Names & Information
Knowledge of BnaC03G0501300ZS:
| Gene Name | BnaC03G0501300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g47400D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RRS1 OS=Arabidopsis thaliana GN=RRS1 PE=2 SV=1 |
| NT seq | Len:4785 nt ATGGCCAGTGACACAAATTCATTGAGATACAAGGTCTACTTCAGCTTCCACAAAGGTGAAGACACAATTCGTTACTCCTT CGTCAGCCACCTTTCCGCATCTCTTCGCCGGAAAGGCCTGATTCCTTCGGCTTCATTGTTTGTGGATAACTGTTCCAATG GGACTCGGACAGAGAAACATAATTTCAAGGCCTTTGTGGTGGTCCTCTCTGAGAAGTACGTGTTATCTTCTGAATGCCTC GATGAGCTTGCGGAAATTGTTGATCGCCAGCGGAATAACCAAAACGTTGTAGTCCCGGTGTTTTATAGCATAACTCAATC GGAAGTTATGCATAAATCGCGATTGGGCATATTGAGAGATACATTTCCGCTAGAGAGTAACTCAGCCGAGCGGGTAACTA GATGGATAGGCGCTCTGAAGAAAACGGTCGAGTCGTATAAGCCAAGGATGGATTATGGTGATTGTGAACTTGTTGAAGAA ATTGCTAGGGATGTGTACGAAAAGATGTTTCCTACCAAACGAATTGGAATCTATTCAAGGTTGCTTGAGTTGGAAAACTT TCTTTGCAAGCAACCATGGGGTGTCCGCAGCATTGGAATTTGGGGCATGCCAGGCATAGGCAAAACTACACTTGCTAAAG CAGCATTTGACCAATTTTCTGGTGATTATGAAGTTTCTTGTTTCATCAAAGATTTCGACAAAGAATTTCATATGAAAGGA ATTTATTATTTGCTGCAAGAATACTTAGGGGGAACTGTCAGGGAAGAGCTTGGTATAAACAATTATGTTATGGAGCCAGA ACCAAAAAGAGTTCTTATTGTCCTAGATAATGTCTGCAAACCTCTGGATGCAGATGCTTTTCTGAATGGGTTTGATTGGT TTGGTCCAGGGAGTTTGATAATCATAACTTCTAGAGACAAACAAGTATTCGTGCAATGTGGCGTCAATCAAATATATGAG GTTCAAGGTTTCAATGTAGACGAGGCAAAGAAACTATTCTCATCTGGAATAGATTGGAGCAAAAGGAGTGGTTTGGATAC TCTTGAACCTTATTTGAGGTCAGTGATACAATATTCTAGTGGAAATCCTTTAGCTCTCAGCTTTTATGGAAAAGAGCTGC TACCCAAGAATATAGAAGAAATAGAGACAGAGCTCCTCAGTCTGAAGCAAATTCCCCCGCCTTTGATTATGGAAGCAATC AAAATCAGCTACTATACACTTAATGACAGCGAGAGGACTATGTTTCTAGACATTGCTTGTTTCTTCAGGGGAGAAAATGT GGATTACGTGATGCAACTGTTTGAAGGGTGTGGTTTCTTTCCACATGTTGGAATATCTGTCCTAGTTGATAAATGCCTGG TGACTATTTTAGAAAGCAAGATGCAAATGCATGATCTCATTCAGGTCGTTGCAAAGGAGATTTCCAATGAAGAGACTGTA CAGCTAGAAAGACATTGCAGATTATGGGACGCTTCAATTATTCAATCTCTGCTAGAAGATAAAGAACCCAAATCAATTGG GGAGTCTACGGGTATTGAAGATATTGAAGCCATATTTCTAGATATATCCAACTTGAAATTTTATGTCAATCCTAATGCTT TCAAGAGTATGCATAATCTTCGATTTTTAAAGATATACAGCTCCAATCATGGAAAGCATCAAGGACTTGGCATATACAAA TCTCTTGAGTCTCTTCCAAATGAGCTAAGGCTACTCCATTGGGAGAATTACCCTCTAAACTACTTGCCCCATGATTTTGA TCCTAGCCACCTTGTTGAACTTAACATGCCTTACAGTAAACTTGAAAAGCTTTGGGATGGAATAAAGAATCTGGAGATGC TAAAGACGATCAAGCTATGTCATTCCCAAGAACTTGTTGAAATTAACGATATTTCAAATGCTCAAAATGTTGAGGTAATT GATCTCCAAGGCTGTAAAAAATTTCCGAGTTTTCCAGCCACGGGTCATCTACAACATCTCCGAGTTATTAATCTTTCTGG TTGCGTGGAGATCAAAAGCTTTACAGAGGTTCCACCAAATATCGAGGCATTGTATCTCAGTGGAACTAGTATAAGAGAGA TACTAACATTAACTACGGGGCTCACCTCGCAATGTAGGAACTGCATAGATTGTCTTCATGTCCAAACTTTAGATTTTCTT AGAGTTCTTGATCTCTCCGGCTGCTCAAGGCTAGAAGAGATTCAGTGTTTTCCAAGGAACATGAAAGAATTAAATCTATC TGATACTGCGATCAGAAAAATTCCATCATCAATCGGTCATCTCACTGCACTTGAGGTACTGAATTTAACTAACTGCAAAA GGCTTCAACACTTGCCCATGGGAATGAGTAACTTGACCTCTCTTGTTAAGCTCATGATAACGGGCTGCTCAAAGCTTGAG CATATTCAAGATTTGCCAACGGGCCTGAAAGAGCTCTATCTTGCTGAGACGGCTATTAGAGAACTGCCATCGTCAATTTG TCATCTCTCTGAACTTGTTGTATTCGATGCCGAGAACTGCCAAAAGCTTCAAGATTTGCCTACAGAAATGGGTAACTTAA ACTCTCTATCTATGCTAAAGTTATCTGGCTGCTTAGAGCTTGAGGACATCCACGATCTTCCACGGAACCTAAAGATTTTG AATCTAGCTGAGACTCCTATAAGGAAAATGCCATCATCATTTGAAGATCTCACTGAACTAATTTCAGTAGATTTAAATCA TTGCAAAAGGCTGCAACATCTTCAAATGGGATCTTACAAGTCCTTAGTCAGGATTGAGCTTTCTGGCTGCTCAGACCTGG ATTCTATTATTGGTTTCTCACTTCAAGACATGGGACAACATCATATAGATGGGATTGAGAAAGTGAGGTTATGTGGGCCT CCTCCATGTAATGTCATCTTTATTTGGGAGAACTGGAGAACATTTCATGTCATACCAGGGGAGAAAATGGGCTCCAAATG TTGTATGAAGCTTACGCCATTTTTAGCCTCGCCATATCGATCGAAGCTGCCTTCTTCATTTTTATCCTCCTTGTACGCAT TGGTGTCGTTGTTGCTCAGTAATGCCAACCTACTCGACATACCTCAAGAGATATGTCATTTTCCTTCACTAAAGACATTG GATCTCAGCGGAAACGACTTTAGCAAACTTCCTAAAAGCATGAAGCAGCTTTGTAAGTTGGAAAGTCTTATATTATGTCG CTGCAAAAAACTCAAATCACTCCCAGAGCTTCCCCAATGTCTAGAGACTTTGAATGCACATGGTTGTGTGTCTCTCAAGA ATGTTCATAGGAGCTTCGAGCAGTTTCCTAGACATTGCACGTTCAGCAATTGTTTTAATATTTCTTCAGACTCTGTCAAG AATATTTTAGACAATAGTATAGCTCACATGGCCAGACACCCTTGCCAGAATCTCATCAAAGCACAAGTATCCAGTTTCTC TGTTCCGGCATTCACTGGTCTGAATTCCATCTTTCACTTGCAACGAAGTTCATCAGTGAAGATAAGGATTAATCATATTA TAAAGCTTTTGGGGTTTAAAATAACGGTTGTAGTTGCATTTTGGGATGACTCTCGCAATGCTGCTAGTTTCGGTATCAGG TGTGTCTGTAGATGGAAAAACAAGAAAGGTCTCTCACGTCGCTTAGAAAGAGTTTTCTACTGCTGGACTCCAGAGGAAGT TGCTCAAAGTGTTCTAGAAAATCACATGTTTGTCTTCTGTGATGTCTCAATGCATCTGGGTATTGCTGATGGGAATGACC ATGATATATTGGATGATCTAATTGTATTTGAGTTCGTTCCTGTTAACGGGAAGAACAGGGTTCTTGATGATTGTTGCACT ATTACAGAATGTGGAGTAGATGTAATTACTGAAAAAACAGACAAAGCAAGTCATGACTTGAGGCGGCCAGGTTCTGCCTT AGACTCCATGGAGCTTTCCTCTTATGTGTTACCACAATTCAAGAAGCGGAAACGAAGTTTCTCAGGATCAAAAGACATTG AAATGGAACACGACAGGTTGATCTTATCAGAAACAAATAGAAGGGTAGCTTCTGATATGGCTCCTCTTTCTTCATCTTCT TTGTCTCCTCGTCCGAGATACGACGTTTTCTTGAGCTTCTATGAAGATGTCCGAAGAACATTTGTCAGCTATCTAATCAA GGAATTTAAATGGCTAGGAATCACTGCAGTATACAGCGGATTAGTGGGATGCGAGGTGACAAGTTATCCTGAGGTCACAG AAGCCATTAAGAAATCAAGGATATCAGTTGTCATTCTTTCAAAAAATTATGTTTCTTCAAGTAGGTGCTTGAATGAATTG GTGGAGATCATAACATGGAGTAAAGAAACATGGGGATACCGAGTGATACCAGTTTATTACGAAGTGGATCCATCTTATGT AAGGAAGCAGACCAAAACTATTGGAAAGGGCTTGGTGGGAACATTTTTGGGGAAAGTAGAGAAGCCAGAGGTGAAATGGA GGAGAGCTTTGACATACATTGTCGATGAAGTTGGTGAATCTTCCCAGGACTGGAATGATGACACGAAAATGATTGAGAAG ATTGCTACTAATGTTTCAAAACAAGTAGATGTCATGGAATCAAATGGATTTGATACAGTGTTTATTAAGGAGACAGAGGA CATTGAAGAGTTTGAGACAAACATCTGGGATAAGTTAGATGGTGTGCACATCATCCCGAGCTGGTATATGTATGCATTCT CTTTGATTTATCTGTGTCTTCTTGCTTCCCAAAGTGATTACATTACCCCTTCTGTATATATATGA |
| AA seq | Len:1595 aa MASDTNSLRYKVYFSFHKGEDTIRYSFVSHLSASLRRKGLIPSASLFVDNCSNGTRTEKHNFKAFVVVLSEKYVLSSECL DELAEIVDRQRNNQNVVVPVFYSITQSEVMHKSRLGILRDTFPLESNSAERVTRWIGALKKTVESYKPRMDYGDCELVEE IARDVYEKMFPTKRIGIYSRLLELENFLCKQPWGVRSIGIWGMPGIGKTTLAKAAFDQFSGDYEVSCFIKDFDKEFHMKG IYYLLQEYLGGTVREELGINNYVMEPEPKRVLIVLDNVCKPLDADAFLNGFDWFGPGSLIIITSRDKQVFVQCGVNQIYE VQGFNVDEAKKLFSSGIDWSKRSGLDTLEPYLRSVIQYSSGNPLALSFYGKELLPKNIEEIETELLSLKQIPPPLIMEAI KISYYTLNDSERTMFLDIACFFRGENVDYVMQLFEGCGFFPHVGISVLVDKCLVTILESKMQMHDLIQVVAKEISNEETV QLERHCRLWDASIIQSLLEDKEPKSIGESTGIEDIEAIFLDISNLKFYVNPNAFKSMHNLRFLKIYSSNHGKHQGLGIYK SLESLPNELRLLHWENYPLNYLPHDFDPSHLVELNMPYSKLEKLWDGIKNLEMLKTIKLCHSQELVEINDISNAQNVEVI DLQGCKKFPSFPATGHLQHLRVINLSGCVEIKSFTEVPPNIEALYLSGTSIREILTLTTGLTSQCRNCIDCLHVQTLDFL RVLDLSGCSRLEEIQCFPRNMKELNLSDTAIRKIPSSIGHLTALEVLNLTNCKRLQHLPMGMSNLTSLVKLMITGCSKLE HIQDLPTGLKELYLAETAIRELPSSICHLSELVVFDAENCQKLQDLPTEMGNLNSLSMLKLSGCLELEDIHDLPRNLKIL NLAETPIRKMPSSFEDLTELISVDLNHCKRLQHLQMGSYKSLVRIELSGCSDLDSIIGFSLQDMGQHHIDGIEKVRLCGP PPCNVIFIWENWRTFHVIPGEKMGSKCCMKLTPFLASPYRSKLPSSFLSSLYALVSLLLSNANLLDIPQEICHFPSLKTL DLSGNDFSKLPKSMKQLCKLESLILCRCKKLKSLPELPQCLETLNAHGCVSLKNVHRSFEQFPRHCTFSNCFNISSDSVK NILDNSIAHMARHPCQNLIKAQVSSFSVPAFTGLNSIFHLQRSSSVKIRINHIIKLLGFKITVVVAFWDDSRNAASFGIR CVCRWKNKKGLSRRLERVFYCWTPEEVAQSVLENHMFVFCDVSMHLGIADGNDHDILDDLIVFEFVPVNGKNRVLDDCCT ITECGVDVITEKTDKASHDLRRPGSALDSMELSSYVLPQFKKRKRSFSGSKDIEMEHDRLILSETNRRVASDMAPLSSSS LSPRPRYDVFLSFYEDVRRTFVSYLIKEFKWLGITAVYSGLVGCEVTSYPEVTEAIKKSRISVVILSKNYVSSSRCLNEL VEIITWSKETWGYRVIPVYYEVDPSYVRKQTKTIGKGLVGTFLGKVEKPEVKWRRALTYIVDEVGESSQDWNDDTKMIEK IATNVSKQVDVMESNGFDTVFIKETEDIEEFETNIWDKLDGVHIIPSWYMYAFSLIYLCLLASQSDYITPSVYI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | RRS1; disease resistance protein RRS1; K16225 probable WRKY transcription factor 52 (A) |