Names & Information
Knowledge of BnaC03G0496200GG:
| Gene Name | BnaC03G0496200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g47400D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RRS1 OS=Arabidopsis thaliana GN=RRS1 PE=2 SV=1 |
| NT seq | Len:4413 nt ATGGATTATGGTGATTGTGAACTTGTTGAAGAAATTGCTAGGGATGTGTACGAAAAGATGTTTCCTACCAAACGAATTGG AATCTATTCAAGGTTGCTTGAGTTGGAAAACTTTCTTTGCAAGCAACCATGGGGTGTCCGCAGCATTGGAATTTGGGGCA TGCCAGGCATAGGCAAAACTACACTTGCTAAAGCAGCATTTGACCAATTTTCTGGTGATTATGAAGTTTCTTGTTTCATC AAAGATTTCGACAAAGAATTTCATATGAAAGGAATTTATTATTTGCTGCAAGAATACTTAGGGGGAACTGTCAGGGAAGA GCTTGATATAAACAATTATGTTATGGAGCCAGAACCAAAAAGAGTTCTTATTGTCCTAGATAATGTCTGCAAACCTCTGG ATGCAGATGCTTTTCTGAATGGGTTTGATTGGTTTGGTCCAGGGAGTTTGATAATCATAACTTCTAGAGACAAACAAGTA TTCGTGCAATGTGGCGTCAATCAAATATATGAGGTTCAAGGTTTCAATGTAGACGAGGCAAAGAAACTATTCTCATCTGG AATAGATTGGAGCAAAAGGAGTGGTTTGGATACTCTTGAACCTTATTTGAGGTCAGTGATACAATATTCTAGTGGAAATC CTTTAGCTCTCAGCTTTTATGGAAAAGAGCTGCTACCCAAGAATATAGAAGAAATAGAGACAGAGCTCCTCAGTCTGAAG CAAATTCCTCCGCCTTTGATTATGGAAGCAATCAAAATCAGCTACTATACACTTAATGACAGCGAGAGGACTATGTTTCT AGACATTGCTTGTTTCTTCAGAGGAGAAAATGTGGATTACGTGATGCAACTGTTTGAAGGGTGTGGTTTCTTTCCACATG TTGGAATATCTGTCCTAGTTGATAAATGCCTGGTGACTATTTTAGAAGGCAAGATGCAAATGCATGATCTCATTCAGGTC GTTGCAAAGGAGATTTCCAATGAAGAGACTGTACAGCTAGAAAGACATTGCAGATTATGGGACGCTTCAATTATTCAATC TCTGCTAGAAGATAAAGAACCCAAATCAGTTGGGGAGTCTATGGGTATTGAAGATATTGAAGCCATATTTCTAGATATAT CCAACTTGAAATTTTATGTCAATCCTAATGCTTTCAAGAGTATGCGTAATCTTAGATTTTTAAAGATATACAGCTCCAAT CATGGAAAGCATCAAGGACTTGGCATATATAAATCTCTTGAGTCTCTTCCAAATGAGCTAAGGCTACTCCATTGGGAGAA TTACCCTCTAAACTACTTGCCCCATGATTTTGATCCTAGCCACCTTGTTGAACTTAACATGCCTTACAGTAAACTTGAAA AGCTTTGGGATGGAATAAAGAATCTGGAGATGCTAAAGACGATCAAGCTATGTCATTCCCAAGAACTTGTTGAAATTAAC GATATTTCAAATGCTCAAAATGTTGAGGTAATTGATCTCCAAGGCTGTATAAAATTTCCGAGTTTTCCAGCCACGGGTCA TCTACAACATCTCCGAGTTATTAATCTTTCTGGTTGCGTGGAGATCAAAAGCTTTACAGAGGTTCCACCAAATATCGAGG CATTGTATCTCAGTGGAACTAGTATAAGAGAGATACTAACATTAACTACGGGGCTCACCTCGCAATGTAGGAACTGCATA GATTGTCTTCATGTCCAAACTTTGGATTTTCTTAGAGTTCTTGATCTCTCCGGCTGCTCAAGGCTAGAAGAGATTCAGTG TTTCCCAAGGAACATGAAAGAATTAAATCTTTCTGATACTGCGATCAGAAAAATTCCATCATCAATCGGTCATCTCACTG CACTTGAGGTACTGAATTTAACTAACTGCAAAAGGCTTCAACACTTGCCCATGGGAATGAGTAACTTGACCTCTCTTGTT AAGCTCATGCTAACTGGCTGCTCAAAGCTTGAGCATATTCAAGATTTGCCAACGGGCCTGAAAGAGCTATATCTTGCTGA GACGGCTATTAGAGAACTGCCATCGTCAATTTGTCATCTCTCTGAACTTGTTGTATTCGATGCCGAGAACTGCCAAAAGC TTCAAGATTTGCCTACAGCAATGGGTAACTTAAACTCTCTATCTATGCTAAAGTTATCTGGCTGCTTAGAGCTTGAGGAC ATCCACGATCTTCCACGGAACCTAAAGATTTTGAATCTAGCTGAGACTCCTATAAGGAAAATGCCATCATCATTTGAAGA TCTCACTGAACTAATTTCAGTAGATTTAAATCATTGCAAAAGGCTGCAACATCTTCAAATGGGATCTTACAAGTCCTTAG TCAGGATTGAGCTTTCTGGCTGCTCAGACCTGGATTCTATTATTGGTTTCTCACTTCAAGACATGGGACAACATCATATA GATGGGATTGAGAAAGTGAGGTTATGTGGGCCTCCTCCATGTAATGTCATCTTTATTTGGGAGAACTGGAGAACATTTCA TGTCATACCAGGGGAGAAAATGGGCTCCAAATGTTGTATGAAGCTTACGCCATTTTTAGCCTCGCCATATCGATCGAAGC TGCCTTCTTCATTTTTATCCTCCTTGTACGCATTGGTGTCGTTGTTGCTCAGTAATGCCAACCTACTCGACATACCTCAA GAGATATGTCATTTTCCTTCACTAAAGACATTGGATCTCAGCGGAAACGACTTTAGCAAACTTCCTAAAAGCATGAAGCA GCTTTGTAAGTTGGAAAGTCTTATATTATGTCGCTGCAAAAAACTCAAATCACTCCCAGAGCTTCCCCAATGTCTAGAGA CTTTGAATGCACATGGTTGTGTGTCTCTCAAGAATGTTCATAGGAGTTTCGAGCAGTTTCCTAGACATTGCACGTTCAGC AATTGTTTTAATATTTCTTCAGACTCTGTCAAGAATATTTTAGACAATAGTATAGCTCACATGGCCAGACACCCTTGCCA GGTACCTCTCTCTCTCTCTCTCTGCACATTTTCATATATATATATATATATAATTTCTTTTGCCTTTCTGAAACAGAATC TCATCAAAGCACAAGTATCCAGTTTCTCTGTTCCGGCATTCACTGGTCTGAATTCCATCTTTCACTTGCAACGAAGTTCA TCAGTGAAGATAAGGATTAATCATATTATAAAGCTTTTGGGGTTTAAAATAACGGTTGTAGTTGCATTTTGGGATGACTC TCGCAATGCTGCTAGTTTCGGTATCAGGTGTGTCTGTAGATGGAAAAACAAGAAAGGTCTCTCACGTCGCTTAGAAAGAG TTTTCTACTGCTGGACTCCAGAGGAAGTTGCTCAAAGTGTTCTGGAAAATCACATGTTTGTCTTCTGTGATGTCTCAATG CATCTGGGTATTGCTGATGGGAATGACCATGATATATTGGATGATCTAATTGTATTTGAGTTCGTTCCTGTTAACGGGAA GAACAGGGTTCTTGATGATTGTTGCACTATTACAGAATGTGGAGTAGATGTAATTACTGAAAAAACAGACAAAGCAAGTC ATGACTTGAGGCGGCCAGGTTCTGCCTTAGACTCCATGGAGCTTTCCTCTTATGTGTTACCACAATTCAAGAAGCGGAAA CGAAGTTTCTCAGGATCAAAAGACATTGAAATGGAACACGACAGGTTGATCTTATCAGAAACAAATAGAAGGGTAGCTTC TGATATGGCTCCTCTTTCTTCATCTTCTTTGTCTCCTCGTCCGAGATACGACGTTTTCTTGAGCTTCTATGAAGATGTCC GAAGAACATTTGTCAGCTATCTAATCAAGGAATTTAAATGGCTAGGAATCACTGCAGTATACAGCGGATTAGTGGGATGC GAGGTGACAAGTCATCCTGAGGTCACAGAAGCCATTAAGAAATCAAGGATATCAGTTGTCATTCTTTCAAAAAATTATGT TTCTTCAAGTAGGTGCTTGAATGAATTGGTGGAGATCATAACATGGAGTAAAGAAACATGGGGATACCGAGTGATACCAG TTTATTACGAAGTGGATCCATCTTATGTAAGGAAGCAGACCAAAACTATTGGAAAGGGCTTGGTGGGAACATTTTTGGGG AAAGTAGAGAAGCCAGAGGTGAAATGGAGGAGAGCTTTGACATACATTGTCGATGAAGCTGGTGAATCTTCCCAGGACTG GAATGATGACACGAAAATGATTGAGAAGATTGCTACTAATGTTTCAAAACAAGTAGATGTCATGGAATCAAATGGATTTG ATACAGTGTTTATTAAGGAGACAGAGGACATTGAAGAGTTTGAGACAAACATCTGGGATAAGTTAGATGGTGTGCACATC ATCCCGAGCTGGTATATGTATGCATTCTCTTTGATTTATCTGTGTCTTCTTGCTTCCCAAAGTGATTACATTACGCCTTC TGTATATATATGA |
| AA seq | Len:1471 aa MDYGDCELVEEIARDVYEKMFPTKRIGIYSRLLELENFLCKQPWGVRSIGIWGMPGIGKTTLAKAAFDQFSGDYEVSCFI KDFDKEFHMKGIYYLLQEYLGGTVREELDINNYVMEPEPKRVLIVLDNVCKPLDADAFLNGFDWFGPGSLIIITSRDKQV FVQCGVNQIYEVQGFNVDEAKKLFSSGIDWSKRSGLDTLEPYLRSVIQYSSGNPLALSFYGKELLPKNIEEIETELLSLK QIPPPLIMEAIKISYYTLNDSERTMFLDIACFFRGENVDYVMQLFEGCGFFPHVGISVLVDKCLVTILEGKMQMHDLIQV VAKEISNEETVQLERHCRLWDASIIQSLLEDKEPKSVGESMGIEDIEAIFLDISNLKFYVNPNAFKSMRNLRFLKIYSSN HGKHQGLGIYKSLESLPNELRLLHWENYPLNYLPHDFDPSHLVELNMPYSKLEKLWDGIKNLEMLKTIKLCHSQELVEIN DISNAQNVEVIDLQGCIKFPSFPATGHLQHLRVINLSGCVEIKSFTEVPPNIEALYLSGTSIREILTLTTGLTSQCRNCI DCLHVQTLDFLRVLDLSGCSRLEEIQCFPRNMKELNLSDTAIRKIPSSIGHLTALEVLNLTNCKRLQHLPMGMSNLTSLV KLMLTGCSKLEHIQDLPTGLKELYLAETAIRELPSSICHLSELVVFDAENCQKLQDLPTAMGNLNSLSMLKLSGCLELED IHDLPRNLKILNLAETPIRKMPSSFEDLTELISVDLNHCKRLQHLQMGSYKSLVRIELSGCSDLDSIIGFSLQDMGQHHI DGIEKVRLCGPPPCNVIFIWENWRTFHVIPGEKMGSKCCMKLTPFLASPYRSKLPSSFLSSLYALVSLLLSNANLLDIPQ EICHFPSLKTLDLSGNDFSKLPKSMKQLCKLESLILCRCKKLKSLPELPQCLETLNAHGCVSLKNVHRSFEQFPRHCTFS NCFNISSDSVKNILDNSIAHMARHPCQVPLSLSLCTFSYIYIYIISFAFLKQNLIKAQVSSFSVPAFTGLNSIFHLQRSS SVKIRINHIIKLLGFKITVVVAFWDDSRNAASFGIRCVCRWKNKKGLSRRLERVFYCWTPEEVAQSVLENHMFVFCDVSM HLGIADGNDHDILDDLIVFEFVPVNGKNRVLDDCCTITECGVDVITEKTDKASHDLRRPGSALDSMELSSYVLPQFKKRK RSFSGSKDIEMEHDRLILSETNRRVASDMAPLSSSSLSPRPRYDVFLSFYEDVRRTFVSYLIKEFKWLGITAVYSGLVGC EVTSHPEVTEAIKKSRISVVILSKNYVSSSRCLNELVEIITWSKETWGYRVIPVYYEVDPSYVRKQTKTIGKGLVGTFLG KVEKPEVKWRRALTYIVDEAGESSQDWNDDTKMIEKIATNVSKQVDVMESNGFDTVFIKETEDIEEFETNIWDKLDGVHI IPSWYMYAFSLIYLCLLASQSDYITPSVYI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | RRS1; disease resistance protein RRS1; K16225 probable WRKY transcription factor 52 (A) |