Names & Information
Knowledge of BnaC03G0695400ZS:
| Gene Name | BnaC03G0695400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 52 [Brassica rapa] |
| Best Hit (SwissProt) | U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5 PE=3 SV=3 |
| NT seq | Len:5052 nt ATGGATTTCCACAGAAAGGGCATTTATGCATCTGCAAATAGCAATTGCAGGAGGAAAAGCGGCCAGCTGGTGGTTCCAGT GTTCTATGACATCAGTCCATCTAATGTGGAGGTGCAAGAGCTGAGAGAATTCACAGGCTACCAGTTTAGGGATGCAGTGA GTGCGAACTCGTGGAAGATATTGTTAAAAGATGTCTATGAAAAACTCCTTCCCGCGGAACAAATAGGAATCAGCTTAAGG ATCCTAGAGATAGAACACTTGCTTTGCAAACAACCATGGGGTATCCGTCGCTTAGGAATCTGGGGTATGCCCGGCATAGG CAAGACAACACTTGCTAAAGCAGTTTTTGATCAGATCTCTGGAGGCTATGAAGCTTTTTTTTTCATCAAACACTTTGACA AAGCTTTCAATGAGAAGGGACTTCACTGTTTGTTGGAGGAACATTTTGGGAACATTTTGATGGAATTGCCTCGCGTATGC AGTAGCATTACAAGACCTAGCTTCCCCGGGGATATATTAAGCAAGAAGAGAACTCTTGTTGTTCTTGATGATGTGCAAAA TCCTTTAGTTGCCGAGTCTTTTCTCGGTGGGTTTCATTGGTTTGGTCCGGGAAGCCTAATTATCATAACCTCCAGAGATA AACAAGTTTTCCGCCATTGTCAAATCAATCACGTGTATGAGGTTCAGAGCTTAAATGAGAATGAGGCTCTGCAGCTATTC TCTCACCATGCTATTGGAGAAAATTTAAGGGAGAAAAAATTCATGAAACTATCAATGGAAGTGATTGACTATGCTAGTGG AAATCCATTAGCTCTCAGCTATTACGGAAAAGAGCTCAAGGGAAAGAAACTGTCAGAAATGAGGACCACATTCCTCAAAC TCAAGCTACGTACGCCATATAAGATTCAAGACTTATTCAAGAGAAGCTATGAAGCACTTAATGACAGCGAGAAGAACATT TTTCTGGACATTGCTTGTTTTTTCAAGGGAGAAAATGTTGACCATGTCATGCAACTGCTTGAGGGGTGTGGATTTCTACC AGATATTGGGATTTTGATGTTCTTGTGGAGAAGTGGCACTGTAGACATAGAAGGCATATTTCTAGACGCATCGAACTTAA GCTTTGATGTGAAGTCTGGTGCTTTTAAGCATATGCTAAGCCTTAGATTCCTGAAGATTTATTGTTCCAGTTATGAAAAA GATAGTAGAGTCCTCCTTCCCAGAGGACTTGATTCTCTGCCTTATGAGCTAAGACTCCTCCACTGGGAGAAATATCCTTT GAAATCCTTGCCACAAAACTTTGACCCATGCCACCTTGTTGAACTAAATTTGTCTTACAGTCAGCTTCAGAAACTTTGGG GAGGAACCAAGAATCTCAAGATGCTGAAGGTGGTCAGGCTTTGTCATTCCCAGCAGCTAACTGATATTAACGATCTTTGT AAAGCTCAAGATCTCGATCTATTAGATCTCCGAGGGTGTACACAATTGCAGAGTTGCGGAAGCTTCCCAGAGGTTTCACC AAATATTAAGGAACTACATCTACAGGGGACTGATATTTTAAACCATGAGCAACTAACAAGCCTGATCAAACCCGTGTCAG CTAATCAACATCTTGGTAAACTTGTTGGCCTGAATATGAAAGATTGTGTTCATTTGACAAGTCTGCCTGACATGGCTGAT TTAGAATTACTTCAAGTTCTTGATCTGTCTGGATGCTCAAATCTCAACGATATTCAGGGTTTCCCACGAAACCTGGAAGA ATTATATCTTGCTGGGACGGCCATAAAAGAATTTCCACAGCTTCCCTTGAGTCTTGAAATCTTGAATGCACATGGTTGTG TGTCTCTTATATCAATTCCTATCGGTTTCGAGCAGCTTCCTAGGTACTACACATTCAGTAATTGTTTTGGTCTTTCGGAA AAAGTGGTCAACATTTTTGTAAAGAATGCTTTGACTAATGTTGAGCGCCTCGCAAGGGAGTATCATCAAAAACAGAAACT CGACAAATCTCTAGCTTTCAGCTTCATTGGGCCTTCACCTGCAGGGGAAAATCTAACATTTGATATGCAATCAGGATCTT CTGTGATTATACAAATGGGTTCTTCTTGGAGAGATACGCTTGGAATTGCCGTATTAGTACAAGTTACATTTTCGAAGGAT TACTGCGAGGCTAGTGGTGGTTTTAACGTTACTTGTGTTTGCAGATGGAAAGATAAGAATTATGTCTCTCATAAGCGAGA AAAAGACTTCCATTGTTGGCCTCCAGAGAAAGAAGAAGGTGTTTCAAAGGATCACACGTTCGTCTTCTGTGATCTCGATA TTCATCCTAGTGCCTGTGAAGAAAATGATACCGGCATATTAGCTGATCTTGTCGTATTTGAGTTCTTTACTGTGAACAAG CAGAAGAAGCTATTAGATGAGAGTTTTACAGTGACGAAATGTGGAGTATATGTGATAACTGCTGCAGATCGAGATACAAG CCCTAACATGACTCCATCATTTTCATCGTCTGATTACCTGCAGGAGCTTTCTGATAATGATGCTCGAAACGTATATGATG GCTTAGACGAGAATGAAAGAACTTTATTTCTTTACATTGCGTGTCTGTTCAATGATGAGGAAGCTGATTTGTTGGCACCA CTTAGCAATGGCTTGGAAATTAGTTCTGGGATCAAGATCTTAACCGATAAGTCTCTCATACATATATCTCCATACGGTGT TTTAGTACGAGAAGGCTTACTGCAGAAAATAGGTATGGAGATGATCAATAGACGGAGACAGGCGCAAGCCTTGACCAATT TAGCTGATATAGCCGGAGTGGATTCTCGGAAGTGGGATAATAAAGCTAACATGATAGAGAACTTGCCTCACTCCTTCAAG ATGCACTCTTCCATGTGCTTAGCCTTGAAGAAATTAGTTGATAGAGTCATGAAAATATTTCCTGAAATAGAAGCTGGAGC TGCTAGACCCGGATCTTCCACAGCGATACAGACTCTCAACAAAGCTTTGGAGAAAGCTAAGCTACTTCTTCAATACTGCA GTGAATCCAGTAAACTCTACATGGCAGTAACAGGAGATGCTATACTCTCAAGAGGTTCTAGATCCAAAAAGTTATTAGAA CAAAGCTTAGCTGACATCAGAACCATGGTTCCTACTGCTTTGGCTATCCAGATACTTGAGGTTCTCCCGGATCTTAAGTC AACAGAGTTGTCTCTAGAATCATCTGAAGAAGACGCTGGGAAAGATATTAGGGAACTGATAAAACGAAGCACATCTTCTT CTGTGTCTTCTGATGAGATCAGAGATTTCCACTTTGCAGCCCTAAAGCTCCAGCTTTCAACACCTGAAACCATTGTGATT GAGAGAAGATCCCTGAAGTCGCTTTTTGCTAAATCAGGCGAGTGTAAAGAGAACAAGAGACAGATTCTGAAGTATCTCCT CTACCTCCTGAAGAAGCATGAGAAAATCATTTGGAGTGATCACAAAGAGAGCTCTCTCAGACAGCACCCCTCTGTGAATG ATTCTGTGTCTGCTAGTGTTGCAGAAGCCGGGTGTTCTGAGGAACACAACAATGAGGAACACAACAATGATGAACAGTTT AAGTGTCCTCTCTCTCTTACTGTCATGTATGATCCTGTCATCATCTCCTCAGGCCACACCTTTGAGAGGATGTCGATTCA GAGATGGTTTGATTTAGGTAATGACACGTGTCCTGTATCAAAAAGAGTACTAGATGATTTCACATTGCAGTCCAACGTAG CGATGAAGGATCAGATATCAAAATGGTGCAAGAAGCACGGTCTTGATGTTCAAGATCCAGCTATGAACGCTTCACACAAT CTTGACTTCTCCATTGCTAGTTTTACAAGTTCTCTGTACAATATACCAGACCTCAGCTGCTTCACTAGTAGAGACTTCAG CTCTAGCTTCTCCACCGATTCACCATCTTACTCTAGGATGTCCACGGGTGGCTACTTCATGCCAATGCAGACGATAGATT CTGAGTCAGGAACTGAAGTCACAGATTCTACTCATCACAGTGAGGTGGAGATAGAGCCTTTATGTGAGCTCAGTAAGCTT CCATGGGATGCTCAAATCAAGGTTGTTCAAGATGTAAGAAGTCTTTTTGAGAAAGATTCTAGGGCTGTTCGGTCTGTGTC ACCTAGTAGGTTTCTTGAGCCGCTTATCACATTCTTGAAGAACGCTCATGAGAGAAATGGCACTGAGGGAGACGTAGTAA AGTGTGGTTTGGATTTGTTATTGACTTTCCTCAGTGGAAACAGGAAGGCTATAGAGAGCTTGAAAGAAGACTTGTTTGAA ATGTTGTGCGTCTTTCTTGGGTCAGAGTTAGTAGCTGAAGAAGCTCTAAACGTACTTGAGGTTCTCTCTAATCATCCACA GAGTCTCTCAAAGATAACTTCAACAAGCTCTCTCTCTTCCCTTTTGAAGATAGCTGAGTCTGGAGCAGAAAATCTTCAAG AACAAGCAATGATCACACTCAAGAACCTCTCTGCAAGCAATGAGATTTGTGTGGAAATGGTCTCTCTCGATTTCGTCCAG AAGCTAACATCTTTCTTGCAACAAAAAGTCTTCAGCAAACACTCGATCATCATTCTGAATTATCTCTGCAACACGGAGAA AGGTCGGGTTTGTATAACTGAAACCCCGGGTTGTTTAACTTCAATAGCGGAATTACTCGACTCAAATGTTCCTGAGGAGG TAGAGAATGCAATCTCCATCCTCCTCCAGCTCTGTGTGGAGAAGATAGAGTATTGCTATCTTGTGGTGAGAGAAGGCCTT AATATCTACTCATCTCTTCTCTTGATATCCAACAACGGAACCGAGGAAGCGAAAGTGGGTGCATCTGAATTGCTTAGAGC TCTTGCAGAAGTAGAAGAAGAAGAATCCTCCACTCCAGGAGGAGCAACTACTTCACTGGTTGTTACTCCAGTTACGCAAC AGGAACCTATAACAACACCATGTCCAAAGAATTCTGGTCTTTTTGGACTCAGTTTCCCCATTTCCAAGAAGAAGAAGAAG ATAAAACTATAA |
| AA seq | Len:1684 aa MDFHRKGIYASANSNCRRKSGQLVVPVFYDISPSNVEVQELREFTGYQFRDAVSANSWKILLKDVYEKLLPAEQIGISLR ILEIEHLLCKQPWGIRRLGIWGMPGIGKTTLAKAVFDQISGGYEAFFFIKHFDKAFNEKGLHCLLEEHFGNILMELPRVC SSITRPSFPGDILSKKRTLVVLDDVQNPLVAESFLGGFHWFGPGSLIIITSRDKQVFRHCQINHVYEVQSLNENEALQLF SHHAIGENLREKKFMKLSMEVIDYASGNPLALSYYGKELKGKKLSEMRTTFLKLKLRTPYKIQDLFKRSYEALNDSEKNI FLDIACFFKGENVDHVMQLLEGCGFLPDIGILMFLWRSGTVDIEGIFLDASNLSFDVKSGAFKHMLSLRFLKIYCSSYEK DSRVLLPRGLDSLPYELRLLHWEKYPLKSLPQNFDPCHLVELNLSYSQLQKLWGGTKNLKMLKVVRLCHSQQLTDINDLC KAQDLDLLDLRGCTQLQSCGSFPEVSPNIKELHLQGTDILNHEQLTSLIKPVSANQHLGKLVGLNMKDCVHLTSLPDMAD LELLQVLDLSGCSNLNDIQGFPRNLEELYLAGTAIKEFPQLPLSLEILNAHGCVSLISIPIGFEQLPRYYTFSNCFGLSE KVVNIFVKNALTNVERLAREYHQKQKLDKSLAFSFIGPSPAGENLTFDMQSGSSVIIQMGSSWRDTLGIAVLVQVTFSKD YCEASGGFNVTCVCRWKDKNYVSHKREKDFHCWPPEKEEGVSKDHTFVFCDLDIHPSACEENDTGILADLVVFEFFTVNK QKKLLDESFTVTKCGVYVITAADRDTSPNMTPSFSSSDYLQELSDNDARNVYDGLDENERTLFLYIACLFNDEEADLLAP LSNGLEISSGIKILTDKSLIHISPYGVLVREGLLQKIGMEMINRRRQAQALTNLADIAGVDSRKWDNKANMIENLPHSFK MHSSMCLALKKLVDRVMKIFPEIEAGAARPGSSTAIQTLNKALEKAKLLLQYCSESSKLYMAVTGDAILSRGSRSKKLLE QSLADIRTMVPTALAIQILEVLPDLKSTELSLESSEEDAGKDIRELIKRSTSSSVSSDEIRDFHFAALKLQLSTPETIVI ERRSLKSLFAKSGECKENKRQILKYLLYLLKKHEKIIWSDHKESSLRQHPSVNDSVSASVAEAGCSEEHNNEEHNNDEQF KCPLSLTVMYDPVIISSGHTFERMSIQRWFDLGNDTCPVSKRVLDDFTLQSNVAMKDQISKWCKKHGLDVQDPAMNASHN LDFSIASFTSSLYNIPDLSCFTSRDFSSSFSTDSPSYSRMSTGGYFMPMQTIDSESGTEVTDSTHHSEVEIEPLCELSKL PWDAQIKVVQDVRSLFEKDSRAVRSVSPSRFLEPLITFLKNAHERNGTEGDVVKCGLDLLLTFLSGNRKAIESLKEDLFE MLCVFLGSELVAEEALNVLEVLSNHPQSLSKITSTSSLSSLLKIAESGAENLQEQAMITLKNLSASNEICVEMVSLDFVQ KLTSFLQQKVFSKHSIIILNYLCNTEKGRVCITETPGCLTSIAELLDSNVPEEVENAISILLQLCVEKIEYCYLVVREGL NIYSSLLLISNNGTEEAKVGASELLRALAEVEEEESSTPGGATTSLVVTPVTQQEPITTPCPKNSGLFGLSFPISKKKKK IKL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000151 |
| Pfam | Leucine Rich Repeat |
| KEGG | RRS1; disease resistance protein RRS1; K16225 probable WRKY transcription factor 52 (A) |