Names & Information
Knowledge of BnaC03G0714700GG:
| Gene Name | BnaC03G0714700GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g64750D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:4611 nt ATGAGATTTCAATCGTTTTTGAAAGAAATTAAGAAACAGAGAAAGATGGTAGAAAAGAGAAAGAAGAGGAAAGGACATGA GCTTTCGAATCCAGCGAGAAAGAAGATCCGAGTGCAGAACCAGAGCCAAATTCAAGTTCCATCATCACCTCCACCTTCTC TGTCTCCTTCTTCACCTCCGTGTCCTTCATCACTTCCATCTTCTTTGTCTCCCTCATCACATCCGTCCTCTTTGTCTCTT TCATCTGCTCCATCTTCTTCGTCTCATAACTGGACACACGATGTTTTTCCAAGCTTCCGCGGGGAAGATGTCCGCATAGG GTTTCTAAGCCACATTCAAAAGGAGTTTAGAAGAAAAGGAATCACACCATTCATCGACAATGAGATCAGGAGAGGAGAAT CCATCGGTCCAGAACTCATAAGGGCCATTAGAGGATCTAAAATCGCCATCATCTTGCTCTCGAGGAACTATGCTTCTTCA AAGTGGTGCCTTGACGAGTTGGTGGAGATTATGAAGTGCAAAGAAGAGTTAGGCCAAACCGTGATCCCTGTTTTCTATAA AGTAGATCCGGCTGATGTAAAGAAGCTCAGAGGATATTTTGGGAAAGTTTTCGAAAAAACTTGCGAGGGTAAAAGTAAGG AGGATACTGAAAAATGGAGACATGCTTTGGAGAAGGTGGCGACAATTGCTGGTTACGATTCAAGCACCTGGGATAATGAA GCGGCCATGATTGAGGAAATAGCCACTGATGTTTCAAACAAGCTGATTAGTTCTGTTCCATCAAGTGATTTCAACAGCTT AGTTGGGATGAGAGCTCACATGGAAAATATGGATCTGCTCTTACGCTTGGATTCCAATGAGGTGAGGATGATAGGGATTT GGGGTCCGTCTGGAATTGGTAAGAGCACCATCGCCAGATCTCTATTTAGCCAACACTCTCCTGACTTTCAACTTAGCGTC TTCATGGAGAATATCAAAAGAGAGTATCCAAGACCTTGTTTTGATAGATACAGCGCACAACTGCAATTACAAAATAAGTT CTTGTCTCTAATACTCAATCAGAATGATGTCACTATCCATCATTTAGGAGTTGCACAAGACCGGCTAAAAAATAAGAAAG TGTTAGCTGTTCTCGATGACGTGGATCACTCAGCGCAACTAGATGCCTTGGCGAAAGAAACTTGCTGGTTTGGCAGTGGA AGTCGGATTATTGTTACAACGCAAGATAAAAGAATTTTGAATGCACATCAGATCAACCATATTTACAAGGTTGATTTTCC TCGTGATGATGAGGCACTTGAAATCTTCTGCATGAACGCTTTTGGTCAAAAATCTCCGTACGATGGTTTTGGGGACCTTG CTTGCAAAGTTACAGACCTTGCTGGTAAACTCCCTTTGTGTTTAAGTGTTATGGGATCTCATTTCAAAGGATTGACCACG AAGGAGTGGGAACAAGAGCTAACAAGGTTAAGAACTAGACTTGACAGTGAAACAGAAAGTATTTTAAAGTTCAGCTATGA TGCCTTATGCGATGAAGATCAAGCTTTGTTTCTTCACATAGCCTGCCTTTTCAACGGTGAACGGATTGACAAAGTAGAAG AGTTTCTTGCAGAGAAATTTGTTGCTGTTAAATGTCGTCTTCGTGTTTTAGCTGAGAAATCTCTCATATCCGTCGACTCA GAAGGATATATAAGGATGCATGATTTGCTAGCACGTTTGGGTAGGGAAATTGTTCGTAAACAATCCCCTAACGAACCTCG GCAGCGTCAGTTTTTGGTTGATGATGGAGATATACGCCAAGTACTACGTGATGATACACTAGGTAGTCGAAGTGTTATAG GAATAAACTTTTTGTTGGAGAAGGAGTTGAAGATAAGCGACCAAGCCTTTGAAAGAATGTCCAATCTCCAATTCTTAAGA CTTGATAGTCATTATGTTGAGCATATTATACTCGTACGAACAAATAGTCAATACATATTAGAAAGTGTGAACTGTCTACC TCGAGAAGTTAGATTACTGCATTGGAGCACATTCCCGATGACATGTCTGCCTTCTAATTTTAATCCGGAGCTCCTAATGG AAATAAAAATGAGTTGTAGCAACCTTGAGAAATTGTGGGAAGGAAATAAAACGATTAAAAATCTCAAGTGGATGGATTTG TCTCATTCCATAAATCTAAAGGAGCTTCCTAATCTTTCAACTGCCACAAATCTCCGAGAACTGGATCTCGAGAATTGCTC AAGTCTTGTGGAGCTTCCTTCTTCTATTGGGAATTTGACTAATCTCAAGAAATTGAATCTCATGCTGTGCTCAAGCCTTA TGGAACTCCCTTCTTCTATTGGTAACATGACTAATCTTGAGAATTTGGATCTCTCTGGATGCTTAAACCTTGTGGGACTC CCTTTTTCAATTGGAAATATGACTAATCTCAAAAAGTTGTTTCTCTCGGTGGCGCTCCCCTATTCTATGACGGCTAAGTA TTTGTACGGATGCTCAAGCCTTGTGGAGCTTCCCTCTTCTATTGGAACTGCTATTGAAGAAATTCCAACATCAATCAGGT CATGGTCTCGTCTTGATACCTTAGACATGTCATACAGTGAAAACCTAAGGAAATCGCATCATGCTTTTGACCTCATCACG AATCTTCACTTGAGCCACACAGGAATTCAAGAAATTTCTCCATTGGTAAAAGAAATGTCTCGTCTACAAACACTTGTAAT CAACGGATGCACAAAGCTGGTTTCGCTCCCACAGCTTCCAGATTCATTAAAATTCATGCATGTAGAAAACTGTGAGTCCC TCGAGAGACTAGATTGCTCTTTTTACAGGACAAAGCTGAGTGATCTTCGCTTTGTTAACTGCCTCAAACTGAATCGAGAA GCAGTAGACCTTATTCTCAAGACATCGATAGAAAGATGGGCGATCTTTCCCGGAGAAACGGTGCCTGCATATTATTTCAG TTACAGAGCCACGGGGAGTTCAGTGTCAATGAAACTGAATGGATTCGATACACATTTTCCTACATCCTTGAGATTCAAAG CTTGCCTCTTGCTGGTTACTAACCCTGACGACGTTGGGCCTGCGGATTGGTACAGCTTCTTCGCTATGACATCTATCATG TTCATTGCTTTGCTTTGTTGGACCAAAATGGATAGGCACCAGCTAAAACAGCAGTTTCAAGTAGCTAGCTGTGCTTATGG TAAAAGTAAGGAGGATACTGAAAAATGGAGACAGGCTTTGGAGAAGGTGGCGACAATTGCTGGTTACGATTCAAGCACCT GGGATAATGAAGCGGCCATGATTGAGGAAATAGCCACAGATGTTTCAAACAAGCTGATTAGTTCTGTTCCATCAAGTGAT TTTAACAGCTTAGTTGGGATGAGAGCTCACATGGAAAATATGGATCTGCTCTTACGCTTGGATTCCAATGAGGTGAGGAT GATAGGGATTTGGGGTCCGTCTGGAATTGGTAAGAGCACCATCGCCAGATCTCTATTTAGCCAACACTCTCCTGACTTTC AACTTAGCGTCTTCATGGAGAATATCAAAAGAGAGTATCCAAGACCTTGCGCACAACTGCAATTACAAAATAAGTTCTTG TCTCTAATACTCAATCAGAAGGATGTCACTATCCATCATTTAGGAGTTGCACAAGACCGACTAAAAGATAAGAAAGTGTT AGTTGTTCTCGACGACGTGGACCAATCTGCGCAACTAGATGCCTTGGCGAAAGAACTTTGGTGGTTTGGTCCGGGAAGTC GGGTTATCGTCACAACGCAAGATAAGAGAATTTTAAAAGCCCATCCGATTAACCTTATTTACGAGGTTGGTTTTCCACAT GATGATGAAGCTCTTGAAATCTTCTGCATAAATGCTTTTGGTCAAAAATCCCCATATGATGGTTTTGGGGACCTTGCTCT GGAAGTTACAAAGCTTGTTGGTAAACTCCCATTGGGTCTAAGTGTTGTGGGATCTTATTTCAAGGGATTGTCAAAAGAGG AGTGGGAACATGAGTTACCAAGGGAAATTGTTCGTAAACAAGCCCCTTACGAGCCTGGGCAACGTCAGTTTTTGGTTGAT GATGAAGATATATGCAAAGTACTAAGTGATGGTACACTAGGTAGTCGAAGTGTTATAGGCATAACTATTGAGTTGGGAAA GGAGTTGAAGGTAAGTGACAGAGCCTTTGAAAGAATGTCCAATGTTCAATTCTTAAATCGTTCTTGTGATTTTAGTTACC ACGGTCCATACGTACTAGACCACAGTCCATACGTACTAGAAAGTCTGATCTGCCTACCTCGAGAACTTAAATTACTGGAT TGGACCAAATTTCCAATGACATGTCTGCCTTCTAGTTTTAATCCGGAGTTCCTGGTGGGAATAAACATGAGTTTTAGCAA GCTTGAGAAATTGTGGGAAGGAAATAAAACGATTAGAAATCTCAAGTGGTTGAAATTGACTGAAGCGAAAAATCTGAAGG AGCTTCCTGATCTTTCAACTGCCATTAATCTTCGACGTTTGGATCTGTGGTGCTGCTCAAGCCTTATGTCTCATAGGATG CTCAAGCCTTGTGGAGCTTCCTTCTTCTATTGGAAATATGACTCATTTTGA |
| AA seq | Len:1537 aa MRFQSFLKEIKKQRKMVEKRKKRKGHELSNPARKKIRVQNQSQIQVPSSPPPSLSPSSPPCPSSLPSSLSPSSHPSSLSL SSAPSSSSHNWTHDVFPSFRGEDVRIGFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIRAIRGSKIAIILLSRNYASS KWCLDELVEIMKCKEELGQTVIPVFYKVDPADVKKLRGYFGKVFEKTCEGKSKEDTEKWRHALEKVATIAGYDSSTWDNE AAMIEEIATDVSNKLISSVPSSDFNSLVGMRAHMENMDLLLRLDSNEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSV FMENIKREYPRPCFDRYSAQLQLQNKFLSLILNQNDVTIHHLGVAQDRLKNKKVLAVLDDVDHSAQLDALAKETCWFGSG SRIIVTTQDKRILNAHQINHIYKVDFPRDDEALEIFCMNAFGQKSPYDGFGDLACKVTDLAGKLPLCLSVMGSHFKGLTT KEWEQELTRLRTRLDSETESILKFSYDALCDEDQALFLHIACLFNGERIDKVEEFLAEKFVAVKCRLRVLAEKSLISVDS EGYIRMHDLLARLGREIVRKQSPNEPRQRQFLVDDGDIRQVLRDDTLGSRSVIGINFLLEKELKISDQAFERMSNLQFLR LDSHYVEHIILVRTNSQYILESVNCLPREVRLLHWSTFPMTCLPSNFNPELLMEIKMSCSNLEKLWEGNKTIKNLKWMDL SHSINLKELPNLSTATNLRELDLENCSSLVELPSSIGNLTNLKKLNLMLCSSLMELPSSIGNMTNLENLDLSGCLNLVGL PFSIGNMTNLKKLFLSVALPYSMTAKYLYGCSSLVELPSSIGTAIEEIPTSIRSWSRLDTLDMSYSENLRKSHHAFDLIT NLHLSHTGIQEISPLVKEMSRLQTLVINGCTKLVSLPQLPDSLKFMHVENCESLERLDCSFYRTKLSDLRFVNCLKLNRE AVDLILKTSIERWAIFPGETVPAYYFSYRATGSSVSMKLNGFDTHFPTSLRFKACLLLVTNPDDVGPADWYSFFAMTSIM FIALLCWTKMDRHQLKQQFQVASCAYGKSKEDTEKWRQALEKVATIAGYDSSTWDNEAAMIEEIATDVSNKLISSVPSSD FNSLVGMRAHMENMDLLLRLDSNEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSVFMENIKREYPRPCAQLQLQNKFL SLILNQKDVTIHHLGVAQDRLKDKKVLVVLDDVDQSAQLDALAKELWWFGPGSRVIVTTQDKRILKAHPINLIYEVGFPH DDEALEIFCINAFGQKSPYDGFGDLALEVTKLVGKLPLGLSVVGSYFKGLSKEEWEHELPREIVRKQAPYEPGQRQFLVD DEDICKVLSDGTLGSRSVIGITIELGKELKVSDRAFERMSNVQFLNRSCDFSYHGPYVLDHSPYVLESLICLPRELKLLD WTKFPMTCLPSSFNPEFLVGINMSFSKLEKLWEGNKTIRNLKWLKLTEAKNLKELPDLSTAINLRRLDLWCCSSLMSHRM LKPCGASFFYWKYDSF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |