Names & Information
Knowledge of BnaC03G0695200QU:
| Gene Name | BnaC03G0695200QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g12220D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1722 nt ATGATTGAGGAAATAGCCACAGATGTTTCAAACAAGCTGATTAGTTCTGTTCCATCAAGTGATTTTAACAGCTTAGTTGG GATGAGAGCTCACATGGAAAATATGGATCTGCTCTTACGCTTGGATTCCAATGAGGTGAGGATGATAGGGATTTGGGGTC CGTCTGGAATTGGTAAGAGCACCATCGCCAGATCTCTATTTAGCCAACACTCTCCTGACTTTCAACTTAGCGTCTTCATG GAGAATATCAAAAGAGAGTATCCAAGACCTTGCGCACAACTGCAATTACAAAATAAGTTCTTGTCTCTAATACTCAATCA GAAGGATGTCACTATCCATCATTTAGGAGTTGCACAAGACCGACTAAAAGATAAGAAAGTGTTAGTTGTTCTCGACGACG TGGACCAATCTGCGCAACTAGATGCCTTGGCGAAAGAACTTTGGTGGTTTGGTCCGGGAAGTCGGGTTATCGTCACAACG CAAGATAAGAGAATTTTAAAAGCCCATCCGATTAACCTTATTTACGAGGTTGGTTTTCCACATGATGATGAAGCTCTTGA AATCTTCTGCATAAATGCTTTTGGTCAAAAATCCCCATATGATGGTTTTGGGGACCTTGCTCTGGAAGTTACAAAGCTTG TTGGTAAACTCCCATTGGGTCTAAGTGTTGTGGGATCTTATTTCAAGGGATTGTCAAAAGAGGAGTGGGAACATGAGTTA CCAAGGGAAATTGTTCGTAAACAAGCCCCTTACGAGCCTGGGCAACGTCAGTTTTTGGTTGATGATGAAGATATATGCAA AGTACTAAGTGATGGTACACTAGGTAGTCGAAGTGTTATAGGCATAACTATTGAGTTGGGAAAGGAGTTGAAGGTAAGTG ACAGAGCCTTTGAAAGAATGTCCAATGTTCAATTCTTAAATCGTTCTTGTGATTTTAGTTACCACGGTCCATACGTACTA GACCACAGTCCATACGTACTAGAAAGTCTGATCTGCCTACCTCGAGAACTTAAATTACTGGATTGGACCAAATTTCCAAT GACATGTCTGCCTTCTAGTTTTAATCCGGAGTTCCTGGTGGGAATAAACATGAGTTTTAGCAAGCTTGAGAAATTGTGGG AAGGAAATAAAACGATTAGAAATCTCAAGTGGTTGAAATTGACTGAAGCGAAAAATCTGAAGGAGCTTCCTGATCTTTCA ACTGCCATTAATCTTCGACGATGCTCAAGCCTTGTGGAGCTTCCTTCTTCTATTGGAAATATGACTCATTTTGAACAGTT GAACCTCAACAAATGTTCAAGCCTTGTGGAGCTCCCCTCTTCTATTGGGAATCTGACTAATCTCCAGGACTTGTATCTCA ACGGATGCTCAAGTCTAGAGAAGCTCCCCTCTTCTATTGGGAATCTTCATTGTTTGCAAAGATTGCAAATGAAAGGTTGC TCAAAGCTAAAGGCCCTTCCGATCATCACCAACTTGGAATCTCTTTTGGAGCTAGATCTCAGTAACTGCTCGTCGTTGAA AAGCTTTCCTGAGATTTGCACAAACATTGTAGATCTAAAGATTAATGGAACTGCTATAGAAGAAATTCCTCCATCATTCA GGACGAGGATAAAAGAATGCAGACTAAGTACTTCAGAAAGCGATTGGGAAAGCGAAGAATACGGTTCAGAAGAAAGTGAC GAATGCGGTTCTCCAGAAAGCGATGCTCCCTCCTCGTGTTAA |
| AA seq | Len:574 aa MIEEIATDVSNKLISSVPSSDFNSLVGMRAHMENMDLLLRLDSNEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSVFM ENIKREYPRPCAQLQLQNKFLSLILNQKDVTIHHLGVAQDRLKDKKVLVVLDDVDQSAQLDALAKELWWFGPGSRVIVTT QDKRILKAHPINLIYEVGFPHDDEALEIFCINAFGQKSPYDGFGDLALEVTKLVGKLPLGLSVVGSYFKGLSKEEWEHEL PREIVRKQAPYEPGQRQFLVDDEDICKVLSDGTLGSRSVIGITIELGKELKVSDRAFERMSNVQFLNRSCDFSYHGPYVL DHSPYVLESLICLPRELKLLDWTKFPMTCLPSSFNPEFLVGINMSFSKLEKLWEGNKTIRNLKWLKLTEAKNLKELPDLS TAINLRRCSSLVELPSSIGNMTHFEQLNLNKCSSLVELPSSIGNLTNLQDLYLNGCSSLEKLPSSIGNLHCLQRLQMKGC SKLKALPIITNLESLLELDLSNCSSLKSFPEICTNIVDLKINGTAIEEIPPSFRTRIKECRLSTSESDWESEEYGSEESD ECGSPESDAPSSC* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |