Names & Information

Knowledge of BnaC03G0501200ZS:

Gene Name
BnaC03G0501200ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
hypothetical protein AALP_AA3G328900 [Arabis alpina]
Best Hit (SwissProt)
Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1
NT seq
Len:3720 nt

ATGAAAAAAAGTCCCTCTTTGAGAAGTTACTCTATGGACGCCTCACCGCAACCTCAAGTGTTCATCAACTTCCGAGGAGC
TGAACTTCGTCACAGCTTTATCGGCTATCTCAAGAAGGCCTTTGAAAGAAATGGAATCAACTTTTTCATCGACACCAACG
AACAGAAAGGCCTTAATCAGAAAGTTTTCTTCAAGAGGATAGAAGAGTCAAAGATCGCGCTGGCGATCTTCTCCCCTAGG
TATACGGAGTCAAGATGGTGTCTGGACGAGTTGGTGAAGATGAAGGAATGCATGGAAGCGAACAAACTTGTGATTGTTCC
CATCTTCTATAAGGTAACTCCATACACCATTCAAGGGCTCATGGGAGATTTTGGTGATAAGTTGAGGGAGCTGGTGAAGT
ATGTCGATGATGTGAGAGAAAAAAAATGGACTGAAGCTTTGAAGTATGCTTCCACAATTATAGGCATCAATTACGATGGG
AAGAGAGACGAAGACCTTCTCATTGGTGAAATAGTTGGGGATATTCAAAGAGTACTAAAGAAAATTGCATTACAAAAAGG
AAAAGAAGAACCCAAGACAAAAATGCCTCGCACTAATACCTCCACATATTCAAGCTCTATCACTCACAGTAAGAACATAG
TTGATTCTGATAACCAAAACGAGCTCGCTGGACTCAAACAACGCCTTGATGAACTGAAAGAAAAGTTAGACCTTAGCCAC
AAGGAAACTCGCATTGTTGGGGTTTACGGGATGCCCGGAATCGGCAAAACCACCCTGGTGAAGAGATTGTATGATGAGTG
GAAACACAAGTTCCAGCGACACGTGCATTTGGTGAACATCCGTGACATGTCAAATGCGTATGGGGCGCAATCACTACAGA
GGATAGTTTTGAAAAGTTTGCTTAGTGACACTTACAATGAGATAAGTGACGATATGAACTATGAAACCATGGAGAGTGAA
CTGCTACAGAAGAAAGTTTTTCTTGTTTTCGATGACGTGAGTAGCAAGAATCAGGTACACTCTCTTCTGGATAATCATAA
ATGGATTAGGAAAGGAAGCAGAGTGGTTATATCCACGCGTAACAGGACAGCGATAAGCCAACTCGAGTATACTTACGCAG
TCCCAAGGTTGGATCTCGCAGACAGCTTGAACCGATTCAGCTTTTATGCCTTTAAAGATCACAACTGTCCTCGCCCGGGA
AATCTCAGGGATCTTTCCACAAAGTTCGCTGATTATGCCCGAGGTAACCCGCAAGCTCTCAAGATATTAGGTCGGGAGCT
TCTCTCGGGAGATGAGGATCACTGGTCACAGAGATTGGATACACTGGCGCAAATTCCCAGCCCGCGTATTCAAGATCTAT
TGAGAAAAAGTTATGATGAGCTAAGTGAGCAGCAAAGAGAAGCTTTTTTTGTTGTAGCCTGTTTCTTCAGATCAGGGGAT
GAGTATTACGTTAGAAGTTTAGTGGATTCAGCAGATCCTGATAATTCTACTGATGATACTGCTAGTGAAATAAGAGACCT
CGCGGACAAGCTACTGATTAGCATCTCCAGTGGGCGAGTTGAAATGCATGATTTGTGGTCTACGTTCGCTAAGAAACTTG
GTTCATCCTTCTCCGCTGAAAGTAGTCAGGGAAACTATATGATTTGGGATCATGATACATTTGCTTCTATGGCGAAAAAC
AAAAGAATGAGATTTGTCCACCAAACAAGGAAAAATGATCAATCTAACCTCAAAAACTCGGGCAGTGACAGCGTCAAGGG
TATTTCGCTGGACATGTCTGAATTCAGTGATAAACTGACCTTAGACAATGAAATTTTCAGTAAGATGTGCAACCTACGGT
ACCTTAAAGTGTACAACTCCCAGTGTTCTCGAGACTGTGATGGTGATTACAAATTGAATTTCCCTGATGGACTTAAATGC
GCAATGGAAAGTCTTCGGTATCTGTACTGGCTACAGTTCCCATTGGAGGAACTTCCAGAAGGGATAAGCCCGAAGAACCT
TACTGAGCTCAGTCTCCCTTACAGAAAGATAAAACGACTTTGGGAAGACAGTAAGGATACATCCAAACTCAAATGGGTCG
ATCTCAGTCACTCGAGTGAGCTGTGTGAAATATCTGGGTTACTAGGGGCTTCAAATCTCCAAAGACTGAATCTTGAAGGC
TGCACAGACTTGACAACATTGCCGCAAGGGATGCAAGAAATGGAGAGCCTAGTTTACCTGAACATGGGAGGATGCACACG
ACTGGTGTCTCTTCCTAACATGAAGTTGAAATCTTTGAAAACTCTCATCTTGAGTTACTGCTCGAGCCTTGAACAATTTC
CTGTGATTTCCGAGAGTCTACATTCTCTTTACTTGCAAGCCACGGCAATTGAAGTTATTCCAGATTCAGTTGAGGACCTT
CAGAAACTTTTCCTATTAAATTTGAAAGACTGCAAATCGCTGAAGAGTCTTCCCGATTGTCTTGGAAAGCTAAGAGCACT
TCAAGAGCTAATACTCTCTGGCTGCTCAAAGCTAAAGATGTTTCCAGAGTTGAAGGAGAAGATGGAATCTCTGAAGATTT
TACTGCTTGATGGAACAGGGATAAAGCAGATGCCAATGTTATTGCATTGCAGTCAGTCACAAGGAAAAGCTTTTGCAAAT
AAGCCATTTCCAGACATTCAGACACATTGCGGTTTAAGTAATTCCGGTCTATCATCCTCTTTGCTATCGTTATGCTTAAG
TGGAAATGATCTTGAGAGCTTGCAGGATAACATCAGTCAGCTTTATCAACTTAAATGGCTTGACTTAAAGAACTGCAAGA
AGCTCAAATCTATTCCAGTGCTTCCACCAAACCTCAAGTGCTTAGATGCACATGGATGCGACTCACTGGAAAAAGTTGGA
AGCCCTCTAGCCCTTCTCATGGTGACAGGCCAAATCCATTGCACATTCATTTTCACTAATTGCATCAAATTGGATCAAGT
TGCGATAAGTAATATCATATCTTACACTCGTAAGAAAAGCCAGTTAATATCAGATGCTTTGAATCGTTATAATGGGGGCT
TTGTTTTGGAATCTTTGATTGGAACTTGTTTTCCTGGATGTGAAGTACCTGCATCGTTTGATCACCAAGGCTTTGGGTCA
GTGTTAGAGCCGAAACTACCTCGGCACTGGTGTGACAGTAGGCTTACTGGGATAGCTTTATGCGCTGTTATAATGTTTCC
GGACTGCCACCATCAAAACAACCGTTTCTTGGTGAAATGCACTTGTGAATTCAAAACTGATGATGGGCCATGTATCAGTT
TTACTTCCATTGTTGGAGGTTGGAGCATACCAGGTGATGATCCACGAAAGATTGACTCTGCTCATGTTTTTATTGGCTAT
ACAAGCTGGCTATATATCAACAAATGTCACGTGGAAGACCATGGGAAAGGATGTATTCCTTATTTGGCTTCTCTCAGATT
TCAGGTGACTGATAGTTCAGGTGTGGTAGCAAAATGCAAAGTGCTAAAATGTGGCTTTAGTTTGGTATGTACACCAAATG
ATATCGATGATATCTCTCGGGAGAAGATGGGTGATATCTCTCCACAGAATATGGGGAATGCGCTAAACAAAGAAAATTCA
AATAAAACTTCAAGAAATGATTATGATTTCTGGTATCCATCAAACTGTGGTATGACTTCGAGAAATGATGAACATTTTCA
CGATGAAGAACTTGCAGAAGCAAACATCTCCAAAACTTGA
AA seq
Len:1240 aa

MKKSPSLRSYSMDASPQPQVFINFRGAELRHSFIGYLKKAFERNGINFFIDTNEQKGLNQKVFFKRIEESKIALAIFSPR
YTESRWCLDELVKMKECMEANKLVIVPIFYKVTPYTIQGLMGDFGDKLRELVKYVDDVREKKWTEALKYASTIIGINYDG
KRDEDLLIGEIVGDIQRVLKKIALQKGKEEPKTKMPRTNTSTYSSSITHSKNIVDSDNQNELAGLKQRLDELKEKLDLSH
KETRIVGVYGMPGIGKTTLVKRLYDEWKHKFQRHVHLVNIRDMSNAYGAQSLQRIVLKSLLSDTYNEISDDMNYETMESE
LLQKKVFLVFDDVSSKNQVHSLLDNHKWIRKGSRVVISTRNRTAISQLEYTYAVPRLDLADSLNRFSFYAFKDHNCPRPG
NLRDLSTKFADYARGNPQALKILGRELLSGDEDHWSQRLDTLAQIPSPRIQDLLRKSYDELSEQQREAFFVVACFFRSGD
EYYVRSLVDSADPDNSTDDTASEIRDLADKLLISISSGRVEMHDLWSTFAKKLGSSFSAESSQGNYMIWDHDTFASMAKN
KRMRFVHQTRKNDQSNLKNSGSDSVKGISLDMSEFSDKLTLDNEIFSKMCNLRYLKVYNSQCSRDCDGDYKLNFPDGLKC
AMESLRYLYWLQFPLEELPEGISPKNLTELSLPYRKIKRLWEDSKDTSKLKWVDLSHSSELCEISGLLGASNLQRLNLEG
CTDLTTLPQGMQEMESLVYLNMGGCTRLVSLPNMKLKSLKTLILSYCSSLEQFPVISESLHSLYLQATAIEVIPDSVEDL
QKLFLLNLKDCKSLKSLPDCLGKLRALQELILSGCSKLKMFPELKEKMESLKILLLDGTGIKQMPMLLHCSQSQGKAFAN
KPFPDIQTHCGLSNSGLSSSLLSLCLSGNDLESLQDNISQLYQLKWLDLKNCKKLKSIPVLPPNLKCLDAHGCDSLEKVG
SPLALLMVTGQIHCTFIFTNCIKLDQVAISNIISYTRKKSQLISDALNRYNGGFVLESLIGTCFPGCEVPASFDHQGFGS
VLEPKLPRHWCDSRLTGIALCAVIMFPDCHHQNNRFLVKCTCEFKTDDGPCISFTSIVGGWSIPGDDPRKIDSAHVFIGY
TSWLYINKCHVEDHGKGCIPYLASLRFQVTDSSGVVAKCKVLKCGFSLVCTPNDIDDISREKMGDISPQNMGNALNKENS
NKTSRNDYDFWYPSNCGMTSRNDEHFHDEELAEANISKT*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
Leucine Rich Repeat
KEGG
hypothetical protein; K16226 disease resistance protein RPS4 (A)