Names & Information
Knowledge of BnaC03G0684600GG:
| Gene Name | BnaC03G0684600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g62010D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3555 nt ATGATTGCACTCTTCTCTCATCGTTTATTGCTGCTCTGTAAAAATTCGCTTGACCAATCGACCATGGCGGCCTCCTCCTC TTCCTCCGGGCAATCCCCGCCGCACAACCAAGTCTTCATCAATTTTCGAGGGGAATTGCGGACGAATTTCGTCAGCCATC TGGTGGAGGCCTTAGAAACAGATGGAATCAATGTCTTCATCGACGAAAAAGCTCCTAGAGGTGAAGATATCGCCACCCTC TTTGGCAGAATCGAGGAGTCAAAGATCGCGCTTGCTATCTTCTCAATTGAGTATGCGAAGTCAAAGTGGTGCTTGGACGA GCTGGAGAAGATCAAGGAGTTCGTTGACTCCGGAAAACTTGTGGTCATTCCGATCTTCTACAAGGTAGACACAAACGATG TGAAAGATCTGAACGGAGTGTTCGGTAACAAGTTTTGGGAATTGGCTAGGACTTGCAAAGGTGAAAAGTTCGACAAGTGG AGAGACGCTTTAGGAGTCGTTTCAAGAAAGTTCGGCTTCACTTTAACTGAAACGAGCAAAGAAAGTGAATCTATCATTCA GATTGTAAAGGCAGTGACCAAAGAGCTAACTCTCAATTCGACAACACGGGAAAGAGTAATCCCCATTGACAATCCTGGTG CAGGAGATGAAGAAACGGCTGAATCTGCTTCAGACTCGGCTCTTCCTTCCTTCGGCATAGAAACACGTCTAAATCAGTTG GAAGAGATGTTAAACTCTTACGCAGACCGTACTCTTAAGCTTGGTCTTGTCGGGATGCCGGGTATTGGTAAGACCACCTT GACAAAGATCCTGTATGAAAAGCGTGAAGGCAAGTTTGTGCGCCACGCTTTTCTTGTAGATGTGCGTGAGTTGAGTAAAA GCGGCAGGATGAATGGGAGATATCTCGCGAAGGAGTTGTTGAGGAAGGAATATGTGGATGAAGTCGTCGATTCCATGCAA GCTGAGTCCTTGAAAATACACCTACTCCGTAATAAGTCTCTTGTTATTCTTGATGACGTGACTAACAAGAAACAGATAGA AGTTCTTCTTGGCAATGGCGACTGGATTAAGGAAGGTAGCTTAATCATTATCACGACGAGTGATAGGTCAGTGATCGAAG GGGAGGTTGATGAAATATATGAGGTTCTTAGATTAAGTGGCAGAGACAGTTTGCAGTGCTTCAGCCATTATGCCTTTGGT GTCGTCAATCCTGTGGGAAATTTCAGGAATCTTTCCAAAGAATTTTCGGAGTATGCCAAAGGAAACCCATTCGCTCTCAA GATATTGGGTGGAGAGCTTAATGGAAAAAACGAGGCTCACTGGAAAGAGGCACTTCGCAAGCTGTCACAAAGTTCCAATG AGACGATACAAGATTTCTTGCAGATAAGCTATAATGAGGTAAGTCCGCATCAAAAAGATGTGTTTCTTGATGTTGCGTGC TTCTTTAGATCAGGGGATGAGTATTACGTGAGGTGTTTAGTGGAGTCTGATCTAAAGGATCTTGCCAGTAAGTTTTTGAT TAACATTTCTGGTGGACGAGTGGAGATGCACGATTTGCTGTATACATTTGGCAAGGAACTTGCTTCCCAAGGATCGCGTA GGCTGTTCAACCATAAAGGCCTTCATGCTCTGAAGAAAACAGCGGGAGACGACATGGTGAGAGGTATTGTGAGAGGTATT TTTATTGACATGTCTGAAATGGAGAAGGAACTTTCTTTGGACAAATGTACCTTCAACAACATGCGTAATCTTAGGTATCT GAAGTTGTATAGTTCTCACTGTCATCGACAATGCAAAGCTGACTGCAAACTAAACTTCCCTGATGAGCTTGAGCTTCCAT TAGATGAGATACGGTATCTCTACTGGCTGAAATTTCCTTTCAAGAACCTTCCCAAAGACTTCGACCCCAAGAATCTTACC GACCTTAACCTGCCTTACAGCACGATTGAAGAGGTCTTGGATGGTGTTAAGGAAACACCAAAGCTTAAGTGGGTTGATCT TAGCTACTCAAGCAAGTTAAGAAATCTTTCAGGGTTGCTAAATGCTGAAAGTCTCCAGAGATTGAATCTTGAAGGCTGCA CGAGTTTGGAACAGTTGCCGAAGGGCATGAAACGCATGCAAAGTCTTGTTTTCCTCAACATGAGAGGTTGCACGAGTCTC CGGATTCTCCCAAATATCAATCTGATCTCTATGAAAACTCTCATCCTCACCAACTGCAAAAGCCTTCAGAACTTCCGGGT GATTTCGAATAATCTAGAGAATTTACACTTAGATGGAACAGCCATTAGTCAACTTCCTACAACCATGTGGAAGCTCCAAA CATTGATTGTATTGAACTTGAAAGACTGCGAAGATTTGGTGGCAGTTCCAGAAAGCCTGGGGAAGCTGAAAGCTCTGCAA GAACTGGTGCTATCTGGTTGTTCAAAGCTCAAGACTTTTCCAGTTCCTGTTGAAAACATGAAATGCTTGCAGATATTGTT GCTCGACGGGACATCAATTACAGACATGCCAAAGATATCGCAGTTGAATTGGTCACAAGTGGAAGACTTACGTGAACTAA GACGTGGTGTGAACGGCGTATCCTCATTGCAGCGTCTATGCTTAAGCAGGAATGATATGATCACCAACTTGCAAGATGAC ATCAGTCTACTATGTCATCTGAAACTGCTTGACCTGAAGTACTGCAAGAATCTCGCTTCAATTCCACTGCTTCCACCAAA TCTAGAGATCTTAGATGCACATGGCTGCAACAAACTGAAGACAGTTGCAACACCATTGGCCATTCTTAAGCATATGGAGA AGGTTCACTCTAACTTCATTTTCACCAACTGCAACATTCTTGAACAAGCTGCAAAGAATATCATCACAACGTATGCTCAA AAGAAAAGCCAGCTAGATGCGCTTAGATGTTATAAAGAGGGACATGCTTCAGAAGCTTTGTTCATTACTTCCTTTCCAGG GAGTGAAGTACCTTCATGGTTTGACCATCGCATGATTGGATCAACGTTAAAGCTGAAGTTTCCACCACATTGGTGTGACA ACAGACTTTCAACAATAGTGCTATGCGCTGTTGTTGCATTCCCTCACATTCAAGATGAAACCAACAGTTTTTCAATTGAA TGCACTTGTGAGTTCACCAACGAACTTGGAACATGTACACGTTTCAGCTGCATTCTTGGTGGAGGCTGGATTGAACCGCG CAAGATTGATTCAGACCATGTGTTTATCGGTTACACCAGTTGCTCCCACATAACAAATCATGTAGAAGGTTCGCCAGAAC ATCAAAAATGTGTTCCTACCGAGGCGTCAATAAAATTCAAAGTGATAGATGGAGCAGGTGAGATTGTGAATTGTGGTTTA AGTTTGGTGTACGAGGAACCAAACCATGTTGTTATCGAAGGAGATTGTAGTGGAACTTCCTCGGGAAGAGGTTTATCAGT TGTAGAGAGTACAATGAGCTTTGCTACTCGGTTCCTCTCTGTTATTTTGAGGTATTTGTGGCTAGGTGTTGTGTTCTTTT CGGTTTTTGGGTTTGCTAGATTTTATTTTCACTAG |
| AA seq | Len:1185 aa MIALFSHRLLLLCKNSLDQSTMAASSSSSGQSPPHNQVFINFRGELRTNFVSHLVEALETDGINVFIDEKAPRGEDIATL FGRIEESKIALAIFSIEYAKSKWCLDELEKIKEFVDSGKLVVIPIFYKVDTNDVKDLNGVFGNKFWELARTCKGEKFDKW RDALGVVSRKFGFTLTETSKESESIIQIVKAVTKELTLNSTTRERVIPIDNPGAGDEETAESASDSALPSFGIETRLNQL EEMLNSYADRTLKLGLVGMPGIGKTTLTKILYEKREGKFVRHAFLVDVRELSKSGRMNGRYLAKELLRKEYVDEVVDSMQ AESLKIHLLRNKSLVILDDVTNKKQIEVLLGNGDWIKEGSLIIITTSDRSVIEGEVDEIYEVLRLSGRDSLQCFSHYAFG VVNPVGNFRNLSKEFSEYAKGNPFALKILGGELNGKNEAHWKEALRKLSQSSNETIQDFLQISYNEVSPHQKDVFLDVAC FFRSGDEYYVRCLVESDLKDLASKFLINISGGRVEMHDLLYTFGKELASQGSRRLFNHKGLHALKKTAGDDMVRGIVRGI FIDMSEMEKELSLDKCTFNNMRNLRYLKLYSSHCHRQCKADCKLNFPDELELPLDEIRYLYWLKFPFKNLPKDFDPKNLT DLNLPYSTIEEVLDGVKETPKLKWVDLSYSSKLRNLSGLLNAESLQRLNLEGCTSLEQLPKGMKRMQSLVFLNMRGCTSL RILPNINLISMKTLILTNCKSLQNFRVISNNLENLHLDGTAISQLPTTMWKLQTLIVLNLKDCEDLVAVPESLGKLKALQ ELVLSGCSKLKTFPVPVENMKCLQILLLDGTSITDMPKISQLNWSQVEDLRELRRGVNGVSSLQRLCLSRNDMITNLQDD ISLLCHLKLLDLKYCKNLASIPLLPPNLEILDAHGCNKLKTVATPLAILKHMEKVHSNFIFTNCNILEQAAKNIITTYAQ KKSQLDALRCYKEGHASEALFITSFPGSEVPSWFDHRMIGSTLKLKFPPHWCDNRLSTIVLCAVVAFPHIQDETNSFSIE CTCEFTNELGTCTRFSCILGGGWIEPRKIDSDHVFIGYTSCSHITNHVEGSPEHQKCVPTEASIKFKVIDGAGEIVNCGL SLVYEEPNHVVIEGDCSGTSSGRGLSVVESTMSFATRFLSVILRYLWLGVVFFSVFGFARFYFH* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine rich repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |