Names & Information
Knowledge of BnaC03G0609400ZY:
| Gene Name | BnaC03G0609400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g61980D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:2778 nt ATGGGATCAACGTCTTCATCGACAAAAACGAAACCAAAGGCAAAGATCTCAGCAATCGAGGATCGCGCTCGCCATCTTCT CGAGCATGTATACGGAATCAAAGTGGTGCTTGAACGAGCTGGAGAAGATCAAGGATTTTGGGAATTGGCTAAGACTTGCA AAGGTGAAAACGATGAAGGCGACTACATCAATCAAATTGTAGGGGAAGTCATAAAGGTGTTATCTTCTGATCTGGAAAGA CATATCCTACGCTGTGTTTTTCTTCATGATGTCCGTAAATTGTGGAAAGACTGCAAGATGAATCGGGACATTTTCATGAG AGATTTGTTGAAGGATGATGACGTGAAACAACAAGTCTCTGACCTGTCACCTGAATCTTTGAAGGCTCTCCTGCTCAGTA GCAGGATCTTTATCACGACTAGCGATAAGTCAGTGATCGAAGGGGTGGTTGATGACACATATGAAGTCCTGAGACTATCT GGCAGAGACAGCTTTCAGTACTTCAGCTTTTTTGCGTTTAGTGGTAAGCTCTGTCCTCCGGAGGATAATTTTTTGAATCT CTCTAGATTGTTTGTGGACTATGCCAAAGGCAATCCATTAGCTCTCAAGATATTGGGTGTTGAGCTTAGTGAGAAAGACG AGACTCACTGGGAAGAGACACTTCGAAGTGTCTTGCAGATAAGCTACAATGGACTCGGTCAGCTTCATAAAGATGTGTTT CTTGACGTAGCTTGTTTCTTTAGATCAGGGGATGAGAATTACGTGAGGTGTTTGGTGGAGTCATGTGACACTGATCTTCT TGATGCTGCGAGTGAGATAAAGGATCTTGCCAGGTCACGGAGGCTGTGGAACCATAAAGGCGTTGTTGGTGCGCTGAAGA AAAGAACTGGAGCAGGCAGTGTGAGGGGCATTTTTCTTGACATGTCTGAACTGAAGGAGAAGCTTCCTTTGGACAGATGT ACTTTCACTGAGATGCGTAATCTCAGGTACCTCAAATTCTATAGTTCTCGTTGTCATAGAGAATGCGAAGCTGACTGCAA ACTAAACTTCCCTGAGGGACTTGATTTTCCGTTGGATGAAGTAAGATATCTCTTTTGGCTGAAATTCCCTTTGAAGAAAC TTCCGAAAGACTTCAACCCCAGGAATCTTACCGACCTTAACCTGTCTTTCAGCGAGATTGAAGAGGTTTGGGAAGGTGTT AAGGATACACCGAAGTTAAAGTGGGTTGATCTTAGCCACTCAAGCAAGTTATGCAATCTGACAGGGTTGCTAAATGCTGA AAACCTCCAGAGATTGAATCTCGAAGGGTGCATGAGTTTGGAGGAGTTGCCTCGTGAGATGAAACGTATGAAAAGTCTTG TTTTCCTCAACATGAGAGGATGCACGAGTCTCCGGGTTCTTCCGCATATGAATCTGATCTCTATGAAAACTCTCATCCTC ACCAACTGCTCAAGCCTTCAGACATTCCAGATGGTTTCGACTAATCTAGAAAATTTACACTTAGATGGAACTGCCATTGG TCAACTTCCTACAAACATGTGGAAGCTCCAGAGACTGATTGTATTGAACTTGAAAGACTGCAAAATGTTGGTGGCCGTTC CAGAATGCCTGGGAAAGCTGAAAGCTCTGCAAGAACTGGTGCTTTCTGGTTGTTCAGAGCTCAAGACTTTTCCAATTCGC ATTGAAAACATGAAATCCTTGCAGATTTTATTGCTTGATGGGACATCAATTACAGACACGCCCAAGATGTTGCAGTTGAA TAGCTCAAAAGTGGAAGACTTGCCTGAACTAAGACGTGGTATGGACGGCATATCCTCATTGCAGCGTCTATGCTTAAGCA TGAATGATATGATCACCAACTTGCGAATCTACATCAGTGTACTATGTCATCTGAAACTGCTTGACCTGAAATTCTGCAAG AATCTCACTTCAATTCCACTGCTTCCACCAAATCTAGAAATCTTAGATGCACATGGCTGTGGCAAACTGAAGACACTGGC AATGCCGATGGCCATTCTTAAGCATATGGAGAAGGTTCACTCTAAGTTCATTTTCACCAACTGCAAGAGTCTTGAACAAG CTGCAAAGAATAGCATCACAACGTATGCTCAAAAGAAAAGCCAGCTAGATGCGCTTAGATGTTATAAAGAGGGACATGCT TCAGAAGCTTTATTCATTACTTCCTTTCCAGGGAGTGAAGTACCTTCATGGTTTGACCATCGCATGATTGGATCAACATT AAAGCTGAAGTTTCCACCACATTGGTGTGACAACAGACTTTCAACAATAGTTCTATGCGCTGTTGTTGCATTCCAAAATG AGATCAACAGTTTCTCAATAGAATGCACTTGTGAGTTCAAAAACGAACTTGGAACATGTACACGTTTCAGCAGCATTCTT GGTGGAGGTTGGATTGAACCACGCAAGATTGATTCAGACCATGTGTTTATCGGTTACACCAGTTGCTCCCACATAACAAA ACATGTAGAAGGTTCGCAAGGACATCAGAAATGTGTTCCTACCGAGGCGTCAATAAAATTCAAAGTGATAGATGGATCTG GTGAGATTATGAATTGTGGTTTAAGTTTGGTGTACGAGGAATCAAACCATGTCGTTATTGAAGGAGACAGTGATGGAACT TCTTCAGGAAGAGCTTTATCAGTTGTAGAGAGTACAATGAGCTCTGCTACTCGGCTTCTGTCCGTTGTTGTGAGGTATTT GTGGCTAGGTGTTGTGTTCTTTTCGGTTTTTGGGTTTGCTAGATTTTATTTTCACTAG |
| AA seq | Len:926 aa MGSTSSSTKTKPKAKISAIEDRARHLLEHVYGIKVVLERAGEDQGFWELAKTCKGENDEGDYINQIVGEVIKVLSSDLER HILRCVFLHDVRKLWKDCKMNRDIFMRDLLKDDDVKQQVSDLSPESLKALLLSSRIFITTSDKSVIEGVVDDTYEVLRLS GRDSFQYFSFFAFSGKLCPPEDNFLNLSRLFVDYAKGNPLALKILGVELSEKDETHWEETLRSVLQISYNGLGQLHKDVF LDVACFFRSGDENYVRCLVESCDTDLLDAASEIKDLARSRRLWNHKGVVGALKKRTGAGSVRGIFLDMSELKEKLPLDRC TFTEMRNLRYLKFYSSRCHRECEADCKLNFPEGLDFPLDEVRYLFWLKFPLKKLPKDFNPRNLTDLNLSFSEIEEVWEGV KDTPKLKWVDLSHSSKLCNLTGLLNAENLQRLNLEGCMSLEELPREMKRMKSLVFLNMRGCTSLRVLPHMNLISMKTLIL TNCSSLQTFQMVSTNLENLHLDGTAIGQLPTNMWKLQRLIVLNLKDCKMLVAVPECLGKLKALQELVLSGCSELKTFPIR IENMKSLQILLLDGTSITDTPKMLQLNSSKVEDLPELRRGMDGISSLQRLCLSMNDMITNLRIYISVLCHLKLLDLKFCK NLTSIPLLPPNLEILDAHGCGKLKTLAMPMAILKHMEKVHSKFIFTNCKSLEQAAKNSITTYAQKKSQLDALRCYKEGHA SEALFITSFPGSEVPSWFDHRMIGSTLKLKFPPHWCDNRLSTIVLCAVVAFQNEINSFSIECTCEFKNELGTCTRFSSIL GGGWIEPRKIDSDHVFIGYTSCSHITKHVEGSQGHQKCVPTEASIKFKVIDGSGEIMNCGLSLVYEESNHVVIEGDSDGT SSGRALSVVESTMSSATRLLSVVVRYLWLGVVFFSVFGFARFYFH* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |