Names & Information
Knowledge of BnaC03G0604300ZY:
| Gene Name | BnaC03G0604300ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2991 nt ATGGCTACGTCTTCTTTAACTCTTTTGGCTCCTCGCAATTGGAAATATCATGTTTTCCCAAGCTTCCATGGGGCAGATGT ACGCACAAACTTTCTCAGCCACGTTCTAAAGGAGCTCAGAAGCAAAGGAATCGACTCTTTCATTGACAATGATATAGAGA GGAGTAAGCTGATTGGTCCTGAGCTCGTAGAAGCTATTAGAGGATCTAGGATTGCGATTGTCTTGCTCTCGAGGAACTAT GCTTCTTCGACATGGTGCTTGAACGAGCTGGTGGAGATCATGAAGTGCAGAGAAGAGTTTGGTCAAACAGTAATGCCCCT TTTCTATGAACTGGATCCAACTGATGTAAAGAAGCAAACTGGTGATTTTGGGAAAGTCTTGGGAAAAACTTGTAGAGGAA AAGAAAAGGAAGACATCCAAAGGTGGAAACGTGCTTTGACCGAAGTGGCCCAAATCGCAGGTTTCCATTCAGCAAAAGGG GAGAATGAAGCAGAGCTGATTGAATATATTGCCACTGATGTTTCCAACAAGTTGAACCTTTCAGCACCATGCAGTGACTT TGACGGCTTAGTTGGGATGAAATCTCGTATGGCAGAAATGAGACGAGTGTTGCAGTTAGATTCGGATGAGGTGAGAAAAA TAGGGATCTTGGGTCCGCCTGGGATTGGTAAGACCACCATTGCTAGATCTATATTCAACCGATACTCCCAAGATTTCCAA CTAAGTGTCTTTATGGACAATATAAAAAAAAAGTATGTGATAATGGCTTGTTCTGATGACTACAGTGTGAAGTTGGATTT GCAGAAGCAGTTTATGTCTCAACTAACCAACGATACGGGTATAAAGATTCCACATTTGGGAGTTGCCAAAGACAGGTTGA AAGACAAGAAAGTTCTTGTCGTCCTTGATGATGTGGATCAGTTAGTACAACTAGAAGCCATGGCAAAAGAAACTAGTTGG TTTGGTCCTGGGAGTCGGATTATCATCACAACACAAGATGAGAACGTTTTAAAAGCGAGTGGGATCGACCATATACACAG GGTGAATTTACCATCAGATGATGAGGCTCTTCAAATGTTTTGCTTGTATGCTTTTGGTCAAAAATACCCCAAGGATGGTT TCAAGAAGCTTGCTTGTGAAGTTAGGAGTCTTGTAGGTGGACTTCCGTTGGGGCTGAGGGTTATGGGATCCTATTTTCGA GGAATGTCCGAGCAAGATTGGAGAGAAGCACTACCAAGGTTAAAGATCCACCTTGACCGAAATGGAGAAATTGCGGGCAT TTTAAAGTTTAGTTATGATGCTTTAAATGATGAAGATAAAAGATTATTTCTTCATATAGCCTGCTTTTTTAGTGGTGAAC CAGTTGATATGGTGGAAAGATGTCTAGAAAAATGTTTTCAGGATGTGAGACAAGGACTTCGTGTCTTATCTGAAAAATCT CTCATATATAGCAAATCAGGATTGATAATGATGTCTACGTTACTATTCCAACTAGGAAGACAAATTGTGCAAAAAGAATC TATTAGCGAACCTGGAAAACGCCAGTTTTTGAATGATGCAATTGATATTGGTGAAGTACTTAGTGATGATAAAGCAGGTA ATAGCAGTGTCATAGGAATAGATCTCGAGTGGAATAAGGACATAACATGGACAAGTGAAAGAGCCTTTGAAAGATTGTCT AATCTTCAATTCATAAGAATCCTCGGCAAAGGCGTTAACCCGCTAAGTATGAACTACATATCCCGAAAACTTAAAGTACT AATTTGGCCGATGTTCCCCATGCCATGTTTTCCTTCAAGATTTAATCCAGAGTTCCTAGTCAACCTATTCGTGCGGAATA GCAATCTTGAGAAACTGTGGGAAGAAAATAAACCGCTCAAAAATATAAAGTGGATGGATTTGGCTCTTTCAAGAAGATTG AAGGAGCTTCCTGATCTCTCAACTGCCATTAATTTATATTATTTGGATCTCAGCTATTGCTCAAGCCTGGTGAAGCTCCC TTCCTCTATTGGGAATGCAACTAATCTTGAAAAATTGAGTCTCAACTATTGCTCAAGTCTGGTGAAGCTCCCTTCCTCTA TTGGGAATGCAATTAATCTCAAAACATTGAGTCTCAAAGGTTGCTCAAGTATGGTGAAACTTCCTTCCTCTATTTGGAAT ATAGTTAATCTTGAAGAGTTGAATCTCGAAAATTGCTCGAACCTTGTGGAGATCCCTAGCTTGTTGAGATCGGAAATAGA GAAATGCACCAAGTCAGATTGCTCGAGAGGTAGTGGAAAGATCATCAACCGTCTCCCTATTATAGCGGGCTTACTTTCCA ACCCGCAATTTGAAAAGAATAACACCATTAAGTATTCTGAGAGTTCAACAAACATTGAAGAGCTTGATCCGTGGATAGGG AGAATACTTCGTCTACGTCGACTTGTACTAAGCGGAATGAGGAAGCTGGTATCACTCCCTCAGCTACCGGATTCGTTATT GGAACTAGATGCAGAAAATTGTGAGTCCCTAGAGAGACTACACTGCTCCTTTCCCAATCAAGATATTCGTCTCAACTTTG CAAACTGCTTTAAACTAAATCAAGAAGCAAGAGATCTCATCATCCAGATGCCAACTAATAAATATGCGGTGTTTCCCACT GAAAATGTGCCTATATGCTTCAGTTACCGATCTTCTGGGAGTTCCTTGACTGTGAAGTTGAATCGATTGCCCGTTGGTAA ATCAACCAAATTTAAGGCTTGCATCTTATGTGCTTATGATGACGAAAATAACTTTGGACTTTGGGAAACCGCATCTGTCT TTTGTACCATCACGTTCGGAGGGAATGCTTCCATTGCTTGTAATAAAAGGGTAGAACGAGTTTTGCCGGGGAATCTGTGC ACATTCGAGGTAGAGGTTGAAACAGAGGAGGTCCCTTTTGAAGATTTTGAATCTTCAGATATTGAGCTTGTTCGTGAAGA TGATGGTAACAAGATACTACCTCTTTTGTGA |
| AA seq | Len:997 aa MATSSLTLLAPRNWKYHVFPSFHGADVRTNFLSHVLKELRSKGIDSFIDNDIERSKLIGPELVEAIRGSRIAIVLLSRNY ASSTWCLNELVEIMKCREEFGQTVMPLFYELDPTDVKKQTGDFGKVLGKTCRGKEKEDIQRWKRALTEVAQIAGFHSAKG ENEAELIEYIATDVSNKLNLSAPCSDFDGLVGMKSRMAEMRRVLQLDSDEVRKIGILGPPGIGKTTIARSIFNRYSQDFQ LSVFMDNIKKKYVIMACSDDYSVKLDLQKQFMSQLTNDTGIKIPHLGVAKDRLKDKKVLVVLDDVDQLVQLEAMAKETSW FGPGSRIIITTQDENVLKASGIDHIHRVNLPSDDEALQMFCLYAFGQKYPKDGFKKLACEVRSLVGGLPLGLRVMGSYFR GMSEQDWREALPRLKIHLDRNGEIAGILKFSYDALNDEDKRLFLHIACFFSGEPVDMVERCLEKCFQDVRQGLRVLSEKS LIYSKSGLIMMSTLLFQLGRQIVQKESISEPGKRQFLNDAIDIGEVLSDDKAGNSSVIGIDLEWNKDITWTSERAFERLS NLQFIRILGKGVNPLSMNYISRKLKVLIWPMFPMPCFPSRFNPEFLVNLFVRNSNLEKLWEENKPLKNIKWMDLALSRRL KELPDLSTAINLYYLDLSYCSSLVKLPSSIGNATNLEKLSLNYCSSLVKLPSSIGNAINLKTLSLKGCSSMVKLPSSIWN IVNLEELNLENCSNLVEIPSLLRSEIEKCTKSDCSRGSGKIINRLPIIAGLLSNPQFEKNNTIKYSESSTNIEELDPWIG RILRLRRLVLSGMRKLVSLPQLPDSLLELDAENCESLERLHCSFPNQDIRLNFANCFKLNQEARDLIIQMPTNKYAVFPT ENVPICFSYRSSGSSLTVKLNRLPVGKSTKFKACILCAYDDENNFGLWETASVFCTITFGGNASIACNKRVERVLPGNLC TFEVEVETEEVPFEDFESSDIELVREDDGNKILPLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | - |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |