Names & Information
Knowledge of BnaC04G0252800ZS:
| Gene Name | BnaC04G0252800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC04g20460D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3165 nt ATGGCTTCTTCCTCAGAGACTTTCATCGCTATTCGCTACTCTTATCTCATGGCTTCTTCCTCACCTCGCACATGGATAAA CCACATCTTCACGAGCTTCCACGGACCTGACGTCCGTAAAACCTTTCTCAGTCATTTACGCAAACAGTGTACCAGCAATG GGATTTCGATGTTCAATGACCAAAGGATCGAGAGAGGCCACACTATCTCCCCTGCTCTCACACAAGCGATTAGAGATTCG AGGATCTCGATCGTGGTGCTCACGAAGAAGTATGCTTCTTCCAGCTGGTGTTTGGATGAGCTGTTGGAGATTTTGAAGTG CAAGGAAGAGATCGGACAGATAGTGATGACCGTCTTCCACGGAGTAGATCCTTCTGATGTTCGGAAACAGACCGGAGATT TCGGGAAAGTCTTCAAGAAAACATGTGCTGGTAAAGCAAAGGAGGAGAAGCGAAGATGGAGTCAAGCTTTGACCCATGTG AGCAACATAGCCGGCGAACACTTCCTGAATTGGGACAATGAATCAGAGATGATTGAAAAGATTGCTCAAGATGTTTCAAA CAAGCTAAATGCTACAATATCTAGGGATTTTGAAGACATGGTTGGTATTGAAGCACACTTGGAGAGGATGCAGTCTTTGC TACATTTAGATGATGGAGCTATGATTGTTGGAATCTGTGGCCCTGCTGGCATTGGTAAGACTACCATCGCCAAAGCTTTA CATTGCCGACTCTCTAGCAGCTTCCAGCATTCTTGTTATATGGATCTTAGAGGAAGCTGTAACAGTGGTCTTGACAAGCA TGGACTGAAGACGCATTTACAAGAGCTACTTCTTTCCAAGATTTTTAACCAAAATGATGTAAGGATACACCATTTAGGTG CGATAGAGGAAAGGTTAGGCTACCTTAAAGTTCTTATCATTCTTGATGATGTGGACAATCTAAAGCAACTAGAAGCTCTG GCTGATAAACCTAACTGGTTTGGTACTGGAAGCAGGATTGTTGTAACCACTGAAGATCAAGAGCTATTAGAGAAACATAA TATAAAAAAAAAATACATTGTGGGTTTTCCAACTAAAGTAGATGCTCGTCAGATCTTCTGTAGATCTGCATTCAAACAGA GCTCTGCAACTTATGGTTTTGAGAAACTTGTTGACAGAGTAATAAAGCTTTGCAGCAAACTTCCTTTGGGTCTCAGTGTC ATGGGTTCATCCTTACTCGGAAAGAAAGTAGCTGACTGGGAAGGTTTACTGCAGAGGCTAGAAAATAGCCTTGATCGAGA TATCGAGGTAGTACTTAGAATCGGATATGACATTTTACATAAGGATGATCAGTTCCTATTTCAGCTCATTGCATGCTTCT TCAACTACCAAGACGAAGATCTAGTGAAAGAAATGCTCGTTGATAGTCACTTGAATGTTAGACTCGGGTTAGAAATTCTG GTGTACAAATCTCTCATAAAAAAAACTGCAGAAGGAACTATAGTGATGCACAAATTACTACAACAAATGGGTAGAGATGT GGTTCGTCTACAAGAGTCTAAGAAATGCCAAATCTTAATTAGTTCTCACCAGATTTGTGATGTCCTAGTAAATGATTCTG ATAGTACAAGTGTGATGGGTATATCTTTTGATACATCCACAATCCCAAACGGCGTGAATATAAGCGCACAAGCTTTTAGA AGAATGCGTGGTCTTCGATTTCTCAGCATCTACGAGACAAGACGTGATCCAAATGTTAGAGTGAATTTACCTGAGGACAT GAATTTTCCACCTCTTCTAAGGTTATTACATTGGGAGGTATATCCAGGAAAGTGTCTTCCTCGTACACTAAGGCCGGAAC ATCTTGTGGAACTCAGTTTTGTTAGTAGCAAGCTCGAGCAGCTTTGGCAAGGAATCCAGAACCTTACAAATCTTAAGAAG ATGGATTTGTCCGGGTCACAGAGTTTGAAGGAAGTCCCTGATCTTACAACTGCTACAAGTCTCAAGAGATTGGATCTAAC AGGTTGCTGGAGTTTGATAGAGATTCCTTCTTCTATTAGAGGTCTTCATAAACTAGAGGAGTTGGAGATAAATTTATGTA TAAGTCTACAAGATGTTCCGACTCACCTCAACTTGGCATCTCTTAAGTCACTCAGGATGGTAGGATGCTGGCAACTGAAA AAAATTCCAGATGTCTCGACCAACATCAGATCACTTCTAATAGGAGATACAATGTTACAAGAGTTTCCTGAATCAATTAG GCTTTGGTCTCACCTTGAGACTCTCAATATATATGGCAGTCTCCTTACAGTGCCTCTTTTGAAAATCACGTTGCAAGAAT TTTCCCTCCCTGCAATTGAGAGGATTCCGGATTGGATCAAAGATCTTCATGGATTAAAGTTTATTTCTATAGCTGGCTGC CCAAAACTTGCATCACTGCCAGAGCTCCCTCGCTCGCTCAGAAAACTAACAGTGGACAATTGTGAGTCACTGGAGACGGT ATGTTTTCCTTTTGACAATCCAACAATTGAGTTTCTCTACTTCCCCAACTGCTTCAAGTTGTGCCCAGAAGCAAAGGGAG TAATTACACATCAATCATTTAGAGCATACTTTCCAGGAAAAGAGATGCCTGCTGCAGAGTTCGATGATCATCGAGCTATT GGAGGTTACTTAACCATCCGTCCTGCTATCTGCAAATTTAGGATTTGCCTGGTGCTTTCCCCTAAACCGGATATGGATGA ACCTTATTTCAGATTACTGTTCCGCATACGTGCAAAAGGTTGTCCCAGTGACGAAGACATGCTTTGGTTAACTCTCCCTA AAATCCGAGGGGAACATCTTTTTATATTTCATATTGAGTTTGTTGAACAGCACGAGGAGATGTTGTTCAAATTCAGCACC TCATCCCATGAAGTCGACGTTACTGAATGTGGTGTACAGGTCTTGACAGATGAAGCACAAGGAGCGATGAATCTTGTTCA GAACAAGTGTCTGAAGACAGGCGATGAAGTTCTCTCTGATGATGAGGGCAATGAATTTGATGAACCTATAGTAAGGATCT CTAAGGGTTATAAAATGTTTCTACCTGTAGTTTTTAAGTTCCTTTTGAGTTTGATTTCAAGTGTTCTTGTGTATAGCTTT CTAAAAGAAGCATTAACACTTGGTGAGCTGAAATCTGGAAACTGA |
| AA seq | Len:1055 aa MASSSETFIAIRYSYLMASSSPRTWINHIFTSFHGPDVRKTFLSHLRKQCTSNGISMFNDQRIERGHTISPALTQAIRDS RISIVVLTKKYASSSWCLDELLEILKCKEEIGQIVMTVFHGVDPSDVRKQTGDFGKVFKKTCAGKAKEEKRRWSQALTHV SNIAGEHFLNWDNESEMIEKIAQDVSNKLNATISRDFEDMVGIEAHLERMQSLLHLDDGAMIVGICGPAGIGKTTIAKAL HCRLSSSFQHSCYMDLRGSCNSGLDKHGLKTHLQELLLSKIFNQNDVRIHHLGAIEERLGYLKVLIILDDVDNLKQLEAL ADKPNWFGTGSRIVVTTEDQELLEKHNIKKKYIVGFPTKVDARQIFCRSAFKQSSATYGFEKLVDRVIKLCSKLPLGLSV MGSSLLGKKVADWEGLLQRLENSLDRDIEVVLRIGYDILHKDDQFLFQLIACFFNYQDEDLVKEMLVDSHLNVRLGLEIL VYKSLIKKTAEGTIVMHKLLQQMGRDVVRLQESKKCQILISSHQICDVLVNDSDSTSVMGISFDTSTIPNGVNISAQAFR RMRGLRFLSIYETRRDPNVRVNLPEDMNFPPLLRLLHWEVYPGKCLPRTLRPEHLVELSFVSSKLEQLWQGIQNLTNLKK MDLSGSQSLKEVPDLTTATSLKRLDLTGCWSLIEIPSSIRGLHKLEELEINLCISLQDVPTHLNLASLKSLRMVGCWQLK KIPDVSTNIRSLLIGDTMLQEFPESIRLWSHLETLNIYGSLLTVPLLKITLQEFSLPAIERIPDWIKDLHGLKFISIAGC PKLASLPELPRSLRKLTVDNCESLETVCFPFDNPTIEFLYFPNCFKLCPEAKGVITHQSFRAYFPGKEMPAAEFDDHRAI GGYLTIRPAICKFRICLVLSPKPDMDEPYFRLLFRIRAKGCPSDEDMLWLTLPKIRGEHLFIFHIEFVEQHEEMLFKFST SSHEVDVTECGVQVLTDEAQGAMNLVQNKCLKTGDEVLSDDEGNEFDEPIVRISKGYKMFLPVVFKFLLSLISSVLVYSF LKEALTLGELKSGN* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |