Names & Information
Knowledge of BnaC03G0699400GG:
| Gene Name | BnaC03G0699400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g63290D [Brassica napus] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:3600 nt ATGGCTCATCCATCTTCTTCCTCGTCTTTGGGTCCAACTAAGCGCCAGTTTGACGTGTTTGTGAGTTTCAGAGGCAAGGA TACTCGTAATACCTTCACCTCTTACCTTCTTCAGTCCCTGCACCGGAAAGGTATAGATGCTTTCTTTGATGGGAAACTCC GGCGAGGCAAGGACATATCAGTTCTCTTTGACAGGATTGAGCAATCAAAGATGTCCATCATTGTCTTCTCAGAGAACTAT GCTAACTCCACCTGGTGCTTGGAGGAACTCTGGAAGATAATGCAATGCAGAGAGAGGTCCGGTCATGTGGTTTTACCAAT CTTCTACAAGGTCAGGAAATCTGATGTGGAGAATCAGACAGGGAGTTTTCGAACTCCCTTCCAGAACCCAAAAGCGAGTT TCAAGGGACGTGAGCACAAAGTTGCGGCATGGAAGGAAGCTCTAAAGACTGCTTCCAATATCCTGGGCCATGTACTTCCT GAGGAACGACCAGAGTGTGAATTTGTTGAAAAAATAGCCACGGAAACTTTCAAGATGCTGAATGATTTGTCTCCATGTGA GATCAGTGGCTTCCCAGGGATTGAATTTCGTTCAAAAGAACTGGAGGAGTTATTGATGTTCGATAATGCAAACTGTACCC GTACCATTGGGGTCCTTGGCATGACTGGAATCGGCAAGACAACTGTTGCTGCTAGCGTTTACAAACGAAACTACCGTCGG TTTGATGGCTACTGTTTCGTTGAAGACATTGAGAATGAGTCGATAAGGCGTGGATTGCCTCATTTGCGTCAGAAGCTCCT AAGTAAATTATTGGACGAAGAAAATGTGGACGTCAGAGCGCATGGGAGATTGAAAGAGTTCCTCAGGAACAAGAAGGTGC TTATTGTGCTGGATAATGTGACCGAAGAGAATCAAATCGAAGTTCTCATCGGACAGCGGGAACTGTATCGGAAAGGAAGC AGGATTGTTATAACAACAAGAGACAAGAAACTGCTTGAGAACAATGCTGATGCAACGTACGTAGTTCCCAGATTAAATGA CAGGGAAGCTATGGAGCTTTTCTGCCTTGAGGCATTTTCTGAAAACCTCCACTCCACGGAAGAATTTATGGATCTAGCAG AGAACTTTGTGTATTACGCTAAAGGACATCCGTTAGCTTTGAAGTTGTTAGGTTCAGGTCTACGCCACAAGGAAAAAACA TACTGGATGCAGAAATGGGAGAGGTTAAGGGTAGTGCCAGACAAGGAGATTCAGAAAGTGCTAAAAGTGAGTTATGACAC ATTAGATGATGAACAGAAGAGCATGTTTCTGGACATAGCATGCTTTTTCAGGTCGGAGAAAGCAGATTTCATTTCGAGCA TCCTGAAGTCAGATCGTGTCGATGCTGCAGCTGTGATGAGGGATCTTGAAGACAAGTGTTTCTTAACTGTTTCTTATAAT CGGCTTGAGATGCATGATCTACTGCATACAATGGGGAAGGAAATTGGATATGAATCATCTGTCAAAAGGGAAGGAAAACG TACTAGGTTGTGGAACCCCAAAGATATTCGCCATGTGCTGGAGCAGAGCACGGGAACTGGTTGTGTTAGAGGCATTTTCT TGAACATGTCTAATGTCGAAAGGATCAAGCTAAGTCCTGATGTTTTCATGAAGATGTCGAATCTCAAATTCCTGAAATTC CACTATTCTCATTGTTCCCAGTGGTGTGATAACAAGCATAAAATTCAGTTCTCTGAAGACCTTGATCATTTTCCGGACGA GCTTGTGTATCTTCACTGGCAGGGGTACCCTTACGAGTACCTGCCATCAGAATTTAATCCAGAGGAACTCGTTGATCTCA GTCTGCGTCATAGCTACATCAAACAACTGTGGGAAGATGAGAAGGTGCCACAGAATACAGAAAAATTAAGATGGGTTGAC CTCAGTCAGTCACAAGGCTTGCTGAATCTATCAGGTTTGTCCAGGGCCAAAAATCTTGAAAGATTGGATCTCGAAGGCTG TAAGAGTTTGGTTATGTTGGGCTCATCAATCGAACAGATGAACAAACTAATTTACCTGAACCTCAGGGAGTGCACTAGCC TTGAGAGTCTTCCGGAGGGAATCAATTTGAAGTCTCTAAAGACTCTGATCCTCAGTGGCTGCTCAAACCTTCAGGAGTTT CAAATCATATCAGAAAATATTGAGTCCCTTTACTTAGACGGCTCAACCATACAACGAGTTGCTGAACGCATTGAGAGTCT TCGCAACCTTATTTTGCTGAATCTCAAGAATTGTTGCAGGTTGAAGTGTCTTCCCAACGATCTTTACAAGCTGAAATCTC TTCAGGAACTGATTCTCTCTGGCTGCTCAGCTCTGGAGAGTCTTCCACCCATCAAAGAGGAGATGGGATGCTTAGAGATT TTGCTTATGGATGGAACTTCCATCAAACAGACACCTGAAACGATTTTTTTGAGTAACCTGAAGGTGTTTTCGTTCTGTGG ATCTAGCATCGAAGATTCCACAGAGTTGGCGTTGTTGCCTTTCTCAGGCAACTCTTGTCTTTCGGACCTCTATCTGACGA ATTGCAATATCTACAAATTGCCGGACAACTTTAGTTCCTTGCACTCGTTGAGGTCTCTATGCTTAAGCAGAAACAACATT GAGACTCTACCTGAGAGCATCGAGAAACTTCATTGTCTGTTGTTTCTTGACTTGAAACATTGCCGCAGGCTCAATTCTCT CCCGGTGCTTCCACCTAATATACAGTATGTAGATGCTCATGGGTGTGTTTCTCTGGAAAAAGTTGCAAAACCAGTGACAG TTCCCCTAGTAACTGAGAGGATGCATACTACTTTCATTTTTACGGATTGCTTCAAACTGAACAGAGCTGAACAAGAAGCT ATTGTAGCTCAGGCCCAACTCAAGAGTCAGCTACTGGCAAGGACATCTCTTCAACATAATCATAAGGGACTAGTTCTGGA TCCTCTGGTTGCCGTTTGCTTCCCAGGAAGTGACATACCCTCATGGTTCTGCCATCAGAGTATGGGATCTTCGATTGAAA CCAACCTCCTTCCTCACTGGTGCAACAATAAATTTATTGGAGCTTCCCTAGGTGTTGTTGTCACCTTCAAGGATCACGAA GGTCGTCATGCAAACCGTTTATCTGTAAGGTGCAAGTGCAGATTTCAAAATCGAAACGGTCAGTCAATCAGCTTTAGTTT CTGTCTTGGGGCAGGGAACGAGTCATGTGGATCATCTTGCCATGAACCACGGAAACTTGGATCTGACCATGTGTTTATTA GCTTTAACAACTGTAATGTGCCAGTCTTCCAATGGAATGAAGAGATTAATGACGGTAATAGATGTCGTCCCACTAGTGCC TCATTTGAATTCTACCTTACTGATGGCACTGAAAGGAAGCTAGAAAGGTGCAAGGTGACAAGGTGTGGGATGAGTTTGCT ATATGCTCCAGATGAGAATGACCGTGGGTTTCAGGGAACTCGGGTTACAGATACTGTTGAGCGTACATCGAGTGAAGCTT TTGTACCCATAAGAGGTCGGTCACACTCGCAAGTTGGAGAAAGAAGGAATGGTAGAATGAGAGATGAAATCCCCTTATGA |
| AA seq | Len:1200 aa MAHPSSSSSLGPTKRQFDVFVSFRGKDTRNTFTSYLLQSLHRKGIDAFFDGKLRRGKDISVLFDRIEQSKMSIIVFSENY ANSTWCLEELWKIMQCRERSGHVVLPIFYKVRKSDVENQTGSFRTPFQNPKASFKGREHKVAAWKEALKTASNILGHVLP EERPECEFVEKIATETFKMLNDLSPCEISGFPGIEFRSKELEELLMFDNANCTRTIGVLGMTGIGKTTVAASVYKRNYRR FDGYCFVEDIENESIRRGLPHLRQKLLSKLLDEENVDVRAHGRLKEFLRNKKVLIVLDNVTEENQIEVLIGQRELYRKGS RIVITTRDKKLLENNADATYVVPRLNDREAMELFCLEAFSENLHSTEEFMDLAENFVYYAKGHPLALKLLGSGLRHKEKT YWMQKWERLRVVPDKEIQKVLKVSYDTLDDEQKSMFLDIACFFRSEKADFISSILKSDRVDAAAVMRDLEDKCFLTVSYN RLEMHDLLHTMGKEIGYESSVKREGKRTRLWNPKDIRHVLEQSTGTGCVRGIFLNMSNVERIKLSPDVFMKMSNLKFLKF HYSHCSQWCDNKHKIQFSEDLDHFPDELVYLHWQGYPYEYLPSEFNPEELVDLSLRHSYIKQLWEDEKVPQNTEKLRWVD LSQSQGLLNLSGLSRAKNLERLDLEGCKSLVMLGSSIEQMNKLIYLNLRECTSLESLPEGINLKSLKTLILSGCSNLQEF QIISENIESLYLDGSTIQRVAERIESLRNLILLNLKNCCRLKCLPNDLYKLKSLQELILSGCSALESLPPIKEEMGCLEI LLMDGTSIKQTPETIFLSNLKVFSFCGSSIEDSTELALLPFSGNSCLSDLYLTNCNIYKLPDNFSSLHSLRSLCLSRNNI ETLPESIEKLHCLLFLDLKHCRRLNSLPVLPPNIQYVDAHGCVSLEKVAKPVTVPLVTERMHTTFIFTDCFKLNRAEQEA IVAQAQLKSQLLARTSLQHNHKGLVLDPLVAVCFPGSDIPSWFCHQSMGSSIETNLLPHWCNNKFIGASLGVVVTFKDHE GRHANRLSVRCKCRFQNRNGQSISFSFCLGAGNESCGSSCHEPRKLGSDHVFISFNNCNVPVFQWNEEINDGNRCRPTSA SFEFYLTDGTERKLERCKVTRCGMSLLYAPDENDRGFQGTRVTDTVERTSSEAFVPIRGRSHSQVGERRNGRMRDEIPL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |