Names & Information
Knowledge of BnaC04G0155100ZS:
| Gene Name | BnaC04G0155100ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC04g12970D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:2814 nt ATGGCTTCTTCATCATCTTCTTCTTCTCCAGTGATTATCAATTGTGCACACGATGTATTCCTCAGCTTCAGAGGACACGA CGTCCGCCGCAAGTTCCGTTCCCACTTTCTCAAGGAGCTCGACCGCAAGGTAATCACCTTCAAGGACGATGAGATGGAAA GAGGCCGATCTATTGGGCCTGAGCTTATCAAGGCCATACAAGGATCCAGGATCTCAATTGTAGCGTTTTCCGAAAACTTT GCAAATTCGAGCTGGTGCTTGGATGAGTTAGCTGAGATTATGAGGTGCAGAGAAGAACGAGGCCAAATCGTGATACCCAT TTTCTACGACGTGGATCCTTCTCATGTCAGGTATCAAACCCACGCCTTCGGAGAGATCTTCGAAAAGACTTGCAAAGGCA GAAAGGAGGAAGATAAACATATGTGGCGGCAGGCTTTGACCCACGCAGCCAACATAGCCGGAGAGGATTCTCGGAATTGG CCTGACGAAGCTAAATTGGTCGAGAAAGTCGTCAATGATGTTTCAAGCAAACTGAATTCAACAACATCCAATGATTTTGA GGACATGGTGGGAATCAAAAGTCACATGAAAAACATGAATTCATTGTTGAATTTGGAGTCAGAGGAGGTGATCATGGTAG GGGTTTGGGGTCTATGTGGAGTTGGTAAGACTACCATTGGACGAGCTCTCTTTAGTCAACTCTCCTGTCAATTCCAAGGC AGCATTTTCATTGATAAGACTAAGAAGAATCTTACAAGGGCTAAATCAGACGACTACAACACACAATTGTACTTGCAAAC ACAGTTTCTGGCTGAGGTTCAGGACCAGAAGGACATAAAGATACAGGGTTTACGTGCGGTGGAAGAAAGGTTAGGACATA AGAGAGTTCTTGTTGTTTTTGATGATATGGATGATCATGTCCTCTTAAATGCCTTGGTGGGGAAAACTACATGGTTTGGT CCTAGAAGTAGAATTGTTGTAATTTCAGAAGATAGGGAGTTTCTAAAGGCCCGTGGAATTGGATCTGATCGTATTTATGA GGTGGCTTTACCGTCGGAAGAGCTAGCGTTCCAGATGTTCTGCCGATGTGCATTCCATCAAGACTCTCCACCTGATGGTT TTATAGAGCTTGCTACTGAAGCTGTAAAGCTCGTCGGGAACCTTCCACTGTGTCTCAACTTCTTGGGTTCGTCCCTTGAA GGGGTGAAGAAGGAGGAGTGGGCAGATAGGGTGCCTCAGATCAGAATTTTTATGAGTAAACAGATTGATAAAATATTAAG AGACGGCTATGATAGGTTAAAAGAAGAAGATAAGGCAATATTTCGTCACATCGCTTGTTTATTTAATCATAAGCCACGTG ACTACGTGATACGGTTGCTTGAAGATAGTAAGTTGGATGTTGACGTTGGACTCGTTACTCTAGCTGAAAGGTGTCTCATA AAGATATCAGGGGATAATATTATTAGGATGCACGAATTCCTGCAAGAGATGGGTAGAGAAATCGTACGTCAACCATGTAT TCATGAGCCTGGAAAACGTGAATTCTTAATGGAGTGTCAGGAGATTTGTGATGTACTTGCAAAAGGAACTGGAACTAAAA GTGTTTTAGGCATATTTTTGAACTTATCTGAAATGAAGGATACGTTATGTTTTGGCGAGGAAGTATTCGAAGGAATGACA AACCTTCGGTTTCTAAGAATCTACGGCATCTCACAAGAGGATAAAGAAATTGGTTTGGAATTTCGGCATCTCAACCTTAG TACGTTGAAATGGTGGGATGGCTCACGTAAGCCTTTAAAGGAAGGCAAATACTATATGGGGCGCCAGCTTAGATTACTTG AATGGTGGGGATACCCAATGTGGCGCTTGCCTTCTTACATCTGTGCAGAAAACCTTGTTGAACTCATAATGCCGGATAGC CGCCTTACGATGTTGTGGACTGGGGTTCAGCTGCTTAATAACCTCAAGAAGATAGATTTGCGGAGATCTAAAAAGCTGAA TGAACTCCCAAATCTTTCAACGGCCACCAATCTCGAGGAACTGTATCTTGAAGATTGCTGGAGTCTGTGGAAGATTACTT CCTCTATTCGTTATCTCAAGAAACTGAGGAAGCTAGACATGAAAAGATGCAAAGAACTGCTGCTGCTTCCAACCGATATT GACTTGGAGTCTCTCCATTCCCTCAATCTCAGTGGATGCTCCAAGTTAGAGAGTTTTCCTCACATTTCAAGGAATATTTC AAATCTTGTTCTTGATGAAACCAAGATTGAAGAAGTTCCTGAAAGGATAGAAGATATCTCTGGGCTCAATTACATATTGA TGACCGGTTTCAGCAACTTAAAATATTTTTCTTCCAACATTTCGAAACTGAAACATTTTGAGATGATGTTGTTTACAGTG GTGACGACGACATATGATAGTGGCATCATGGACAATAGGACAAACGATGTCTTCCTAAGCTTCCATAGGGAAGATGTTCG CAAAGCTTTTGTGAGCTACTTGCACAAGGAATTTATGAGAGACCAGGACCTGGCTACTAATGTTGTAAACGAGATAAGAT CTTCAAGAATCGCAATAGTCATTCTTACAGATAACTACATGTCTTCGGAACGGTGCTTGGATGAGTTGGTGGAGATCATA GAGTGCAGCGAAGAGATTGGTCAAAAAGTGATCCCCGTTTATTATGATGTGGATACTGTTAATATCAGCAGGCAGATCCA AGACATTATTAAGACCGAATCGTACCCACAAAAACTGAGACAAGCTTTTACTGTAGTAAGCCAACTTCAGGGATATAATT TCTCAACCTGGTAA |
| AA seq | Len:938 aa MASSSSSSSPVIINCAHDVFLSFRGHDVRRKFRSHFLKELDRKVITFKDDEMERGRSIGPELIKAIQGSRISIVAFSENF ANSSWCLDELAEIMRCREERGQIVIPIFYDVDPSHVRYQTHAFGEIFEKTCKGRKEEDKHMWRQALTHAANIAGEDSRNW PDEAKLVEKVVNDVSSKLNSTTSNDFEDMVGIKSHMKNMNSLLNLESEEVIMVGVWGLCGVGKTTIGRALFSQLSCQFQG SIFIDKTKKNLTRAKSDDYNTQLYLQTQFLAEVQDQKDIKIQGLRAVEERLGHKRVLVVFDDMDDHVLLNALVGKTTWFG PRSRIVVISEDREFLKARGIGSDRIYEVALPSEELAFQMFCRCAFHQDSPPDGFIELATEAVKLVGNLPLCLNFLGSSLE GVKKEEWADRVPQIRIFMSKQIDKILRDGYDRLKEEDKAIFRHIACLFNHKPRDYVIRLLEDSKLDVDVGLVTLAERCLI KISGDNIIRMHEFLQEMGREIVRQPCIHEPGKREFLMECQEICDVLAKGTGTKSVLGIFLNLSEMKDTLCFGEEVFEGMT NLRFLRIYGISQEDKEIGLEFRHLNLSTLKWWDGSRKPLKEGKYYMGRQLRLLEWWGYPMWRLPSYICAENLVELIMPDS RLTMLWTGVQLLNNLKKIDLRRSKKLNELPNLSTATNLEELYLEDCWSLWKITSSIRYLKKLRKLDMKRCKELLLLPTDI DLESLHSLNLSGCSKLESFPHISRNISNLVLDETKIEEVPERIEDISGLNYILMTGFSNLKYFSSNISKLKHFEMMLFTV VTTTYDSGIMDNRTNDVFLSFHREDVRKAFVSYLHKEFMRDQDLATNVVNEIRSSRIAIVILTDNYMSSERCLDELVEII ECSEEIGQKVIPVYYDVDTVNISRQIQDIIKTESYPQKLRQAFTVVSQLQGYNFSTW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |