Names & Information
Knowledge of BnaC03G0678900GG:
| Gene Name | BnaC03G0678900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g61670D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:3588 nt ATGGAGAAGCTTGAATCACTCCCACCGCTTCCGGATTCACTATGGGCACTAGATGCAGAGAATGGTGAGTCCCTAGAGAG ACTAGGTAGCTCCTTTAGGAACCCAGATATCAATCTCAGCTTCCTTAACTACTTCAAACTAAATCAAGAAGAGAAAGATC TCATCATCCAGACGCCGAGTAATGAATGTGCGGTCTTTCCTGGTGAAGAAATGCCTCAGTGCTTCACTTACCGATCATCT GGGAGTTCATTAACTGTGAAGTTGAATCAAACTCCTCTTGGCACATCAACCAAATTCAAGGCTTGCATCGTATGTGCTGG TGAGGACGAGAAGGGCTTTACAGAATGGGAACGAGCATCTGTCTGTTGTAGCATCACCACGCCAGGAGGGATCGCCCTCA GTTCTTGTCTTAAAACAATAGAACAGTTTTTGCCTGGACATCTGTACACATTCGAGTTTGAGGTTGAAACAGATGAGGTG ACTTCCACTGAGCTTGTTTTTGAGTTCGAGGTTGACTATGCGGATTTGATCAAAAAGGGCAAAACACTGGAGATAAAAGA ACGTGGGATTATGCTGGTAAACATGATTGAGAGCTTCGGAGATGACAACTCTTGTATTTTATTTAATTGGCTTGATGTCT TTGTTAGTTTCGAAGCCTCCAATACTATATCTATTGTTATGAATCTGAAACAAACCTTGAAGATTGAGCAATATAAGCAT CATAAGCTCCACGTCCACACTGTTATGATCGTAGAACGTGTACGCACAAACTTTCTCAGCCACGTTCTCAAGGAGCTCAG AAGCAAAGGAATCGACTCTTTCATTGACAATGATATAGAGAGGAGTAAGCTGATTGGTCCTGAGCTCGTAGAAGCTATTA GAGGATCTAGGATTGCGATTGTCTTGCTCTCTAGGAACTATGCTTCTTCGACATGGTGCTTGAACGAGCTGGTGGAGATC ATGAAGTGCAGAGAAGAGTTTGGTCAAACAGTAATGCCCCTTTTCTATGAACTGGATCCAACTGATGTAAAGAAGCAAAC TGGTGATTTTGGGAAAGTCTTGGGAAAAACTTGTAGAGGAAAAGAAAAGGAAGACATCCAAAGGTGGAAACGTGCTTTGA CGGAAGTGGCCCAAATCGCTGGTTTCCATTCAGCAAAAGGGGAGAATGAAGCAGAGCTGATTGAATATATTGCCACTGAT GTTTCCAACAAGTTGAACCTTTCAGCACCATGCAGTGACTTTGACGGCTTAGTTGGGATGGAATCTCGTATGGCAGAAAT GAGACAAGTGTTACAGCTAGATTCGGATGAGGTGAGAAAAATAGGGATCTTGGGTCCGCCTGGGATTGGTAAGACGACCA TTGCTAGATCTATATTCAACCGACACTCCCAGGATTTCCAACTAAGTGTCTTTATGGACAATATCAAAAGAAAGTATGTG ATAATGGCTTGTTCCGATGACTACAGTGTGAAGTTGGATTTTCAGAAGCAGTTTATGTCTCAACTAACCAACGAGACGGG TATCAAGATTCCACATTTGGGAGTTGCCAAAGACAGGTTGAAAGACAAGAAAGTTCTTGTCGTCCTTGATGATGTGGATC AGTTAGTACAACTAGAAGCCATGGCAAAAGAAACTAGTTGGTTTGGTCCTGGGAGTCGGATTATCATCACAACACAAGAT GAGAACGTTTTAAAAGCGAGTGGGATCGATCATATACACAGGGTGAATTTACCATCAGATGATGAGGCTCTTCAAATGTT TTGCATGTATGCTTTTGGTCAGAAATACCCTATGTCTGGTTTCAACGAGCTTGCTTATGAAGTTACTAGTCTTGTAGGTA AACTTCCACTAGGGCTAAGGGTTATGGGCTCCCATTTTCGGGGAATGTCCGAGCAAGATTGGAGAGAGGCACTACCAAGG TTAAGGACTCACCTTGACCGAAATGGAGAAATTGCGGGCATTTTAAAGTTTAGTTATGATGCTTTAAATGATGAAGATAA AAGATTATTTCTTCATATAGCCTGCTTTTTTAGTGGTGAACCAATTGATATGGTGGAAAGATGTCTAGAAAAATGTTTTC AGGATGTGAGACAAGGACTGCGTGTCTTATCTGAAAAATCTCTCATATATAGCAAATCAGGATTGATAATGATGTCTACG TTACTATTCCAACTAGGAAGACAAATTGTGCAAAAAGAATCTATTAGCGAACCTGGAAAACGCCAGTTTTTGAATGATGC AATTGATATTGGTGAAGTACTTAGTGATGATAAAGCAGGTAATAGCAATGTCATAGGAATAGATCTCGAGTGGAATAAGG ACATAACATGGACAAGTGAAAGAGCCTTTGAAAGATTGTCTAATCTTCAATTCATAAGAATCCTCGGCAAAGGCGTTAAC CCGCTAAAGTTCCTAGTCAACCTATTCGTGCGGAATAGCAATCTTGAGAAACTGTGGGAAGAAAATAAACCGCTCAAAAA TATAAAGTGGATGGATTTGGCTCTTTCAAGAAGATTGAAGGAGCTTCCTAATCTCTCAACTGCTATTAATTTATATTATT TGGATCTCAGCTATTGCTCAAGCCTGGTGAAGCTCCCTTCCTCTATTGGAAATGCAACTAATCTTGAAAAATTGAGTCTC AACTATTGCTCAAGTCTGGTGAAGCTCCCTTCCTCTATTGGGAATGCAATTAATCTCAAAACATTGAGTCTCAAAGGTTG CTCAAGTATGGTGAAACTTCCTTCCTCTATTTGGAATATAGTTAATCTTGAAGAGTTGAATCTCGAAAATTGCTCGAACC TTGTGGAGCTCCCTAGCTTGTTGAGATCGGAAATAGAGAAATGCACCAAGTCAGATTGCTCGAGAGGTAGTGGAAAGATC ATCAACCGTCTCCCTATTATAGCGGGCTTACTTCCCAACCCGCAATTCGAAAAGAATAACACCATTAAGTATTCTGAGAG TTCAACAAACATTGAAGAGCTTGATCCGTGGATAGGGAGAATACTTCGTCTACGTCGACTTGTACTAAGCGGAATGAGGA AGCTGGTATCACTCCCTCAGCTACCGGATTCGTTATTGGAACTAGATGCAGAAAATTGTGAGTCCCTAGAGAGACTACAT TGCTCCTTTCCAAATCAAGATATTCGTCTCAACTTTGCAAACTGCTTTAAACTAAATCAAGAAGCAAGAGATCTCATCAT CCAGATGCCAACTAATAAATATGCGGTGTTTCCCACTGAAAAAGTGCCTATATGCTTCAGTTACCGATCTTCTGGGAGTT CCTTGACTGTGAAGTTGAATCGATTGCCCGTTGGTAAATCAACCAAATTTAAGGCTTGCATCTTATGTGCTTATGATGAC GAAAATAACTTTGGACTTTGGGAAACCGCATCTGTCTTTTGTACCATCACGTTCGGAGGGAATGCTTCCATTGCTTGTAA TAAAAGGGTAGAACGAGTTTTGCCGGGGAATCTGTGCACATTCGAGGTAGAGGTTGAAACAGAGGAGGTCCCTTTTGAAG ATTTTGAATCTTCAGATATTGAGCTTGTTCGTGAAGATGATGGTAACAAGAGACTACCTCTTTTGTGA |
| AA seq | Len:1196 aa MEKLESLPPLPDSLWALDAENGESLERLGSSFRNPDINLSFLNYFKLNQEEKDLIIQTPSNECAVFPGEEMPQCFTYRSS GSSLTVKLNQTPLGTSTKFKACIVCAGEDEKGFTEWERASVCCSITTPGGIALSSCLKTIEQFLPGHLYTFEFEVETDEV TSTELVFEFEVDYADLIKKGKTLEIKERGIMLVNMIESFGDDNSCILFNWLDVFVSFEASNTISIVMNLKQTLKIEQYKH HKLHVHTVMIVERVRTNFLSHVLKELRSKGIDSFIDNDIERSKLIGPELVEAIRGSRIAIVLLSRNYASSTWCLNELVEI MKCREEFGQTVMPLFYELDPTDVKKQTGDFGKVLGKTCRGKEKEDIQRWKRALTEVAQIAGFHSAKGENEAELIEYIATD VSNKLNLSAPCSDFDGLVGMESRMAEMRQVLQLDSDEVRKIGILGPPGIGKTTIARSIFNRHSQDFQLSVFMDNIKRKYV IMACSDDYSVKLDFQKQFMSQLTNETGIKIPHLGVAKDRLKDKKVLVVLDDVDQLVQLEAMAKETSWFGPGSRIIITTQD ENVLKASGIDHIHRVNLPSDDEALQMFCMYAFGQKYPMSGFNELAYEVTSLVGKLPLGLRVMGSHFRGMSEQDWREALPR LRTHLDRNGEIAGILKFSYDALNDEDKRLFLHIACFFSGEPIDMVERCLEKCFQDVRQGLRVLSEKSLIYSKSGLIMMST LLFQLGRQIVQKESISEPGKRQFLNDAIDIGEVLSDDKAGNSNVIGIDLEWNKDITWTSERAFERLSNLQFIRILGKGVN PLKFLVNLFVRNSNLEKLWEENKPLKNIKWMDLALSRRLKELPNLSTAINLYYLDLSYCSSLVKLPSSIGNATNLEKLSL NYCSSLVKLPSSIGNAINLKTLSLKGCSSMVKLPSSIWNIVNLEELNLENCSNLVELPSLLRSEIEKCTKSDCSRGSGKI INRLPIIAGLLPNPQFEKNNTIKYSESSTNIEELDPWIGRILRLRRLVLSGMRKLVSLPQLPDSLLELDAENCESLERLH CSFPNQDIRLNFANCFKLNQEARDLIIQMPTNKYAVFPTEKVPICFSYRSSGSSLTVKLNRLPVGKSTKFKACILCAYDD ENNFGLWETASVFCTITFGGNASIACNKRVERVLPGNLCTFEVEVETEEVPFEDFESSDIELVREDDGNKRLPLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |