Names & Information
Knowledge of BnaC03G0624400ZY:
| Gene Name | BnaC03G0624400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g63230D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3675 nt ATGGTCACTCGTCAGTCAACTCTTGATCAGTTCAACCAAGCCATACAAATCAGATCCTACCCGCCCGAAGTTCATCTCAT GGCTGCTAAATCTTCCTCCAAATTCGACGTGTTTCTCAGTTTCCGAGGCAAAGACACGCGTAATACCTTCGTATGCTATC TCAAAGATTTTCTTAAACGGAAAGGGATCGACGCGTTCATCGATGAGGAACTCCGACGTGGCGCCAACATCTCACTGCTT CTCGAAAGGATTGAACAGTCAAAGATCTCGATCGTCATTTTCTCGGAGAATTACGCGGATTCCAGGTGGTGCTTAGAGGA ACTGGAGAAGATCATGGACTGCAAGAAGACCTTCGATCAGGTAGTTTTACCAGTCTTCTACAAAGTTCGGGCCTCGGACG TGAGTTGTCAGACTGGGAAATTCGGAGCTCCGTTCGACAAACCCGAAGAGAGTTTCCGGAAGTATGAACATCGAATCCCG GCATGGAGAAAAGCCCTGAGTGATGCATCTGAAATCTCCGGCTATGTTCTTGAAGAGGACAGAACTGAGCTCGAGTTTGT TGACAATATTGCCAAAGAGACGTCCAGGTTGCTAAACAAGTTATCTCCATCCGAATTTCCTGGTCCAGGGATTGAATCGC GTACCATGGAACTGGAAAATTTAATGTGTTTTGAAGAGACGAGATGTGTTCGTATCGTTGGGGTTCTTGGGATGGCTGGG ATTGGAAAGACAACTGTTTCAAATTGTGTGTATGAGCGAAACTTGGATGGTTTCGATGGTTGCTGTTTTCTTTCAAATGT TCAAGACGAGTTAAAACTACAAACAATAGATCAGTTGCAGCAGAAACTCCTGCGTAAGCTATTAGATGACGAAAAGCTTG AAGTTGGAGCTTCTGTAGGAACACACAAAGTCTTAAAGGATCGTCTTCGGAACAAGAAGCTGTTTATTGTGCTCGACAAC GTGACCAATGAAAAACAAATAAGCCTTCTACTTGGGGAAGCGGGAAAAGAACTGTACCGACAAGGAACTCGGATCATTAT AACAACAAGGGACAAGAAACTGCTAGACAAGGTTGTGGATGGGACATATGTGGTTCCGAGATTGAACGGAAGAGAAGCTC TGGAGCTTTTCTGCTCGAAAGCATTTTCTACTAATCCCGACAACATGGCAGAGTACATGGATCTATCAAACAAGTTTGTG GATTATTCTATAGGGCTTCCACTAGCTCTGTGCTTGTTAGGTTCTGATCTTCGTAGGAAAGATATCCAATATTGGACGAA GAAACTGGAGGGACTAGAGAATCAGCTAGACAAGAATATCCAAAAAGAACTGAACACTAGTTATGAGGAACTATCCGATG AAGAGAAGAGCATATTTCTTGATGTGGCGTGTTTCTTTTATTCGGAGAAGTTTGATTCTGTTTCGAGGATTCTGAGCACT TACCGTGATGATGAGTCTAATGTGATAAATGATCTTGTTGATAAGTGTTTGGTGACCATTTCTGATAATCGGCTTGAGAT GCATGACCTACTGCTGAAAATGGGAAAGGTTATTGGTTATGAATCATCCATCAATGAGGTGGGTAAGCGTGGTCGGTTAC GGAACCCAAAAGATATTTGCCGCATCTTAAAAAATAAAAACAAGGGCACCAAGAAAACTAGAGGCATCTTCTTAGATATG TCTAATGTTAAAAGAATGGAGCTACCTTCTGATATTTTCACGAAGATGTTGAATCTCAAGTTCCTCAAATTCTACAATTG TTCCGAATGGTGTGAGAAGGATTGCAGATTACAACTTCCTGGTGGGCTTGATTACTTTCCAGATGAGCTGGTGTATCTCC ACTGGCAAGGGTACCCTCTGGATTATCTTCCAATGAACTTCGACCCGGAAAAGCTGGTTGTTCTTAATCTGCGTTATAGC AACATTGAGCAGTTGTGGAAAGAAGAGAAGGACACAGGAGAGTTGAGGTGGGTCGATCTCAGTTATTCAAAAGAGTTGCT GAATCTATCTGGCTTGTCGAAAGCTAAAAAACTCGAGAGGCTGGATCTTGAATGCTGTGAAAGTTTAGCCGAGTGTTCAT CGATCCAGGAGATGGAAAGTCTTGTTACACTGAATCTCAGAGATTGTCTAGAGCTCAAGAGTCTTCCAGAGGAAACCAAT CTGAAGTCTCTGAAGACTCTTATCCTCAGTGGTTGTTCAAAACTCATTAACTTTCCAACTATATCAGAAAACATAGAATC TCTATATTTGGATGGCACAGCGGTAGAAAGAGTTCCTGAATCCATAGGTTATCTCCGAAACCTTGCTGTGCTAAATCTGA AGAAGTGTTGCAGCTTGATGAGTCTTCCTGACAATTTTTGCAAGCTGAAATCTCTGAAAAAACTGATTCTCTCTGGTTGT TCAAGGCTAGAGAGTTTTCCGGACATCAATGAAGACATGGGTAGCTTAGAGATTCTGCTCATGGATGAGACTGCCGTCAA TCAAATTCCCAGAAAAATGCATATGAGCAATCTCAAGCTGTTCTCATTTGGTGGATCTAAAGTCCAGGATCTCACATGTT TGGAATTGCTTCCTTTCTCTGGCTGCTCTGGGTTATCAGAAATGTATCTCACAGATTGTAATCTGTACAATTTGCCAGAA AACTTTAGCTGCTGCTTATCCTTCCTGCAGTCTTTATGCTTGAGCAGAAACAATATCAAGAATCTACCTGGAAGCATCAA GAAACTTCATCATCTAAAGTCCCTTTACTTGAAGCATTGTGAAAAGCTCATTTCTCTCCCAGTGCTTCCATCAAATCTGC AGTACATGGATGCTCATGGCTGTACCTCACTTGAAACAGTAGCAAAACCCATGACGCTTATTGTAGTAGCTGAGAGGACC CATTCTACTTTCGTCTTCACTGATTGTTTCAAGCTAAACCAAGATGCACAAGAAAATATTATGGCTCATACTCAACTCAA GAGTCAAATACTGGTGAATGCATCTCTTCAACGTAATCATAAGGGATTAGTTTTGGCACCTCTGTCTAGTGTAACTTTTC CCGGAAACGATTTGCCATTATGGTTCCGCCATCAGAGAATGGGATCTTCCATGGAAATTGACCTGCCTCCACACTGGTGT GACAATAAATTCATTGGACTTTCTCTCTGCGTAGTTGTCTCGTTCAAGAACTATGAAGACAAAACCAGCCGTTTCTCAGT GATATGCAAGTGCGAGTTCAAACTAAATGATGATGATTGCATCAGCTTTACTTGCAGACTTGGGGGACGGAAAGAGCAAT TTGGATCATCTAGCCTCAAGGAAGAACCAAGAAGACTCGACTCTGATCATGTCTTCATCAGCCAAAACAGCTGCTTCCAT GCCAAGAAAGAGCATGGTCTCAACCGATGTTGCAACACGACCGCCTCATTCAAATTCTATGTTGTTGATGGTGTAGATTG CTGTGAAGTGGTGAAATGTGGGATGAGCTTGTTGTATGCCCCGGATGAGAATGATTATATGTTTCAGGAATTACAGGAGA GTAACCTCGAGAAAGCGGTATCATCTGGAAAAGAAACAGATCTAAATGCAACCGCTATAGATCATGAAGCTGCTATGTCC AAGAGAGGCCGTAATTATCTACAAGAAGAAGAGCAACTGAACGGGAAAAGATTACGTTTTTCCAACAAAGTCTAA |
| AA seq | Len:1225 aa MVTRQSTLDQFNQAIQIRSYPPEVHLMAAKSSSKFDVFLSFRGKDTRNTFVCYLKDFLKRKGIDAFIDEELRRGANISLL LERIEQSKISIVIFSENYADSRWCLEELEKIMDCKKTFDQVVLPVFYKVRASDVSCQTGKFGAPFDKPEESFRKYEHRIP AWRKALSDASEISGYVLEEDRTELEFVDNIAKETSRLLNKLSPSEFPGPGIESRTMELENLMCFEETRCVRIVGVLGMAG IGKTTVSNCVYERNLDGFDGCCFLSNVQDELKLQTIDQLQQKLLRKLLDDEKLEVGASVGTHKVLKDRLRNKKLFIVLDN VTNEKQISLLLGEAGKELYRQGTRIIITTRDKKLLDKVVDGTYVVPRLNGREALELFCSKAFSTNPDNMAEYMDLSNKFV DYSIGLPLALCLLGSDLRRKDIQYWTKKLEGLENQLDKNIQKELNTSYEELSDEEKSIFLDVACFFYSEKFDSVSRILST YRDDESNVINDLVDKCLVTISDNRLEMHDLLLKMGKVIGYESSINEVGKRGRLRNPKDICRILKNKNKGTKKTRGIFLDM SNVKRMELPSDIFTKMLNLKFLKFYNCSEWCEKDCRLQLPGGLDYFPDELVYLHWQGYPLDYLPMNFDPEKLVVLNLRYS NIEQLWKEEKDTGELRWVDLSYSKELLNLSGLSKAKKLERLDLECCESLAECSSIQEMESLVTLNLRDCLELKSLPEETN LKSLKTLILSGCSKLINFPTISENIESLYLDGTAVERVPESIGYLRNLAVLNLKKCCSLMSLPDNFCKLKSLKKLILSGC SRLESFPDINEDMGSLEILLMDETAVNQIPRKMHMSNLKLFSFGGSKVQDLTCLELLPFSGCSGLSEMYLTDCNLYNLPE NFSCCLSFLQSLCLSRNNIKNLPGSIKKLHHLKSLYLKHCEKLISLPVLPSNLQYMDAHGCTSLETVAKPMTLIVVAERT HSTFVFTDCFKLNQDAQENIMAHTQLKSQILVNASLQRNHKGLVLAPLSSVTFPGNDLPLWFRHQRMGSSMEIDLPPHWC DNKFIGLSLCVVVSFKNYEDKTSRFSVICKCEFKLNDDDCISFTCRLGGRKEQFGSSSLKEEPRRLDSDHVFISQNSCFH AKKEHGLNRCCNTTASFKFYVVDGVDCCEVVKCGMSLLYAPDENDYMFQELQESNLEKAVSSGKETDLNATAIDHEAAMS KRGRNYLQEEEQLNGKRLRFSNKV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |