Names & Information
Knowledge of BnaC03G0501200ZS:
| Gene Name | BnaC03G0501200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein AALP_AA3G328900 [Arabis alpina] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3720 nt ATGAAAAAAAGTCCCTCTTTGAGAAGTTACTCTATGGACGCCTCACCGCAACCTCAAGTGTTCATCAACTTCCGAGGAGC TGAACTTCGTCACAGCTTTATCGGCTATCTCAAGAAGGCCTTTGAAAGAAATGGAATCAACTTTTTCATCGACACCAACG AACAGAAAGGCCTTAATCAGAAAGTTTTCTTCAAGAGGATAGAAGAGTCAAAGATCGCGCTGGCGATCTTCTCCCCTAGG TATACGGAGTCAAGATGGTGTCTGGACGAGTTGGTGAAGATGAAGGAATGCATGGAAGCGAACAAACTTGTGATTGTTCC CATCTTCTATAAGGTAACTCCATACACCATTCAAGGGCTCATGGGAGATTTTGGTGATAAGTTGAGGGAGCTGGTGAAGT ATGTCGATGATGTGAGAGAAAAAAAATGGACTGAAGCTTTGAAGTATGCTTCCACAATTATAGGCATCAATTACGATGGG AAGAGAGACGAAGACCTTCTCATTGGTGAAATAGTTGGGGATATTCAAAGAGTACTAAAGAAAATTGCATTACAAAAAGG AAAAGAAGAACCCAAGACAAAAATGCCTCGCACTAATACCTCCACATATTCAAGCTCTATCACTCACAGTAAGAACATAG TTGATTCTGATAACCAAAACGAGCTCGCTGGACTCAAACAACGCCTTGATGAACTGAAAGAAAAGTTAGACCTTAGCCAC AAGGAAACTCGCATTGTTGGGGTTTACGGGATGCCCGGAATCGGCAAAACCACCCTGGTGAAGAGATTGTATGATGAGTG GAAACACAAGTTCCAGCGACACGTGCATTTGGTGAACATCCGTGACATGTCAAATGCGTATGGGGCGCAATCACTACAGA GGATAGTTTTGAAAAGTTTGCTTAGTGACACTTACAATGAGATAAGTGACGATATGAACTATGAAACCATGGAGAGTGAA CTGCTACAGAAGAAAGTTTTTCTTGTTTTCGATGACGTGAGTAGCAAGAATCAGGTACACTCTCTTCTGGATAATCATAA ATGGATTAGGAAAGGAAGCAGAGTGGTTATATCCACGCGTAACAGGACAGCGATAAGCCAACTCGAGTATACTTACGCAG TCCCAAGGTTGGATCTCGCAGACAGCTTGAACCGATTCAGCTTTTATGCCTTTAAAGATCACAACTGTCCTCGCCCGGGA AATCTCAGGGATCTTTCCACAAAGTTCGCTGATTATGCCCGAGGTAACCCGCAAGCTCTCAAGATATTAGGTCGGGAGCT TCTCTCGGGAGATGAGGATCACTGGTCACAGAGATTGGATACACTGGCGCAAATTCCCAGCCCGCGTATTCAAGATCTAT TGAGAAAAAGTTATGATGAGCTAAGTGAGCAGCAAAGAGAAGCTTTTTTTGTTGTAGCCTGTTTCTTCAGATCAGGGGAT GAGTATTACGTTAGAAGTTTAGTGGATTCAGCAGATCCTGATAATTCTACTGATGATACTGCTAGTGAAATAAGAGACCT CGCGGACAAGCTACTGATTAGCATCTCCAGTGGGCGAGTTGAAATGCATGATTTGTGGTCTACGTTCGCTAAGAAACTTG GTTCATCCTTCTCCGCTGAAAGTAGTCAGGGAAACTATATGATTTGGGATCATGATACATTTGCTTCTATGGCGAAAAAC AAAAGAATGAGATTTGTCCACCAAACAAGGAAAAATGATCAATCTAACCTCAAAAACTCGGGCAGTGACAGCGTCAAGGG TATTTCGCTGGACATGTCTGAATTCAGTGATAAACTGACCTTAGACAATGAAATTTTCAGTAAGATGTGCAACCTACGGT ACCTTAAAGTGTACAACTCCCAGTGTTCTCGAGACTGTGATGGTGATTACAAATTGAATTTCCCTGATGGACTTAAATGC GCAATGGAAAGTCTTCGGTATCTGTACTGGCTACAGTTCCCATTGGAGGAACTTCCAGAAGGGATAAGCCCGAAGAACCT TACTGAGCTCAGTCTCCCTTACAGAAAGATAAAACGACTTTGGGAAGACAGTAAGGATACATCCAAACTCAAATGGGTCG ATCTCAGTCACTCGAGTGAGCTGTGTGAAATATCTGGGTTACTAGGGGCTTCAAATCTCCAAAGACTGAATCTTGAAGGC TGCACAGACTTGACAACATTGCCGCAAGGGATGCAAGAAATGGAGAGCCTAGTTTACCTGAACATGGGAGGATGCACACG ACTGGTGTCTCTTCCTAACATGAAGTTGAAATCTTTGAAAACTCTCATCTTGAGTTACTGCTCGAGCCTTGAACAATTTC CTGTGATTTCCGAGAGTCTACATTCTCTTTACTTGCAAGCCACGGCAATTGAAGTTATTCCAGATTCAGTTGAGGACCTT CAGAAACTTTTCCTATTAAATTTGAAAGACTGCAAATCGCTGAAGAGTCTTCCCGATTGTCTTGGAAAGCTAAGAGCACT TCAAGAGCTAATACTCTCTGGCTGCTCAAAGCTAAAGATGTTTCCAGAGTTGAAGGAGAAGATGGAATCTCTGAAGATTT TACTGCTTGATGGAACAGGGATAAAGCAGATGCCAATGTTATTGCATTGCAGTCAGTCACAAGGAAAAGCTTTTGCAAAT AAGCCATTTCCAGACATTCAGACACATTGCGGTTTAAGTAATTCCGGTCTATCATCCTCTTTGCTATCGTTATGCTTAAG TGGAAATGATCTTGAGAGCTTGCAGGATAACATCAGTCAGCTTTATCAACTTAAATGGCTTGACTTAAAGAACTGCAAGA AGCTCAAATCTATTCCAGTGCTTCCACCAAACCTCAAGTGCTTAGATGCACATGGATGCGACTCACTGGAAAAAGTTGGA AGCCCTCTAGCCCTTCTCATGGTGACAGGCCAAATCCATTGCACATTCATTTTCACTAATTGCATCAAATTGGATCAAGT TGCGATAAGTAATATCATATCTTACACTCGTAAGAAAAGCCAGTTAATATCAGATGCTTTGAATCGTTATAATGGGGGCT TTGTTTTGGAATCTTTGATTGGAACTTGTTTTCCTGGATGTGAAGTACCTGCATCGTTTGATCACCAAGGCTTTGGGTCA GTGTTAGAGCCGAAACTACCTCGGCACTGGTGTGACAGTAGGCTTACTGGGATAGCTTTATGCGCTGTTATAATGTTTCC GGACTGCCACCATCAAAACAACCGTTTCTTGGTGAAATGCACTTGTGAATTCAAAACTGATGATGGGCCATGTATCAGTT TTACTTCCATTGTTGGAGGTTGGAGCATACCAGGTGATGATCCACGAAAGATTGACTCTGCTCATGTTTTTATTGGCTAT ACAAGCTGGCTATATATCAACAAATGTCACGTGGAAGACCATGGGAAAGGATGTATTCCTTATTTGGCTTCTCTCAGATT TCAGGTGACTGATAGTTCAGGTGTGGTAGCAAAATGCAAAGTGCTAAAATGTGGCTTTAGTTTGGTATGTACACCAAATG ATATCGATGATATCTCTCGGGAGAAGATGGGTGATATCTCTCCACAGAATATGGGGAATGCGCTAAACAAAGAAAATTCA AATAAAACTTCAAGAAATGATTATGATTTCTGGTATCCATCAAACTGTGGTATGACTTCGAGAAATGATGAACATTTTCA CGATGAAGAACTTGCAGAAGCAAACATCTCCAAAACTTGA |
| AA seq | Len:1240 aa MKKSPSLRSYSMDASPQPQVFINFRGAELRHSFIGYLKKAFERNGINFFIDTNEQKGLNQKVFFKRIEESKIALAIFSPR YTESRWCLDELVKMKECMEANKLVIVPIFYKVTPYTIQGLMGDFGDKLRELVKYVDDVREKKWTEALKYASTIIGINYDG KRDEDLLIGEIVGDIQRVLKKIALQKGKEEPKTKMPRTNTSTYSSSITHSKNIVDSDNQNELAGLKQRLDELKEKLDLSH KETRIVGVYGMPGIGKTTLVKRLYDEWKHKFQRHVHLVNIRDMSNAYGAQSLQRIVLKSLLSDTYNEISDDMNYETMESE LLQKKVFLVFDDVSSKNQVHSLLDNHKWIRKGSRVVISTRNRTAISQLEYTYAVPRLDLADSLNRFSFYAFKDHNCPRPG NLRDLSTKFADYARGNPQALKILGRELLSGDEDHWSQRLDTLAQIPSPRIQDLLRKSYDELSEQQREAFFVVACFFRSGD EYYVRSLVDSADPDNSTDDTASEIRDLADKLLISISSGRVEMHDLWSTFAKKLGSSFSAESSQGNYMIWDHDTFASMAKN KRMRFVHQTRKNDQSNLKNSGSDSVKGISLDMSEFSDKLTLDNEIFSKMCNLRYLKVYNSQCSRDCDGDYKLNFPDGLKC AMESLRYLYWLQFPLEELPEGISPKNLTELSLPYRKIKRLWEDSKDTSKLKWVDLSHSSELCEISGLLGASNLQRLNLEG CTDLTTLPQGMQEMESLVYLNMGGCTRLVSLPNMKLKSLKTLILSYCSSLEQFPVISESLHSLYLQATAIEVIPDSVEDL QKLFLLNLKDCKSLKSLPDCLGKLRALQELILSGCSKLKMFPELKEKMESLKILLLDGTGIKQMPMLLHCSQSQGKAFAN KPFPDIQTHCGLSNSGLSSSLLSLCLSGNDLESLQDNISQLYQLKWLDLKNCKKLKSIPVLPPNLKCLDAHGCDSLEKVG SPLALLMVTGQIHCTFIFTNCIKLDQVAISNIISYTRKKSQLISDALNRYNGGFVLESLIGTCFPGCEVPASFDHQGFGS VLEPKLPRHWCDSRLTGIALCAVIMFPDCHHQNNRFLVKCTCEFKTDDGPCISFTSIVGGWSIPGDDPRKIDSAHVFIGY TSWLYINKCHVEDHGKGCIPYLASLRFQVTDSSGVVAKCKVLKCGFSLVCTPNDIDDISREKMGDISPQNMGNALNKENS NKTSRNDYDFWYPSNCGMTSRNDEHFHDEELAEANISKT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |