Gene Name | BnaC03G0501200ZS |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | hypothetical protein AALP_AA3G328900 [Arabis alpina] |
Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
NT seq | Len:3720 nt
ATGAAAAAAAGTCCCTCTTTGAGAAGTTACTCTATGGACGCCTCACCGCAACCTCAAGTGTTCATCAACTTCCGAGGAGC
TGAACTTCGTCACAGCTTTATCGGCTATCTCAAGAAGGCCTTTGAAAGAAATGGAATCAACTTTTTCATCGACACCAACG
AACAGAAAGGCCTTAATCAGAAAGTTTTCTTCAAGAGGATAGAAGAGTCAAAGATCGCGCTGGCGATCTTCTCCCCTAGG
TATACGGAGTCAAGATGGTGTCTGGACGAGTTGGTGAAGATGAAGGAATGCATGGAAGCGAACAAACTTGTGATTGTTCC
CATCTTCTATAAGGTAACTCCATACACCATTCAAGGGCTCATGGGAGATTTTGGTGATAAGTTGAGGGAGCTGGTGAAGT
ATGTCGATGATGTGAGAGAAAAAAAATGGACTGAAGCTTTGAAGTATGCTTCCACAATTATAGGCATCAATTACGATGGG
AAGAGAGACGAAGACCTTCTCATTGGTGAAATAGTTGGGGATATTCAAAGAGTACTAAAGAAAATTGCATTACAAAAAGG
AAAAGAAGAACCCAAGACAAAAATGCCTCGCACTAATACCTCCACATATTCAAGCTCTATCACTCACAGTAAGAACATAG
TTGATTCTGATAACCAAAACGAGCTCGCTGGACTCAAACAACGCCTTGATGAACTGAAAGAAAAGTTAGACCTTAGCCAC
AAGGAAACTCGCATTGTTGGGGTTTACGGGATGCCCGGAATCGGCAAAACCACCCTGGTGAAGAGATTGTATGATGAGTG
GAAACACAAGTTCCAGCGACACGTGCATTTGGTGAACATCCGTGACATGTCAAATGCGTATGGGGCGCAATCACTACAGA
GGATAGTTTTGAAAAGTTTGCTTAGTGACACTTACAATGAGATAAGTGACGATATGAACTATGAAACCATGGAGAGTGAA
CTGCTACAGAAGAAAGTTTTTCTTGTTTTCGATGACGTGAGTAGCAAGAATCAGGTACACTCTCTTCTGGATAATCATAA
ATGGATTAGGAAAGGAAGCAGAGTGGTTATATCCACGCGTAACAGGACAGCGATAAGCCAACTCGAGTATACTTACGCAG
TCCCAAGGTTGGATCTCGCAGACAGCTTGAACCGATTCAGCTTTTATGCCTTTAAAGATCACAACTGTCCTCGCCCGGGA
AATCTCAGGGATCTTTCCACAAAGTTCGCTGATTATGCCCGAGGTAACCCGCAAGCTCTCAAGATATTAGGTCGGGAGCT
TCTCTCGGGAGATGAGGATCACTGGTCACAGAGATTGGATACACTGGCGCAAATTCCCAGCCCGCGTATTCAAGATCTAT
TGAGAAAAAGTTATGATGAGCTAAGTGAGCAGCAAAGAGAAGCTTTTTTTGTTGTAGCCTGTTTCTTCAGATCAGGGGAT
GAGTATTACGTTAGAAGTTTAGTGGATTCAGCAGATCCTGATAATTCTACTGATGATACTGCTAGTGAAATAAGAGACCT
CGCGGACAAGCTACTGATTAGCATCTCCAGTGGGCGAGTTGAAATGCATGATTTGTGGTCTACGTTCGCTAAGAAACTTG
GTTCATCCTTCTCCGCTGAAAGTAGTCAGGGAAACTATATGATTTGGGATCATGATACATTTGCTTCTATGGCGAAAAAC
AAAAGAATGAGATTTGTCCACCAAACAAGGAAAAATGATCAATCTAACCTCAAAAACTCGGGCAGTGACAGCGTCAAGGG
TATTTCGCTGGACATGTCTGAATTCAGTGATAAACTGACCTTAGACAATGAAATTTTCAGTAAGATGTGCAACCTACGGT
ACCTTAAAGTGTACAACTCCCAGTGTTCTCGAGACTGTGATGGTGATTACAAATTGAATTTCCCTGATGGACTTAAATGC
GCAATGGAAAGTCTTCGGTATCTGTACTGGCTACAGTTCCCATTGGAGGAACTTCCAGAAGGGATAAGCCCGAAGAACCT
TACTGAGCTCAGTCTCCCTTACAGAAAGATAAAACGACTTTGGGAAGACAGTAAGGATACATCCAAACTCAAATGGGTCG
ATCTCAGTCACTCGAGTGAGCTGTGTGAAATATCTGGGTTACTAGGGGCTTCAAATCTCCAAAGACTGAATCTTGAAGGC
TGCACAGACTTGACAACATTGCCGCAAGGGATGCAAGAAATGGAGAGCCTAGTTTACCTGAACATGGGAGGATGCACACG
ACTGGTGTCTCTTCCTAACATGAAGTTGAAATCTTTGAAAACTCTCATCTTGAGTTACTGCTCGAGCCTTGAACAATTTC
CTGTGATTTCCGAGAGTCTACATTCTCTTTACTTGCAAGCCACGGCAATTGAAGTTATTCCAGATTCAGTTGAGGACCTT
CAGAAACTTTTCCTATTAAATTTGAAAGACTGCAAATCGCTGAAGAGTCTTCCCGATTGTCTTGGAAAGCTAAGAGCACT
TCAAGAGCTAATACTCTCTGGCTGCTCAAAGCTAAAGATGTTTCCAGAGTTGAAGGAGAAGATGGAATCTCTGAAGATTT
TACTGCTTGATGGAACAGGGATAAAGCAGATGCCAATGTTATTGCATTGCAGTCAGTCACAAGGAAAAGCTTTTGCAAAT
AAGCCATTTCCAGACATTCAGACACATTGCGGTTTAAGTAATTCCGGTCTATCATCCTCTTTGCTATCGTTATGCTTAAG
TGGAAATGATCTTGAGAGCTTGCAGGATAACATCAGTCAGCTTTATCAACTTAAATGGCTTGACTTAAAGAACTGCAAGA
AGCTCAAATCTATTCCAGTGCTTCCACCAAACCTCAAGTGCTTAGATGCACATGGATGCGACTCACTGGAAAAAGTTGGA
AGCCCTCTAGCCCTTCTCATGGTGACAGGCCAAATCCATTGCACATTCATTTTCACTAATTGCATCAAATTGGATCAAGT
TGCGATAAGTAATATCATATCTTACACTCGTAAGAAAAGCCAGTTAATATCAGATGCTTTGAATCGTTATAATGGGGGCT
TTGTTTTGGAATCTTTGATTGGAACTTGTTTTCCTGGATGTGAAGTACCTGCATCGTTTGATCACCAAGGCTTTGGGTCA
GTGTTAGAGCCGAAACTACCTCGGCACTGGTGTGACAGTAGGCTTACTGGGATAGCTTTATGCGCTGTTATAATGTTTCC
GGACTGCCACCATCAAAACAACCGTTTCTTGGTGAAATGCACTTGTGAATTCAAAACTGATGATGGGCCATGTATCAGTT
TTACTTCCATTGTTGGAGGTTGGAGCATACCAGGTGATGATCCACGAAAGATTGACTCTGCTCATGTTTTTATTGGCTAT
ACAAGCTGGCTATATATCAACAAATGTCACGTGGAAGACCATGGGAAAGGATGTATTCCTTATTTGGCTTCTCTCAGATT
TCAGGTGACTGATAGTTCAGGTGTGGTAGCAAAATGCAAAGTGCTAAAATGTGGCTTTAGTTTGGTATGTACACCAAATG
ATATCGATGATATCTCTCGGGAGAAGATGGGTGATATCTCTCCACAGAATATGGGGAATGCGCTAAACAAAGAAAATTCA
AATAAAACTTCAAGAAATGATTATGATTTCTGGTATCCATCAAACTGTGGTATGACTTCGAGAAATGATGAACATTTTCA
CGATGAAGAACTTGCAGAAGCAAACATCTCCAAAACTTGA |
AA seq | Len:1240 aa
MKKSPSLRSYSMDASPQPQVFINFRGAELRHSFIGYLKKAFERNGINFFIDTNEQKGLNQKVFFKRIEESKIALAIFSPR
YTESRWCLDELVKMKECMEANKLVIVPIFYKVTPYTIQGLMGDFGDKLRELVKYVDDVREKKWTEALKYASTIIGINYDG
KRDEDLLIGEIVGDIQRVLKKIALQKGKEEPKTKMPRTNTSTYSSSITHSKNIVDSDNQNELAGLKQRLDELKEKLDLSH
KETRIVGVYGMPGIGKTTLVKRLYDEWKHKFQRHVHLVNIRDMSNAYGAQSLQRIVLKSLLSDTYNEISDDMNYETMESE
LLQKKVFLVFDDVSSKNQVHSLLDNHKWIRKGSRVVISTRNRTAISQLEYTYAVPRLDLADSLNRFSFYAFKDHNCPRPG
NLRDLSTKFADYARGNPQALKILGRELLSGDEDHWSQRLDTLAQIPSPRIQDLLRKSYDELSEQQREAFFVVACFFRSGD
EYYVRSLVDSADPDNSTDDTASEIRDLADKLLISISSGRVEMHDLWSTFAKKLGSSFSAESSQGNYMIWDHDTFASMAKN
KRMRFVHQTRKNDQSNLKNSGSDSVKGISLDMSEFSDKLTLDNEIFSKMCNLRYLKVYNSQCSRDCDGDYKLNFPDGLKC
AMESLRYLYWLQFPLEELPEGISPKNLTELSLPYRKIKRLWEDSKDTSKLKWVDLSHSSELCEISGLLGASNLQRLNLEG
CTDLTTLPQGMQEMESLVYLNMGGCTRLVSLPNMKLKSLKTLILSYCSSLEQFPVISESLHSLYLQATAIEVIPDSVEDL
QKLFLLNLKDCKSLKSLPDCLGKLRALQELILSGCSKLKMFPELKEKMESLKILLLDGTGIKQMPMLLHCSQSQGKAFAN
KPFPDIQTHCGLSNSGLSSSLLSLCLSGNDLESLQDNISQLYQLKWLDLKNCKKLKSIPVLPPNLKCLDAHGCDSLEKVG
SPLALLMVTGQIHCTFIFTNCIKLDQVAISNIISYTRKKSQLISDALNRYNGGFVLESLIGTCFPGCEVPASFDHQGFGS
VLEPKLPRHWCDSRLTGIALCAVIMFPDCHHQNNRFLVKCTCEFKTDDGPCISFTSIVGGWSIPGDDPRKIDSAHVFIGY
TSWLYINKCHVEDHGKGCIPYLASLRFQVTDSSGVVAKCKVLKCGFSLVCTPNDIDDISREKMGDISPQNMGNALNKENS
NKTSRNDYDFWYPSNCGMTSRNDEHFHDEELAEANISKT* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | Leucine Rich Repeat |
KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |
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