Names & Information
Knowledge of BnaC03G0739000GG:
| Gene Name | BnaC03G0739000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g11840D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=3 |
| NT seq | Len:2466 nt ATGGCCATCACCGATTTTTTCGCCGGTGAAATAGCGACTGAGCTACTGAAACAGCTGTTTATGATATCAGCCAAAGCATG GAAATACAAAAGCGTCGCTGAGAGGCTCATCGTCTTGATCGAGAACATGCAGCCGACCATCAAGGAGATTCAGTACAGCG GCGTCGAGCTCCCTCCTCACCGTCAGTCTCAGATCGGTATGCTCTCTAACACCTTAGAGAAAGGGAAGAAACTCACCGAG AAAGTGTTGAGCGCCCGTCGCTGGAACGTGTACAGACAGTTAACATTAGCGAGGAAGATGGAGAAGCTAGAGAAGGATAT CTCTAACTTCCTTAAGAATCAGATATTGACTCATATCCTCGCTGATGTTCATCTTCTCAGGGCTAACTCCGATGTAAGGT TCGATCGGGTTGATAGGAGCCTTGAGATGATGACTGAGCACTTGGGGTCGATGAAGATCGGTGGAGGAGGGATGATAAGG GAAGCCATGAAGATAGCAGAGGCGACGATGGAGATTGAGATGGGCAACGACGAGGAGAAGTTTGGTGTTGGGTTGGAGAT AGGTAAGAGGAAGGTGAAGAAGATGATGTTTAGCGCCGAGAGAGGGCTTATTGGTATCAGTGGCATGGGCGGTGTCGGCA AAACTACACTTGCTAGAGAGCTTGAACGGGACGTTGAAGTCCAATGTCATTTTGAGAACAAGGTTTTGTTTCTGACTGTA TCACAATCTCCGATGCTTGAGGAGCTGAGAGCACATATATGGGTGTTTGTGTCTGGTTATGAAGGTGTAAACCCGGTTCC AAACTGGAATTTACAGTACGAGGGCGGTGTTAAAACACAGAAGCTGGTGATTCTTGATGATGTTTGGACAAGAGAAGCGT TGGACGCCTTGACGTTTAATATCCCTGGTTGCACAACACTTGTGGTCTCACGGTCCAAACTCACAGAGCCTAAAGTCACT TATGATGTGGAAGTACTAAGGGAAGATGAAGCACTCTCCCTCTTCTGTCTCTGTGCATTTGGTCAGAAAACTATCCCTCC TGGTTTCGACAAAAAAATGGTCGAGCAGGTTTCTGGTGAGTGTAAAGGTCTACCTTTGGCTCTCAAAGTCACAGGGGCTT CACTAAAAGACCGACCTGAAATGTATTGGAAAGGAGCGTTGCAGAGGTTACAAAAAGGTGAACCTGCTGATGAAACTCAC GAGACTAGATTACTTCATCAAATGGAAGCTAGTCTAGAAAATCTTGACTCGACAACCAGAGAGTGTTTCTTGGATCTTGG CGCATTTCCTGAAGACAGGAAGATTCCTGTAGATGTTCTTATCAACATGTGGATTGAGATACATGATCTAGAGGAGGCCA TTGCTTTTGCCACTCTTGTTGATTTGTCGCACAAGAATCTACTTACCCTTGGGAAAGATCCACGGCTTGGCTCTTCATAT GCAAGCTACTATGATGTGTTTGTGACACAACATGATGTTCTGAGAGACTTGGCTCTTCATTTAAGCAACAAAGGGAAAGT AAACATAAGGAAGAGACTGCTGATGCCGAAAAGAGAGTCATCTCTTCCAAAAGAATGGGGAAGGAACAGTGATGAGCCAT ACAGAGCTCAGATAGTCTCTATTCATACTGGGGATATGGATGAGATGGGTTGGTCTGACTTTGACATGGACTTCCCTAAG GCAGAGATTCTAATACTGAACTTCTCTTCAGACAAATATGTTCTGCCTCCTTTCATCACTAAGATGAGCAAGCTTAGGGT CCTAGTGATCATCAACAACGGCATGTCCCCTGCTGTTCTCAATGACTTTTCGATTTTCGCCAACTTGTCATACCTAAGGA CTCTCTGGCTGGAGAGAGTTCATGTCCCTGAACTCTACAACACTACAGTTCCCTTGAAAAAACTCCACAAGATGTCTTTG ATCCTCTGCAAGATCAATAACAGTTTTGATCAGACAGGAGTTGACATCTCCAACCTCTTCCCAAAATTAGCTGACCTGAC GATAGATCACTGTGATGATCTCGTCTCACTACCTTCAAGCATCTGCGGCATGACATCTCTCAACTCCTTAAGCATCACAA ACTGTCCACGCCTCAGTGAATTGCCTAAGAACCTCAGTAAGCTACAAGCTCTTGAAATTCTGAGGCTATATGCTTGTCTT GAGCTAAAGGCATTGCCTGTGGAGATCTGTGAGCTTCCTCAGCTTAAGTACCTAGACATCTCACAGTGTGTTAACCTGAG TTGTCTTCCAGAGGAGATAGGAAAGCTAAAGACGCTTGAGAAGATAGACATGAGAGAATGTTTTTTCTCGGATAGACTTA GCTCTGCTGTTTCTTTAGAGTCTCTACGCCATGTGATTTGTGATAAGGACGTTGCGTTTATATGGGAGGAAGTTGAGAAG GCTGTTCCAGGGTTGAAGATTGAAGCTGCTGAGAAATGTTTCAGCTTAGATTGGCTCGACGAGTAA |
| AA seq | Len:822 aa MAITDFFAGEIATELLKQLFMISAKAWKYKSVAERLIVLIENMQPTIKEIQYSGVELPPHRQSQIGMLSNTLEKGKKLTE KVLSARRWNVYRQLTLARKMEKLEKDISNFLKNQILTHILADVHLLRANSDVRFDRVDRSLEMMTEHLGSMKIGGGGMIR EAMKIAEATMEIEMGNDEEKFGVGLEIGKRKVKKMMFSAERGLIGISGMGGVGKTTLARELERDVEVQCHFENKVLFLTV SQSPMLEELRAHIWVFVSGYEGVNPVPNWNLQYEGGVKTQKLVILDDVWTREALDALTFNIPGCTTLVVSRSKLTEPKVT YDVEVLREDEALSLFCLCAFGQKTIPPGFDKKMVEQVSGECKGLPLALKVTGASLKDRPEMYWKGALQRLQKGEPADETH ETRLLHQMEASLENLDSTTRECFLDLGAFPEDRKIPVDVLINMWIEIHDLEEAIAFATLVDLSHKNLLTLGKDPRLGSSY ASYYDVFVTQHDVLRDLALHLSNKGKVNIRKRLLMPKRESSLPKEWGRNSDEPYRAQIVSIHTGDMDEMGWSDFDMDFPK AEILILNFSSDKYVLPPFITKMSKLRVLVIINNGMSPAVLNDFSIFANLSYLRTLWLERVHVPELYNTTVPLKKLHKMSL ILCKINNSFDQTGVDISNLFPKLADLTIDHCDDLVSLPSSICGMTSLNSLSITNCPRLSELPKNLSKLQALEILRLYACL ELKALPVEICELPQLKYLDISQCVNLSCLPEEIGKLKTLEKIDMRECFFSDRLSSAVSLESLRHVICDKDVAFIWEEVEK AVPGLKIEAAEKCFSLDWLDE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | probable disease resistance protein At4g27220; K13459 disease resistance protein RPS2 (A) |