Names & Information
Knowledge of BnaC03G0727600ZS:
| Gene Name | BnaC03G0727600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | clubroot disease resistance protein [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1686 nt ATGAGATTTCAATCGTTTTTGAAAGAAATTAAGAAACAGAGAAAGATGGTAGAAAAGAGAAAGAAGAGGAAAGGACATGA GCTTTCGAATCCAGCGAGAAAGAAGATCCGAGTGCAGAACCAGAGCCAAATTCAAGTTCCATCATCACCTCCACCTTCTC TGTCTCCTTCTTCACCTCCGTGTCCTTCATCACTTCCATCTTCTTTGTCTCCCTCATCACATCCGTCCTCTTTGTCTCTT TCATCTGCTCCATCTTCTTCGTCTCATAACTGGACACACGATGTTTTTCCAAGCTTCCGCGGGGAAGATGTCCGCATAGG GTTTCTAAGCCACATTCAAAAGGAGTTTAGAAGAAAAGGAATCACACCATTCATCGACAATGAGATCAGGAGAGGAGAAT CCATCGGTCCAGAACTCATAAGGGCCATTAGAGGATCTAAAATCGCCATCATCTTGCTCTCGAGGAACTATGCTTCTTCA AAGTGGTGCCTTGACGAGTTGGTGGAGATTATGAAGTGCAAAGAAGAGTTAGGCCAAACCGTAATCCCCGTTTTCTATAA AGTAGATCCATCTCATGTAAAGAAGCTGAGAGGATATTCTGGGAAAGTTTTCGAAAAAACTTGCCAGGGTAAAAGTAAGG AGGATACTGAAAAATGGAGACAGGCTTTGGAGAAGGTGGCGACAATTGCTGGTTACGATTCAAGCACCTGGGATAATGAA GCGGCCATGATTGAGGAAATAGCCACAGATGTTTCAAACAAGCTGATTAGTTCTGTTCCATCAAGTGATTTTAACAGCTT AGTTGGGATGAGAGCTCACATGGAAAATATGGATCTGCTCTTACGCTTGGATTCCAATGAGGTGAGGATGATAGGGATTT GGGGTCCGTCTGGAATTGGTAAGAGCACCATCGCCAGATCTCTATTTAGCCAACACTCTCCTGACTTTCAACTTAGCGTC TTCATGGAGAATATCAAAAGAGAGTATCCAAGACCTTGCGCACAACTGCAATTACAAAATAAGTTCTTGTCTCTAATACT CAATCAGAAGGATGTCACTATCCATCATTTAGGAGTTGCACAAGACCGACTAAAAGATAAGAAAGTGTTAGTTGTTCTCG ACGACGTGGACCAATCTGCGCAACTAGATGCCTTGGCGAAAGAACTTTGGTGGTTTGGTCCGGGAAGTCGGGTTATCGTC ACAACGCAAGATAAGAGAATTTTAAAAGCCCATCCGATTAACCTTATTTACGAGGTTGGTTTTCCACATGATGATGAAGC TCTTGAAATCTTCTGCATAAATGCTTTTGGTCAAAAATCCCCATATGATGGTTTTGGGGACCTTGCTCTGGAAGTTACAA AGCTTGTTGGTAAACTCCCATTGGGTCTAAGTGTTGTGGGATCTTATTTCAAGGGATTGTCAAAAGAGGAGTGGGAACAT GAGTTACCAAGGTTAAGAACTAGACTTGATGGAGACATTGAAAGTATTTTAAAGCTCAGCTATGATACGTTATGCAATGA CGATCAAGCTTTATTTCTTCACATAGCCTGCTTTTTCAACGGCCTACATATTACAATAGTGGAGGAGTGTCTTGCAGAGA ATTTTTCTGGTATAAAAGGTCGTCTTCGTGTTTTAGCTGAGAGATCTCTCATATCCGTCGACTCTGGGAGTTATAAAGAT GCATGA |
| AA seq | Len:562 aa MRFQSFLKEIKKQRKMVEKRKKRKGHELSNPARKKIRVQNQSQIQVPSSPPPSLSPSSPPCPSSLPSSLSPSSHPSSLSL SSAPSSSSHNWTHDVFPSFRGEDVRIGFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIRAIRGSKIAIILLSRNYASS KWCLDELVEIMKCKEELGQTVIPVFYKVDPSHVKKLRGYSGKVFEKTCQGKSKEDTEKWRQALEKVATIAGYDSSTWDNE AAMIEEIATDVSNKLISSVPSSDFNSLVGMRAHMENMDLLLRLDSNEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSV FMENIKREYPRPCAQLQLQNKFLSLILNQKDVTIHHLGVAQDRLKDKKVLVVLDDVDQSAQLDALAKELWWFGPGSRVIV TTQDKRILKAHPINLIYEVGFPHDDEALEIFCINAFGQKSPYDGFGDLALEVTKLVGKLPLGLSVVGSYFKGLSKEEWEH ELPRLRTRLDGDIESILKLSYDTLCNDDQALFLHIACFFNGLHITIVEECLAENFSGIKGRLRVLAERSLISVDSGSYKD A* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |