Names & Information
Knowledge of BnaC03G0684800GG:
| Gene Name | BnaC03G0684800GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g62030D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:2823 nt ATGTCTTCTAATGGATTACCACACACCGTGTACATCTACTGCGCAGATACATTACAGTACTCTTTTGCCAGCCACCTCTC CTTGGCTTTCCACCGGAAAGGCATTTATGCATCAGTAAATTGCAATGAGACTCTGGATAAGATAGAGGAAGCAAGCGGTT TTGTGGTGGTTTTATCCAAGAATTACCTGTCCTCCCCCTCGTGCCTGGACAAGCTCGTGAAGGCTCTTCAGTGCCGAAGG AAACACGTCCAGCTGGTGGTTCCAGTGTTCTATGGTCTTAGTCCGTCGGATGTGGCGGTGCAGGAGCAAGAGTCAGATGA TCGGATAAGAGATTGGATTAGCGCGCTCCAAGAGCTGAGAGACTTACCAGGCATACTCTCTAGGGAGGAATCTAGTGATT GCGAACTTGTGAAAGAGATTGTCAAAGACGTGTATGAAAAACTCTTTCCCACGCAGCAAATTGGAGTTAACTCGAGGCTG CTGGAGATAAAACAGTTGCTTTGCAAGCAACCATGGGGTATCCGTCACATAGGAATTTGGGGTATGCCTGGCATTGGCAA GACGACTCTTGCTAAAGCCTTTTTTGACCAACTCTCTGGAAGATATGAAGCTTCTTGTTTCATCACACACTTTGACAAAG CTTTCCATGAGAAGGGACTGTACCGTCTGTGGGATGAACATTTTGGGAAAATTCTGAAAGACATTCCTGGTGTATGCAGC AGCATTACAAGACCAAGCCTCCCCGGGGAAAAAATAAACAAGAAGAGAACTCTTATTGTTCTTGATGACGTGCAAAATCC TTTAGTAGCCGAGTCTTTCCTTAGAGGGTTTCATTGGTTTGGCCCAGGAAGCCTAATCATCGTAACTTCCAGAGATAAAA GAGTTTTCCGCCTTTGTCAAATTAGTCAGGTGTATGAGGTTAAGAGATTAAATAAGAATGAGGCTCTGCAGCTGTACTCT CAGTGTGCATTTGGAAAAGATATAGAAGAACAAAAACTCATGGAGCTACCAATGGAAGTGATTGACTATGCTAATGGAAA TCCATTAGCCCTCAGTTTTTACGGCGAAGAGCTTAAGGGAAAGAATCTGTTAGAACCAAATATGATTCATGATTTACTCA AGAGCAGCTACGAAACACTTAGTGACGATGAGAAGGACATTTTTCTGGACATTGCTTGTTTCTTCCAGGGAGATGAAGTT GACTATGTGAAGCAACTGCTTGAGGGATGTGGTCTGTTTCCACATGTTGGGATTGATGTTCTTGTGGAGAAGTGTCTGGT GACCATTTCAGAAAACAGAGTTGAAATGCATGGAATAATCAAAGATTATGGCAGAGAAATAAACAACAAAGAAACAACAT GGATCAAGAGGGGTCGCAGGCTGTGGGGAGCTTCTACCATCGAATTTCTACTTCAAGATGAAAATCTTGAAGCAAAAGGA CATCCCGAAGCAACCTGTAAAGGGGCTCTGGTCACTGAAGACATCAAAGCCATATCTCTGGATACAACAAATTTTCGCTT TGATTTGAATCCCACTGCTTTTGAAAATATGCTTAACCTTAGGTTCCTGAAGATTTATAGTTGCAATGATAAAAGCATTT CCGGAGTCCACCTTCCAAAGGGACTCGAGTCTCTGCCTAACGAGCTAAGACTCCTCCACTGGGAGAACTATCCTTTGCAA TCCTTGCCACAAGACTTTGACCCAGGCCACCTTGTTGAACTCAATATGCCTTACAGTCAGCTTCAGACACTTTGGAGAGG AACCAAGAAACTTGATATGCTGAAGATCGCTAGGCTTTCTCATTCCCAGCAGCTGACTGAAATTGACGATATTTGTAAAG CTCAAAATATCGAGCTAATAGATCTCCAAGGCTGTGAAAAATTGCAGAGTTTTCCAGCCACAGATCAGTTACAACATCTC CGAGTTGTAAACCTCTCAGGTTGCAGTGAGATCAGAAGTTTCCCAGAATTGTCGCCAAATATTGAGGACATTAATCTCCA GGGAACTGCCATAAGAGAGTTACAAATATCCATTGGAGATGCCACCAATCTCAAGAAATTATATCTTAGTGGATGTTCAA GTCTGGTGCAGCTCCCCTCCTCTATTGGAAATGCATCTAATCTCCAAATATTGGATCTAAGTTTTTGTTCAAGTTTGCTC CCCTCGTCACTTGGAATTGCCGCTAATCTAAAGAAATTATATCTTAGTGGATGTTCAAGTCTGATGCAGCTCCCCTCCTC TATTGGGAATGCACCTAATCTCCAAATATTGGATCTCAGCAATTGCTCAAGTCTGATAGAGCTTCCTTCTTCTATAGGAG ATGCCACTAAACTCAAGAAATTGTGTCTTCGTGGATCCTCGGGTCTTGTGCAGCTCCCGTCTTCCATTGGGAATGCCATT AATCTTCAAGAATTAGATCTTGAATATTGCTCAAGCTTGGTTGAGATCCCCTCATCATTTGAAAATGCCACTCATCTCAA GAAGTTATATCTTACTGGATGCTCAAGTTTGTCACCCGTGGAAGAGGAGAGTGTTTATGGTGCGTCGGCTAGTCACTCGT GGACCTCAGATTCCTCACGATTAGGCGAGAAAGGTAAGCAATGTTTCGATGAGATTGAAGAAGAAAACGAAGAGGAAGAG GGGAGCTCAAGTCAAGAAGCAAACGAACCAGTGAGCTTGGAGGAAGAAGAGAGATTACGACAGGAATTGGAGGAGATAGA AGCTAAGTATCGGGAAGAAATGAAAGAGATTGAGAGGAAAAGAGAAGAAGCCTTAATGGAGACAAAGAAAAAGTTGTCTT TAGTAAAAAAGACAAAAAGCTGA |
| AA seq | Len:941 aa MSSNGLPHTVYIYCADTLQYSFASHLSLAFHRKGIYASVNCNETLDKIEEASGFVVVLSKNYLSSPSCLDKLVKALQCRR KHVQLVVPVFYGLSPSDVAVQEQESDDRIRDWISALQELRDLPGILSREESSDCELVKEIVKDVYEKLFPTQQIGVNSRL LEIKQLLCKQPWGIRHIGIWGMPGIGKTTLAKAFFDQLSGRYEASCFITHFDKAFHEKGLYRLWDEHFGKILKDIPGVCS SITRPSLPGEKINKKRTLIVLDDVQNPLVAESFLRGFHWFGPGSLIIVTSRDKRVFRLCQISQVYEVKRLNKNEALQLYS QCAFGKDIEEQKLMELPMEVIDYANGNPLALSFYGEELKGKNLLEPNMIHDLLKSSYETLSDDEKDIFLDIACFFQGDEV DYVKQLLEGCGLFPHVGIDVLVEKCLVTISENRVEMHGIIKDYGREINNKETTWIKRGRRLWGASTIEFLLQDENLEAKG HPEATCKGALVTEDIKAISLDTTNFRFDLNPTAFENMLNLRFLKIYSCNDKSISGVHLPKGLESLPNELRLLHWENYPLQ SLPQDFDPGHLVELNMPYSQLQTLWRGTKKLDMLKIARLSHSQQLTEIDDICKAQNIELIDLQGCEKLQSFPATDQLQHL RVVNLSGCSEIRSFPELSPNIEDINLQGTAIRELQISIGDATNLKKLYLSGCSSLVQLPSSIGNASNLQILDLSFCSSLL PSSLGIAANLKKLYLSGCSSLMQLPSSIGNAPNLQILDLSNCSSLIELPSSIGDATKLKKLCLRGSSGLVQLPSSIGNAI NLQELDLEYCSSLVEIPSSFENATHLKKLYLTGCSSLSPVEEESVYGASASHSWTSDSSRLGEKGKQCFDEIEEENEEEE GSSSQEANEPVSLEEEERLRQELEEIEAKYREEMKEIERKREEALMETKKKLSLVKKTKS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |