Names & Information
Knowledge of BnaC03G0679000GG:
| Gene Name | BnaC03G0679000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g61680D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2052 nt ATGGCTTCTTCTTCTTCTACTTTAACTCTTTTGGCTCCTCCCTCTTCTTTGCCTCACAACTGGAAACACCATGTCTTCCC AAGCTTCCATGGGGCAGATGTCCGCACAAACTTTCTCAGCCACGTTCTCAAGGAGCTCAAGAGCAAAGCAATCGACCTAT TCATTGACAACGATATAGAGAGGAGTAAGTCGATTGGTCCTGAGCTCATAGAAGCTATTAAAGGATCTAGGATTGCTATT GTCTTTCTCTCGAAGAACTATGCTTCATCGACATGGTGCTTGAACGAGTTGGTGGAGATCATGACGTGCAGAGAAGCGTT TGGTCAAACAGTGATTTCTCTATTCTATGAAGTAGATCCAACTCATGTAAAGAAGCAGACTGGTGATTTTGGGAAGGTCT TCAAAAAAACTTGTGTAGGGAAAACGAAGGAGGAGATCCAAAGATGGAAACATGCTTTGACGGAAGTGGCTCAAATCGCA GGTTTCCATTCATCAAACTGGGAAACTGAAGCAAAGATGATTGAAGTTATTGCCATTGATGTTTCTAACAAGTTGAACAA TTTCGCACCATCAGGTGATTTCAACGGATTAATTGGAATGGAATCTCACATAACAGAAATGGAACCGTTGTTACAGCTAG ATTCGAATGAGGTGAGAAAAATAGGGATCTTGGGTCCACTTGGAATTGGTAAGACAACCATTGCTAGATATCTGTTCAAC CAACACTCCCAAGATTTCCAACTGAGCGTCTTTATGGATAATATCAGAAGAAACTACCCGGCAGCAGCAGCTTGTTCCGA TGGCTATAGTGTGATGTTGGATTTACAAAAGCAGTTTATGTCTCAACTAACCAATGAGGCATGTATTAAGGTTCCACATT TGGGAGTTGTCAAAGACAGGTTGAAAGACAAGAAAGTTCTTGTTGTCCTTGATGATGTGGACCAGTTAATACAACTGGAA GCCATGGCAAAAGAAACTTGTTGGTTTGGTCCTGGGAGTCGGATTATCATCACAACCCAGAATCAAAAGATTTTAAAAGC AAGTGGGATCAACCATATATACAAACTTGCTTGTGAAGTTAGGAGTCTTGTAGGTAGACTTCCATTGGGGCTAAGGGTTA TAGGATCATATTTTCGGGGAATGTCCGAGCAAGATTGGATAGAGGCACTACAAAGTGAGCCTGGAAATCCTCAATTTTTG AATGATGCCATCGATGTTGGTGAAGTGCTCATTGATGATAAAGCCGGTCGTAGCAGTGTCATTGGAAGAGATCTTGACGA GAAGATAACATGTGCAAGTGAAAGAGTCTTTATTAGATTGTCTAATCTTCAATTCTTAAGAACTAAAAGAGATGGCGTTA ATCTGCAAAGTATGAATTACATATCCCGAAAACTAAGAGTACTAAGTTGGCCAATGTTCCACAGGACATGTTTTCCTTCA AGTTTTAATCCAACGTTTCAAGCCAAGCTAGATATGCCATTTAGCAAGCTTGAGAAATTGTGGGGAGAAACTAAACCGCT CAATCTCAAGTGGATGGAGTTGAGTTATTCCAATTGTTTGAAAGAGCTTCCTGATTTCTCAACTGCCATTAATCTATATG AACTGGATCTCACACACAGCTCAAGTCTGGTGAAACTCTCTTCCTCTATTGGAAATGCAATTAATCTCCAAAATTTGAAT CTCAGTCATTGCTCAGATCTGGTGGAGATCCCTTCATCTATTATCACTAATCTCAAATCTCTTGATTTCTATGGATACTC AAGTTTGGTGGAGGTTCCCTTCAATATCGAAGAAGTCATTGATTCTATTTACATTAATCTCAGTTATTGCTCAAGTATGG TGGAAGTCCCTTCCTCTACTGAAAATGCAATTAATCTCCAGGAACTGAATCTCAATGATTGCTCAAACCTGGTGGAATTC CCTTTCTCTATTGGGAATGCATTTTATCTCCAAAAACTGAATATGAGTTATTGTGCAAGTCTGGTGGCAACACAGCTAAT TTCGAAGAACATGATCTCGATCATTGTCGGGTTGAACTCCCTTCATCTATGA |
| AA seq | Len:684 aa MASSSSTLTLLAPPSSLPHNWKHHVFPSFHGADVRTNFLSHVLKELKSKAIDLFIDNDIERSKSIGPELIEAIKGSRIAI VFLSKNYASSTWCLNELVEIMTCREAFGQTVISLFYEVDPTHVKKQTGDFGKVFKKTCVGKTKEEIQRWKHALTEVAQIA GFHSSNWETEAKMIEVIAIDVSNKLNNFAPSGDFNGLIGMESHITEMEPLLQLDSNEVRKIGILGPLGIGKTTIARYLFN QHSQDFQLSVFMDNIRRNYPAAAACSDGYSVMLDLQKQFMSQLTNEACIKVPHLGVVKDRLKDKKVLVVLDDVDQLIQLE AMAKETCWFGPGSRIIITTQNQKILKASGINHIYKLACEVRSLVGRLPLGLRVIGSYFRGMSEQDWIEALQSEPGNPQFL NDAIDVGEVLIDDKAGRSSVIGRDLDEKITCASERVFIRLSNLQFLRTKRDGVNLQSMNYISRKLRVLSWPMFHRTCFPS SFNPTFQAKLDMPFSKLEKLWGETKPLNLKWMELSYSNCLKELPDFSTAINLYELDLTHSSSLVKLSSSIGNAINLQNLN LSHCSDLVEIPSSIITNLKSLDFYGYSSLVEVPFNIEEVIDSIYINLSYCSSMVEVPSSTENAINLQELNLNDCSNLVEF PFSIGNAFYLQKLNMSYCASLVATQLISKNMISIIVGLNSLHL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |