Names & Information
Knowledge of BnaC03G0711800ZS:
| Gene Name | BnaC03G0711800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g63230D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3756 nt ATGCGTTTAATGTATTTTAAATCGAATATAAACACAATCACTCTCTTGAATTATTTTCCAGCTAGCAATACAAAAAGCCT TATGGTCACTCGTCAGTCAACTCTTGATCAGTTCAACCAAGCCATACAAATCAGATCCTACCCGCCCGAAGTTCATCTCA TGGCTGCTAAATCTTCCTCCAAATTCGACGTGTTTCTCAGTTTCCGAGGCAAAGACACGCGTAATACCTTCGTATGCTAT CTCAAAGATTTTCTTAAACGGAAAGGGATCGACGCGTTCATCGATGAGGAACTCCGACGTGGCGCCAACATCTCACTGCT TCTCGAAAGGATTGAACAGTCAAAGATCTCGATCGTCATTTTCTCGGAGAATTACGCGGATTCCAGGTGGTGCTTAGAGG AACTGGAGAAGATCATGGACTGCAAGAAGACCTTCGATCAGGTAGTTTTACCAGTCTTCTACAAAGTTCGGGCCTCGGAC GTGAGTTGTCAGACTGGGAAATTCGGAGCTCCGTTCGACAAACCCGAAGAGAGTTTCCGGAAGTATGAACATCGAATCCC GGCATGGAGAAAAGCCCTGAGTGATGCATCTGAAATCTCCGGCTATGTTCTTGAAGAGGACAGAACTGAGCTCGAGTTTG TTGACAATATTGCCAAAGAGACGTCCAGGTTGCTAAACAAGTTATCTCCATCCGAATTTCCTGGTCCAGGGATTGAATCG CGTACCATGGAACTGGAAAATTTAATGTGTTTTGAAGAGACGAGATGTGTTCGTATCGTTGGGGTTCTTGGGATGGCTGG GATTGGAAAGACAACTGTTTCAAATTGTGTGTATGAGCGAAACTTGGATGGTTTCGATGGTTGCTGTTTTCTTTCAAATG TTCAAGACGAGTTAAAACTACAAACAATAGATCAGTTGCAGCAGAAACTCCTGCGTAAGCTATTAGATGACGAAAAGCTT GAAGTTGGAGCTTCTGTAGGAACACACAAAGTCTTAAAGGATCGTCTTCGGAACAAGAAGCTGTTTATTGTGCTCGACAA CGTGACCAATGAAAAACAAATAAGCCTTCTACTTGGGGAAGCGGGAAAAGAACTGTACCGACAAGGAACTCGGATCATTA TAACAACAAGGGACAAGAAACTGCTAGACAAGGTTGTGGATGGGACATATGTGGTTCCGAGATTGAACGGAAGAGAAGCT CTGGAGCTTTTCTGCTCGAAAGCATTTTCTACTAATCCCGACAACATGGCAGAGTACATGGATCTATCAAACAAGTTTGT GGATTATTCTATAGGGCTTCCACTAGCTCTGTGCTTGTTAGGTTCTGATCTTCGTAGGAAAGATATCCAATATTGGACGA AGAAACTGGAGGGACTAGAGAATCAGCTAGACAAGAATATCCAAAAAGAACTGAACACTAGTTATGAGGAACTATCCGAT GAAGAGAAGAGCATATTTCTTGATGTGGCGTGTTTCTTTTATTCGGAGAAGTTTGATTCTGTTTCGAGGATTCTGAGCAC TTACCGTGATGATGAGTCTAATGTGATAAATGATCTTGTTGATAAGTGTTTGGTGACCATTTCTGATAATCGGCTTGAGA TGCATGACCTACTGCTGAAAATGGGAAAGGTTATTGGTTATGAATCATCCATCAATGAGGTGGGTAAGCGTGGTCGGTTA CGGAACCCAAAAGATATTTGCCGCATCTTAAAAAATAAAAACAAGGGCACCAAGAAAACTAGAGGCATCTTCTTAGATAT GTCTAATGTTAAAAGAATGGAGCTACCTTCTGATATTTTCACGAAGATGTTGAATCTCAAGTTCCTCAAATTCTACAATT GTTCCGAATGGTGTGAGAAGGATTGCAGATTACAACTTCCTGGTGGGCTTGATTACTTTCCAGATGAGCTGGTGTATCTC CACTGGCAAGGGTACCCTCTGGATTATCTTCCAATGAACTTCGACCCGGAAAAGCTGGTTGTTCTTAATCTGCGTTATAG CAACATTGAGCAGTTGTGGAAAGAAGAGAAGGACACAGGAGAGTTGAGGTGGGTCGATCTCAGTTATTCAAAAGAGTTGC TGAATCTATCTGGCTTGTCGAAAGCTAAAAAACTCGAGAGGCTGGATCTTGAATGCTGTGAAAGTTTAGCCGAGTGTTCA TCGATCCAGGAGATGGAAAGTCTTGTTACACTGAATCTCAGAGATTGTCTAGAGCTCAAGAGTCTTCCAGAGGAAACCAA TCTGAAGTCTCTGAAGACTCTTATCCTCAGTGGTTGTTCAAAACTCATTAACTTTCCAACTATATCAGAAAACATAGAAT CTCTATATTTGGATGGCACAGCGGTAGAAAGAGTTCCTGAATCCATAGGTTATCTCCGAAACCTTGCTGTGCTAAATCTG AAGAAGTGTTGCAGCTTGATGAGTCTTCCTGACAATTTTTGCAAGCTGAAATCTCTGAAAAAACTGATTCTCTCTGGTTG TTCAAGGCTAGAGAGTTTTCCGGACATCAATGAAGACATGGGTAGCTTAGAGATTCTGCTCATGGATGAGACTGCCGTCA ATCAAATTCCCAGAAAAATGCATATGAGCAATCTCAAGCTGTTCTCATTTGGTGGATCTAAAGTCCAGGATCTCACATGT TTGGAATTGCTTCCTTTCTCTGGCTGCTCTGGGTTATCAGAAATGTATCTCACAGATTGTAATCTGTACAATTTGCCAGA AAACTTTAGCTGCTGCTTATCCTTCCTGCAGTCTTTATGCTTGAGCAGAAACAATATCAAGAATCTACCTGGAAGCATCA AGAAACTTCATCATCTAAAGTCCCTTTACTTGAAGCATTGTGAAAAGCTCATTTCTCTCCCAGTGCTTCCATCAAATCTG CAGTACATGGATGCTCATGGCTGTACCTCACTTGAAACAGTAGCAAAACCCATGACGCTTATTGTAGTAGCTGAGAGGAC CCATTCTACTTTCGTCTTCACTGATTGTTTCAAGCTAAACCAAGATGCACAAGAAAATATTATGGCTCATACTCAACTCA AGAGTCAAATACTGGTGAATGCATCTCTTCAACGTAATCATAAGGGATTAGTTTTGGCACCTCTGTCTAGTGTAACTTTT CCCGGAAACGATTTGCCATTATGGTTCCGCCATCAGAGAATGGGATCTTCCATGGAAATTGACCTGCCTCCACACTGGTG TGACAATAAATTCATTGGACTTTCTCTCTGCGTAGTTGTCTCGTTCAAGAACTATGAAGACAAAACCAGCCGTTTCTCAG TGATATGCAAGTGCGAGTTCAAACTAAATGATGATGATTGCATCAGCTTTACTTGCAGACTTGGGGGACGGAAAGAGCAA TTTGGATCATCTAGCCTCAAGGAAGAACCAAGAAGACTCGACTCTGATCATGTCTTCATCAGCCAAAACAGCTGCTTCCA TGCCAAGAAAGAGCATGGTCTCAACCGATGTTGCAACACGACCGCCTCATTCAAATTCTATGTTGTTGATGGTGTAGATT GCTGTGAAGTGGTGAAATGTGGGATGAGCTTGTTGTATGCCCCGGATGAGAATGATTATATGTTTCAGGAATTACAGGAG AGTAACCTCGAGAAAGCGGTATCATCTGGAAAAGAAACAGATCTAAATGCAACCGCTATAGATCATGAAGCTGCTATGTC CAAGAGAGGCCGTAATTATCTACAAGAAGAAGAGCAACTGAACGGGAAAAGATTACGTTTTTCCAACAAAGTCTAA |
| AA seq | Len:1252 aa MRLMYFKSNINTITLLNYFPASNTKSLMVTRQSTLDQFNQAIQIRSYPPEVHLMAAKSSSKFDVFLSFRGKDTRNTFVCY LKDFLKRKGIDAFIDEELRRGANISLLLERIEQSKISIVIFSENYADSRWCLEELEKIMDCKKTFDQVVLPVFYKVRASD VSCQTGKFGAPFDKPEESFRKYEHRIPAWRKALSDASEISGYVLEEDRTELEFVDNIAKETSRLLNKLSPSEFPGPGIES RTMELENLMCFEETRCVRIVGVLGMAGIGKTTVSNCVYERNLDGFDGCCFLSNVQDELKLQTIDQLQQKLLRKLLDDEKL EVGASVGTHKVLKDRLRNKKLFIVLDNVTNEKQISLLLGEAGKELYRQGTRIIITTRDKKLLDKVVDGTYVVPRLNGREA LELFCSKAFSTNPDNMAEYMDLSNKFVDYSIGLPLALCLLGSDLRRKDIQYWTKKLEGLENQLDKNIQKELNTSYEELSD EEKSIFLDVACFFYSEKFDSVSRILSTYRDDESNVINDLVDKCLVTISDNRLEMHDLLLKMGKVIGYESSINEVGKRGRL RNPKDICRILKNKNKGTKKTRGIFLDMSNVKRMELPSDIFTKMLNLKFLKFYNCSEWCEKDCRLQLPGGLDYFPDELVYL HWQGYPLDYLPMNFDPEKLVVLNLRYSNIEQLWKEEKDTGELRWVDLSYSKELLNLSGLSKAKKLERLDLECCESLAECS SIQEMESLVTLNLRDCLELKSLPEETNLKSLKTLILSGCSKLINFPTISENIESLYLDGTAVERVPESIGYLRNLAVLNL KKCCSLMSLPDNFCKLKSLKKLILSGCSRLESFPDINEDMGSLEILLMDETAVNQIPRKMHMSNLKLFSFGGSKVQDLTC LELLPFSGCSGLSEMYLTDCNLYNLPENFSCCLSFLQSLCLSRNNIKNLPGSIKKLHHLKSLYLKHCEKLISLPVLPSNL QYMDAHGCTSLETVAKPMTLIVVAERTHSTFVFTDCFKLNQDAQENIMAHTQLKSQILVNASLQRNHKGLVLAPLSSVTF PGNDLPLWFRHQRMGSSMEIDLPPHWCDNKFIGLSLCVVVSFKNYEDKTSRFSVICKCEFKLNDDDCISFTCRLGGRKEQ FGSSSLKEEPRRLDSDHVFISQNSCFHAKKEHGLNRCCNTTASFKFYVVDGVDCCEVVKCGMSLLYAPDENDYMFQELQE SNLEKAVSSGKETDLNATAIDHEAAMSKRGRNYLQEEEQLNGKRLRFSNKV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |