Names & Information
Knowledge of BnaC03G0712600ZS:
| Gene Name | BnaC03G0712600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g63290D [Brassica napus] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:3576 nt ATGGCTCATCCATCTTCTTCCTCGTCTTTGGGTCCAACTAAGCGCCAGTTTGACGTGTTTGTGAGTTTCAGAGGCAAGGA TACTCGTAATACCTTCACCTCTTACCTTCTTCAGTCCCTGCACCGGAAAGGTATCGATGCTTTCTTTGATGGGAAACTCC GGCGAGGCAAGGACATATCAGTTCTCTTTGACAGGATTGAGCAATCAAAGATGTCCATCATTGTCTTCTCAGAGAACTAT GCTAACTCCACCTGGTGCTTGGAGGAACTCTGGAAGATAATGCAATGCAGAGAAAGGTCCGGTCATGTGGTTTTACCAGT CTTCTACAAGGTCAGGAAATCTGATGTGGAGAATCAGACAGGGAGTTTTCGAACTCCCTTCCAGAACCCAAAAGCGAGTT TCAAGGGACGTGAGCACAAAGTTGCGGCATGGAAGGAAGCTCTAAAGACTGCTTCCAATATCCTGGGCCATGTACTTCCT GAGGAACGACCAGAGTGTGAATTTGTTGAAAAAATAGCCACGGAAACTTTCAAGATGCTGAATGATTTGTCTCCATGTGA AATCAGTGGCTTCCCAGGGATTGAATCTCGTTCAAAAGAACTGGAGGAGTTATTGATGTTCGATAATGCAAACTGTACCT GTACCATTGGGGTCCTTGGCATGACTGGAATCGGCAAGACAACTGTTGCTGCTAGCGTTTACAAACGAAACTACCGTCGG TTTGATGGCTACTGTTTCGTTGAAGACATTGAGAATGAGTCGATAAGGCGTGGATTGCCTCATTTGCGTCAGAAGCTCCT AAGTAAATTATTGGACGAAGAAAATGTGGACGTCAGAGCGCATGGGAGATTGAAAGAGTTCCTCAGGAACAAGAAGGTGC TTATTGTGCTGGATAATGTGACCGAAGAGAATCAAATCGAAGTTCTCATCGGACAGCGGGAACTGTATCGGAAAGGAAGC AGGATTGTTATAACAACCAGAGACAAGAAACTGCTTGAGAACAATGCTGATGCAACGTACGTAGTTCCCAGATTAAATGA CAGGGAAGCTATGGAGCTTTTCTGCCTTGAGGCATTTTCTGAAAACCTCCACTCCACGGAAGAGTTTATGGATCTGTCAG CGAAATTTGTTTATTACGCTAAAGGACATCCGTTAGCTTTGAAGTTGTTAGGTTCAGGTCTACGTCACAAGGAAAAAACA TACTGGATGCAGAAATGGGAGAGGTTAAGGGTAGTGCCAGACAAGGAGATTCAGAAAGTGCTAAAAGTGAGTTATGACAC ATTAGATGATGAACAGAAGAGCATGTTTCTGGACATAGCATGCTTTTTCAGGTCGGAGAAAGCAGATTTCATTTCGAGCA TCCTGAAGTCAGATCGTGTCGATGCTGCAGCTGTGATGAGGGATCTTGAAGACAAGTGTTTCTTAACTGTTTCTTATAAT CGGCTTGAGATGCATGATCTACTGCATACAATGGGGAAGGAAATTGGATATGAATCATCTGTCAAAAGGGAAGGAAAACG TACTAGGTTGTGGAACCCCAAAGATATTCGCCATGTGCTGGAGCAGAGCACGGGAACTGGTTGTGTTAGAGGCATTTTCT TGAACATGTCTAATGTCGAAAGGATCAAGCTAAGTCCTGATGTTTTCATGAAGATGTCGAATCTCAAATTCCTGAAATTC CACTATTCTCATTGTTCCCAGTGGTGTGATAACAAGCATAAATTTCAGTTCTCTAAAGACCTTGATCATTTTCCGGACGA GCTTGTGTATCTTCACTGGCAGGGGTACCCTTACGAGTACCTGCCATCAGAATTTAATCCAGAGGAACTCGTTGATCTCA GTCTGCGTCATAGCTACATCAAACAACTGTGGGAAGATGAGAAGGTGCCACAGAATACAGAAAAATTAAGATGGGTTGAC CTCAGTCTGTCACAAGGCTTGCTGAATCTATCAGGTTTGTCCAGGGCCAAAAATCTTGAAAGATTGGATCTCGAAGGCTG TAAGAGTTTGGTTATGTTGGGCTCATCAATCGAACAGATGAACAAACTAATTTACCTGAACCTCAGGGAGTGCACTAGCC TTGAGAGTCTTCCGGAGGGAATCAATTTGAAGTCTCTAAAGACTCTGATCCTCAGTGGCTGCTCAAACCTTCAGGAGTTT CAAATCATATCAGAAAATATTGAGTCCCTTTACTTAGACGGCTCAACCATACAACGAGTTGCTGAACGCATTGAGAGTCT TCGCAACCTTATTTTGCTGAATCTCAAGAATTGTTGCAGGTTGAAGTGTCTTCCCAACGATCTTTACAAGCTGAAATCTC TTCAGGAACTGATTCTCTCTGGCTGCTCAGCTCTGGAGAGTCTTCCACCCATCAAAGAGGAGATGGGATGCTTAGAGATT TTGCTTATGGATGGAACTTCCATCAAACAGACACCTGAAACGATTTTTTTGAGTAACCTGAAGGTGTTTTCGTTCTGTGG ATCTAGCATCGAAGATTCCACAGAGTTGGCGTTGTTGCCTTTCTCAGGCAACTCTTGTCTTTCGGACCTCTATCTGACGA ATTGCAATATCTACAAATTGCCGGACAACTTTAGTTCCTTACACTCGTTGAGGTCTCTATGCTTAAGCAGAAACAACATT GAGACTCTACCTGAGAGCATCGAGAAACTTCATTGTCTGTTGTTTCTTGACTTGAAACATTGCCGCAGGCTCAATTCTCT CCCGGTGCTTCCACCTAATATACAGTATGTAGATGCTCATGGGTGTGTTTCTCTGGAAAAAGTTGCAAAACCAGTGACAG TTCCCCTAGTAACTGGGAGGATGCATACTACTTTCATTTTCACGGATTGCTTCAAACTGAACAGAGCTGAACAAGAAGCT ATTGTAGCTCAGGCCCATCTCTTCAACATAATCATAAGGTCTGGACTAGTTCTGGATCCTCTGGTTGCCGTTTGCTTCCC AGGAAGTGACATACCCTCATGGTTCTGCCATCAGAGTACGGGGTCTTCGATTGAAACCGACCTCCTTCCTCACTGGTGCA ACAATAAATTTATTGGAGCTTCCCTAGGTGTTGTTGTCACCTTCAAGGATCACGAAGGTCGTCATGCAAACCGTTTATCT GTAAGGTGCAAGTGCAGATTTAAAAATCGAAACGGTCAGTCAATCAGCTTTAGTTTCTGTCTTGGGGGATGGAACGAGTC ATGTGGATCATCTTGCCATGAACCACGGAAACTTGGATCTGAACATGTGTTTATTAGCTATAACAACTGTAATGTGCCAG TCTTCCAATGGAATGAAGAGAGTAATGACGGTAATAGATGTCGTCCCACTAGTGCCTCATTTGAATTCTACCTTACTGAT GGCACTAAAAGGAAGCTAGAAAGGTGCAAGGTGACAAGGTGTGGGATGAGTTTGCTATATGCTCCAGATGAGAATGACCG TGGGTTCCAGGGAACTCGGGTTACAGATACTGTTGAGCGTACATCGAGTGAAGCTTTCGTACCCATAAGAGGTCGGTCAC ACTCGCAAGTTGGAGAAAGAAGGAATGGTAGAATGAGAGATGAAATCCCCTTATGA |
| AA seq | Len:1192 aa MAHPSSSSSLGPTKRQFDVFVSFRGKDTRNTFTSYLLQSLHRKGIDAFFDGKLRRGKDISVLFDRIEQSKMSIIVFSENY ANSTWCLEELWKIMQCRERSGHVVLPVFYKVRKSDVENQTGSFRTPFQNPKASFKGREHKVAAWKEALKTASNILGHVLP EERPECEFVEKIATETFKMLNDLSPCEISGFPGIESRSKELEELLMFDNANCTCTIGVLGMTGIGKTTVAASVYKRNYRR FDGYCFVEDIENESIRRGLPHLRQKLLSKLLDEENVDVRAHGRLKEFLRNKKVLIVLDNVTEENQIEVLIGQRELYRKGS RIVITTRDKKLLENNADATYVVPRLNDREAMELFCLEAFSENLHSTEEFMDLSAKFVYYAKGHPLALKLLGSGLRHKEKT YWMQKWERLRVVPDKEIQKVLKVSYDTLDDEQKSMFLDIACFFRSEKADFISSILKSDRVDAAAVMRDLEDKCFLTVSYN RLEMHDLLHTMGKEIGYESSVKREGKRTRLWNPKDIRHVLEQSTGTGCVRGIFLNMSNVERIKLSPDVFMKMSNLKFLKF HYSHCSQWCDNKHKFQFSKDLDHFPDELVYLHWQGYPYEYLPSEFNPEELVDLSLRHSYIKQLWEDEKVPQNTEKLRWVD LSLSQGLLNLSGLSRAKNLERLDLEGCKSLVMLGSSIEQMNKLIYLNLRECTSLESLPEGINLKSLKTLILSGCSNLQEF QIISENIESLYLDGSTIQRVAERIESLRNLILLNLKNCCRLKCLPNDLYKLKSLQELILSGCSALESLPPIKEEMGCLEI LLMDGTSIKQTPETIFLSNLKVFSFCGSSIEDSTELALLPFSGNSCLSDLYLTNCNIYKLPDNFSSLHSLRSLCLSRNNI ETLPESIEKLHCLLFLDLKHCRRLNSLPVLPPNIQYVDAHGCVSLEKVAKPVTVPLVTGRMHTTFIFTDCFKLNRAEQEA IVAQAHLFNIIIRSGLVLDPLVAVCFPGSDIPSWFCHQSTGSSIETDLLPHWCNNKFIGASLGVVVTFKDHEGRHANRLS VRCKCRFKNRNGQSISFSFCLGGWNESCGSSCHEPRKLGSEHVFISYNNCNVPVFQWNEESNDGNRCRPTSASFEFYLTD GTKRKLERCKVTRCGMSLLYAPDENDRGFQGTRVTDTVERTSSEAFVPIRGRSHSQVGERRNGRMRDEIPL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |