Names & Information
Knowledge of BnaC03G0717600ZS:
| Gene Name | BnaC03G0717600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:1458 nt ATGGAAAAGATGAAACCGCTTTTATGTCTAGATTCCAATGAAGCGAGGATGATAGGGATTTGGGGTCCGTCTGGAATTGG TAAAAGCACCATCGCCAGATTTCTATTTAGCCAACACTCCCATGACTTCCAACTTAGTGTCTTCATGGAGAATATCAAAA GATACTATCCAAGACCTTGTTTCGATGAATACAGCGCCCAACTGCAATTACAGAAAGAGTTCTTATCTCAAATAATCAAC CACGAAGGTGTCAGTATTTGTCATTTAGGAGTTGCACAAGACAGGTTAAAAGATAAGAAACTGTTAGTTGTTCTCGATGA CGTGGACCATTCAGCGCAACTAGATGCCTTGGCGAAAGTACCTTCGTGGTTTGGTCCTGGAAGTAGAATTATCGTCACAA CGCAAGATAAGAAAATTTTGAATGCACATGGGATTAACCGTATTTACAAGGTTGATTTCCCACATTTTCGTGAGGCTCTT GAAATTTTCTGCATGAATGCTTTTTGTCAAAATTCCCCATATGATGGCTTTCAAGACCTTGCTTGTGAAGTTACATACGT TGCTGGTAATCTCTCTTTGGGTCTAAGGGTTATGGGATCTTATTTTAAAGGAATGCACAAGGAGTGGGAAGAGGAGCTAC CGAGGTTAAGAACCAGACTTGACGGAGAAACAGAAAGTATTTTAAAGTTCAGTTATGATGCCTTATGCGAGGAAGATCAA GCTTTATTTCTTCATATAGCCTGCTTTTTCGACGACCAACATATTGATAAAGTGGAAGAGTGTCTTGCACATAATTTCGA TGGTGTGAGAGGTCGTCTTCGAGTTTTAGATGAGAAATCTTTCATAACCTTCATCTGGGGATATATAAAGATGCATGATT TGCTAGCACGTTTGGGTAGAGAAATTGTTCGTAAACAATCCCCTAATGAACCTGGCCGGCGTCAGTTTTTGGTTGATGAT GGAGATATTTGCCAAGTACTACGTAATGATACAATAAGATTTCGCCAGCGAGTTCGGCACTTGATTTTCACCAGTATGGC TTCTTCACATGATCTGGAGGTAAGATCATCTCTGTTTGCTGCAGGTTACTTTTGTGAAGTAGCAGATGACTTTGCATTGG TTGTTTTTGGGATGCTACATGACATGGTGAAACTTCCGGAGTTAATGCCAAAGACCAGGTTAGCTGCTGTGCGAGTTTTT GCAAAAATGGGATGCTCACATGCTATTTCTAACAGAGCATTCAAGTCTGCTAGTGTAGGGACGGACTATCATAGTTCATT AACTGAAGTCATCTGTGTTACTGCAGATCTGTATGAAGCTATTGCTGCTGGAGGGTCATCAAACGAGGAAAATTTGGTTC CATTCCTGGTTTCTTTGACCAAGCTTGCTTCAAGATCTACTCATCTTGCTTCTGAACTTGTATGTTCTTCTTGCACTCAA TATGTTCGCCCTTTTTAA |
| AA seq | Len:486 aa MEKMKPLLCLDSNEARMIGIWGPSGIGKSTIARFLFSQHSHDFQLSVFMENIKRYYPRPCFDEYSAQLQLQKEFLSQIIN HEGVSICHLGVAQDRLKDKKLLVVLDDVDHSAQLDALAKVPSWFGPGSRIIVTTQDKKILNAHGINRIYKVDFPHFREAL EIFCMNAFCQNSPYDGFQDLACEVTYVAGNLSLGLRVMGSYFKGMHKEWEEELPRLRTRLDGETESILKFSYDALCEEDQ ALFLHIACFFDDQHIDKVEECLAHNFDGVRGRLRVLDEKSFITFIWGYIKMHDLLARLGREIVRKQSPNEPGRRQFLVDD GDICQVLRNDTIRFRQRVRHLIFTSMASSHDLEVRSSLFAAGYFCEVADDFALVVFGMLHDMVKLPELMPKTRLAAVRVF AKMGCSHAISNRAFKSASVGTDYHSSLTEVICVTADLYEAIAAGGSSNEENLVPFLVSLTKLASRSTHLASELVCSSCTQ YVRPF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |