Names & Information
Knowledge of BnaC03G0485300ZS:
| Gene Name | BnaC03G0485300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At1g59620 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=3 |
| NT seq | Len:1851 nt ATGGAAGGTTTTATTTACTTCTCGCAACGAGAATGTTGCACTACGCGCAGATACAGAATGCGTAACTTTCAAACTAAAGT GCTTAACCCCCAAAAAAGTTGGACACTTTTTCGGAGGATAGCTTTTCCTAGGAAAGACACATCAGAGTTTAAGGTTGATG TAGACATGTTAGAGATGGGCAAGAAAATGATAAAACATTGTGGAGGACTACCATTGGCTGTCAAAGTGTTAGGAGGCTTG TTAGCTGCCCAACCCACTTTAAGTGAATGGAAAAGGGTTTATGAGAATATTGGATCCGACTTGGCAGGAAGAACTAGTTT TAATGATGGATATTGCAATTCAGTTCATAGTGTACTGTCTCTAAGCTTCGAAGAGTTGCCTACTTTTTTGAAACATTACT TTCTCTACCTCGTCCATTTTCCCAGAGATTATCAAATCAGTGTGGAGAATTTATCCTATTATTGGGCTGCAGAAGGAATA CCAAGGCCGAGTTATTCCGAGGGAGCGACAATTGAAGAAGTCGCAGAGGGGTACATAGCAGACTTGGTGAAGAGAAACAT GGTTATTTCTGAAAAAAATGCTTCTACTTCAAAATTTGAAACATGTCACTTGCATGACATGATGAGAGAAGTTTGTCTGC TTAAAACTGAAGAAGAGAACTTCCTACAAATTGTTCACGGTTCATCGTCAACTGCATACTCTAAATCTTATCGTAAATCT CGCAGACTCGCTGTACATCGTCCTGATGAAACATTTAGTATGGAGAAGGAAGTGAATAGTCCAAGCCTTAGGTCTCTCTT GTTTATTTGGGGTTCAAACTGGAAGGCATCAGGTTTATTCTTTGAAAGGCTACAATTGATGAGGGTTTTGGATCTCTCTA GAGCGCATTTTGAAGGAGGGAAGATACCATCTAGCATTGGAAAGCTCATCCATTTAAGATATCTAAGTTTATATAAAGCG CATGTATCTCGTCTACCTTCTTCAATGCGGAATCTGAAGCAGCTGGTCTATTTAAACTTATGCTTATATGCGAGATATCC ACTTTATGTGCCAAACATTTTTAAAGGGATGCAAGAATTGAGATACCTTTCATTACCTTCAGGGAGAATGCATGATAAGA CAAAGTTGGAATTAGGTAACCTAATCAACTTGGAGACGTTGAAGTTCTTCTCAACAAAGCATAGCAGTGTGACGGATCTT CACTGTATGACAAGGCTAAGGAATCTCTTAATCATATTCAACGAAGAGGGGTGTACTATGGAAACGCTATCTTCGTCTCT AAGTAAACTGAGACATCTGGAAAGTCTTAGCATAGATTACAATCATTTCAAGGTTTTTGCTCCCACAGATGATGAAAAAG GATTTGTTTTGGGTTGTATCCATCTAAAAAAGCTGGAGTTGTGTGTATACATGCCAGGGTTACCTGATGAGAAGCACCTT CCTTCTCACCTTACAACCATATCTCTAACTGGTTGTCGTTTGAAAGAGGATCCAATGCTGATTCTAGAGAAGTTGTCACA CTTGAAAGAGGTTGATTTAGGGAAAAGATCATTCTGTGGGAAGAGAATGGTTTGCTCGAGGGGTGGGTTTCCTCAGTTGC AGATGCTATTATTTCTTGGATTACATGAGTGGGAAGAGTGGATAGTAGAAGAAGGTTCAATGCCCCTTCTTCATACTCTC GATGTTAGTTATTCTGCAAAATTAAAAGAGGTTCCTAATGGGATACAATTTCTCACTTCTTTAAAAGATCTGTGTATGGG AGAGGAATGGAAGAAGAGACTATCAGAAGGAGGAGAAGATTATTACAAAGTCCAACACGTCATTTCTGTTCGGTTTGGAG GGAAAGGTTGA |
| AA seq | Len:617 aa MEGFIYFSQRECCTTRRYRMRNFQTKVLNPQKSWTLFRRIAFPRKDTSEFKVDVDMLEMGKKMIKHCGGLPLAVKVLGGL LAAQPTLSEWKRVYENIGSDLAGRTSFNDGYCNSVHSVLSLSFEELPTFLKHYFLYLVHFPRDYQISVENLSYYWAAEGI PRPSYSEGATIEEVAEGYIADLVKRNMVISEKNASTSKFETCHLHDMMREVCLLKTEEENFLQIVHGSSSTAYSKSYRKS RRLAVHRPDETFSMEKEVNSPSLRSLLFIWGSNWKASGLFFERLQLMRVLDLSRAHFEGGKIPSSIGKLIHLRYLSLYKA HVSRLPSSMRNLKQLVYLNLCLYARYPLYVPNIFKGMQELRYLSLPSGRMHDKTKLELGNLINLETLKFFSTKHSSVTDL HCMTRLRNLLIIFNEEGCTMETLSSSLSKLRHLESLSIDYNHFKVFAPTDDEKGFVLGCIHLKKLELCVYMPGLPDEKHL PSHLTTISLTGCRLKEDPMLILEKLSHLKEVDLGKRSFCGKRMVCSRGGFPQLQMLLFLGLHEWEEWIVEEGSMPLLHTL DVSYSAKLKEVPNGIQFLTSLKDLCMGEEWKKRLSEGGEDYYKVQHVISVRFGGKG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | probable disease resistance RPP8-like protein 2; K19613 leucine-rich repeat protein SHOC2 (A) |