OS=Arabidopsis thaliana GN=RPP8L4 PE=2 SV=1 |
| NT seq | Len:2910 nt ATGTTTCCAAATAGGATTGTTGTAAAGGTAAAGTCTATTATCCCATTGCTTCTCAATCATCTCTTTCTTCCGAAGAACGC CGCTACCACCAGAGAAGAGAGTGAGCTGATTCAGGATAGGAGAATAGTTATGGCTGAGGAATTTGTGTCGTCCGGAGTGC AGAAACTCTTGGGCGTCGTGAATCGAGAAACTAAGCGATTGCGTGGAGTTCACGAGCAAGTTGCTGATTTAATATGTCAG AAGAGAGCGCTACAATCATTTTTGGAAGATGCAGATGCCAAGAAATATGGGAGTGAAAGATTGAGAAACCTCTTGGAAGA TGTAAAGGACGTTATTGAGGATGCTGAAGCTACAGAAGATTCCTATCTTTTGAAAGAACGTAGTGGAGAAGAAAAAGGGA TCATGACGTGTGTGAAAAGACATTCTCGCTTCTTATTTAATCGCCGGAAATTTGCTACACATATTGAAGGCATAAATAAG AGAATCTCTAAGCTGATTGCCCGAATGTGTGATTTTGGAATACACCAGATCATCGATGGTAACTGTTCAGAGTCTTCGCA AGAGAGACAAAGGGTGCAACGGGAGACCCAACAAACATTTCCTGGAAGTTTTGAAAATAATCTTGTGGGAGTGGAACAAA GTGTTAAAACACTGGTTGGTCACTTGGTGGATAATAATGATAACATCCAAGTGGTTTCCATATCCGGAATGGGTGGTATT GAGTTCACTCAAAAGGACATTTGGCAAAGGGTATTGCAAGATCTTAGACCACATGATGGAGACGTTAAACAGATGGATGA GGGTACTCTTCAAGGAAAACTCTGTCAATTATTGGAAACGTCAAGATATTTGATTGTCCTCGATGATGTATGGAAAGATG AAGCTTGGGACAGAATCAAAGCGGCGTTTCCCCTAAAAAGAGGTGGTTCTAAGGTGATACTTACTTCTCGCAATGAAGGT GTGGGTTTACACGCAGATCCAACATGTTTTCCCTTTAGACCAAGAACCTTTACCCTCGAAGAAAGTTGGCAGCTGTGTAA GAGCATAGTATTCCCTAAACAAGATGCAACTGAATTTGTTGTTGATGAAGAACTAGAAGCCATGGGTAAGAAAATGATGC TCACACATTGTGGAGGACTACCTTTGGCCGTTAAAGTGCTAGGAGGCTTGTTAGCTAAGAAACCTACGGTTTCTGAATGG GAAAAAGTATGTGACAAAGTTGCACGAGAATCTGGTTTAGATGATAAAAAACTCAGTTCAGTTTACCGAGTATTGTGTCT GAGTTATGAAGATCTGCCAATGCATTTGAAGCATTGCTTCCTTTACCTAGCTCATTTCCCCGAAGATTACAAGATAGATT TGGAGAAATTGTTCCTTTGTTGGGCTGCAGCAGGAATAATAAAATCATTTCATGATGGAGATACCACCATTCGAGAAAAA AGTAAAGAAGACTACCTTGAAGACCTAGTTAGGAGAAATATGGTCACTATTGTAAATAGCTATTCGAGCTGGGGATCGGG TTACTGTCAGATGCATGACATCATGAGAGAAGTATGTTTATTAAAATCCAAAGAAGAGAACTTTGTTGACTTCATCAACG CACATACTTCCACCACTACCATCAATGCTCACATTCCTAGCAGATCTCGAAGACTCGTTGTACATGGTGGCAGTGCACTT CATATGCTGGGACGTAAAAAAAATAAAAGGGTTAGATCTATTTTGTGTTTTGGAGCTGAGGGAAACTTGTGGAAGCAGTC ATCTCGAGGATTCCGAAGTTTACCATTACTCAGGATGTTAGATCTGAATGGAGCCAAGTTTAAAGGAGGGGAGTTACCTT CCAGTATTGGGAAGCTCATCCACTTGAGATTCTTGAGTTTACGTGGGGCTTGCGTATCTAAACTACCTCATTCCCTAGGG AACCTAAAGTTTCTGCTCTATTTGAACTTGTGCGTCAATCAGGTAGTTCATGTCCCAAATGTTTTAAAAGAGATGCTAGA GTTGAGGTACCTTTTGCTACCAGCTTTTATGGACGATAAAACGAAGTTGGAATTGGCTGCTCTAGTAAAGCTGGAGACGT TGTGGTATTTCCCAACGAAAAACATCAGTGTGACAGACCTCCTATGTATGACTAGGCTCAGGACTCTCCGTGTATATCTC AATGGTGGGTGTACTTCTGAAACACTATCTTCATCTCTTCGTGGATTAAGTAAGCTGGAGCAGTTTACTTTAGTTGCTTC TGACAAATCACATGTTTATAACGGGGGAGATTTCACTAGGGACTGCAATCGTCTAAAGAGTTTAACGCTGGTCATGCATA TGCCAAGGTCTCTTGAGCAAGATCAATTCCCTCCTTTACTTGCACACATATGTCTGCAATATTGCAGGATGGAGGAGGAT CCAATGCCGGTTCTTGAAAAGTTGCTTCATCTGGAGTCGGTTGATTTATCAGATAGTTGCTTCGTCGGGAGGAGAATGGT GTGCTCGGAATCTGGATTCCCTCGGTTATGTGCTCTACAAATATCTAAACAAGAAGAACTGGAAGAGTGGATAGTAGAAG AAGGGTCGGTGCCATGTCTTCGTACTTTGACTATAGAGAAATGTGAAAAGTTGAAGGAGCTACCTGACGGGTTGAAGTAT ATAACTTGCTTGAAGGAACTGAAGATTCAAAGAATGAACAAGGATTGGACGAAGAAATTGGAACCAGGTGGGGAACACTA TACTGCAGAGTCCAACACATTCCTGATGTTCAGTTTTTCAATTGTATCGGCGAATAAGAATAATAAAGTCTACCAGGTAA ATCTTTTTGGTGTTTATGTCCATTTCGTTGGTTATGTATCCTTTTTGGCGTTAGTTGTGAAAGTCACGTTAGACAGTCTC AACTATATTATATTATATACATTGATCTAA |
| AA seq | Len:970 aa MFPNRIVVKVKSIIPLLLNHLFLPKNAATTREESELIQDRRIVMAEEFVSSGVQKLLGVVNRETKRLRGVHEQVADLICQ KRALQSFLEDADAKKYGSERLRNLLEDVKDVIEDAEATEDSYLLKERSGEEKGIMTCVKRHSRFLFNRRKFATHIEGINK RISKLIARMCDFGIHQIIDGNCSESSQERQRVQRETQQTFPGSFENNLVGVEQSVKTLVGHLVDNNDNIQVVSISGMGGI EFTQKDIWQRVLQDLRPHDGDVKQMDEGTLQGKLCQLLETSRYLIVLDDVWKDEAWDRIKAAFPLKRGGSKVILTSRNEG VGLHADPTCFPFRPRTFTLEESWQLCKSIVFPKQDATEFVVDEELEAMGKKMMLTHCGGLPLAVKVLGGLLAKKPTVSEW EKVCDKVARESGLDDKKLSSVYRVLCLSYEDLPMHLKHCFLYLAHFPEDYKIDLEKLFLCWAAAGIIKSFHDGDTTIREK SKEDYLEDLVRRNMVTIVNSYSSWGSGYCQMHDIMREVCLLKSKEENFVDFINAHTSTTTINAHIPSRSRRLVVHGGSAL HMLGRKKNKRVRSILCFGAEGNLWKQSSRGFRSLPLLRMLDLNGAKFKGGELPSSIGKLIHLRFLSLRGACVSKLPHSLG NLKFLLYLNLCVNQVVHVPNVLKEMLELRYLLLPAFMDDKTKLELAALVKLETLWYFPTKNISVTDLLCMTRLRTLRVYL NGGCTSETLSSSLRGLSKLEQFTLVASDKSHVYNGGDFTRDCNRLKSLTLVMHMPRSLEQDQFPPLLAHICLQYCRMEED PMPVLEKLLHLESVDLSDSCFVGRRMVCSESGFPRLCALQISKQEELEEWIVEEGSVPCLRTLTIEKCEKLKELPDGLKY ITCLKELKIQRMNKDWTKKLEPGGEHYTAESNTFLMFSFSIVSANKNNKVYQVNLFGVYVHFVGYVSFLALVVKVTLDSL NYIILYTLI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | calcium sensing receptor, chloroplastic; K13457 disease resistance protein RPM1 (A) |