Names & Information
Knowledge of BnaC04G0332800ZS:
| Gene Name | BnaC04G0332800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC04g27190D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3180 nt ATGGCTTCTTCTTCATCTCTATCTCACAGTTGGTTTTATCACGTCTTCCTGAGCTTCCTTGGAGAAGACGTGCGCAAAGG CTTTCTTAGTCACGTTCGGAAAGGGCTCGAAAGCAAGGGAATCATAGCTTTCGTTGATGAAGAGATCAAGAGAGGCGAAT CTGTCGGTCCCGTCCTTGTAGGAGCGATCAGACAATCAAGGGTTTCCGTTGTCTTGCTCTCCCCTAACTACGCTTCATCA AACTGGTGTCTGGACGAGTTGGTGGAAATCATGAAGTGCAGGGAAGAGTATCAACAGACAGTGATGACCATTTTCTACGA AGTGGATCCATCTGATGTTAGGAAGCAGACCGGAGATTTCGGGAAAGCCTTCGATGCAACCTGTGTGGGAAAAATAGAAG AGGTGAAGCAGGCATGGAGGCAAGCTTTGACGGATGTCGCGGGTGGTTACCACACTAGCAACTATGACAATGAAGCTGAA ATGATCAACAAAATTGCCTCAGATGTTACGGCTGTGTTGGGTTTTACACCATCAAAAGACTTTGATGACTTTATTGGCAT AGGAGCTCGTATCATAGAGATAAAGTCTAAGTTGATCCTACAATCAGAAGAAGTTAAGGTGATTGGGGTTGTGGGTCCTC CCGGGATTGGAGTGGCCCAAGAAATGATGAGTGACAAAAAAGTGTTGGTTGTTCTTGATGAAGTGGGTAGCTGGTGGCAA CTAGCGGCAACGGCTGACCAGCGTGGATGGCTCGATCCCGGAAGTATAATTATTATTACAACTGAAGATAAAAAACTTCT CAAGGCACTCGGACTCGGGATCAATCATATCTACCAGATGGAATTTCCAACTTCAAGTGGGTCTCTGCAGATCTTCTGCC AATATGCTTTCGGTCAAACGTCTCCATATTACGGTTTTGAAAGCCTTGCTTGGGAAGTTACTAGTCTTTCTGGTGATCTT CCTCTAGGACTGAGAGTCATGGGATCGTATCTACGAGGAATGTCCAGGGACTACTGGATAGACGCACTACCAAGGCTCAG GTCTAGCCTTGACACAGAAATTGAATCAACTTTAAGATTTAGCTACGACGTCCTAAGTGATAAAGATAAAGCTCTTTTCC TGCATATTGCATGTTTCTTTGTTGGTTTCGGGGAAGATTTCATTAAGAGATGTCTTGAAAAAAGTGGTTTGGACGTCAAC CATGGGCTTCAAGTCTTAGCTAATAAATCTCTTTTATCTATAGAGAACGGATACGTAAAAATGCATTGTTTACTGCAACA AATGGGTAGAGAAATTGTCAAGAAAGAGTCTTTAGAGGAGCCTGGGCATCGACAGTTCTTGATGGATACCATGGAGATTT CTGATGTCCTTGAAGAAGATACTGGTACTGGAAAAGTTCTAGGCATAAAGTTGGATACTTTAAAGAACAAGAAAATCCAA ATAAGTAAAAGTGCTTTCCAAGTGATGAATAATCTCCAGTTTCTACATGTCACCTCTGGACGCTCTCGTAACGTACGCAT ACCCGAAGGCCTCAATAGTCTTCCCGACAAACTCAGACTTATAAGTTGGGATAGATGTCCATTGAGATTTTGGCCTTCCA AGTTCTCTGGCAAGTTTCTTGTCCACCTAATCATGCCACATAGCAAATTTGAGAAGCTCTGGGAGGGAATCAAACCTCTC CATTGCCTCAAGCTGATGGATTTGAGTTACTCCAAGTCTCTGAAAAAGATTCCAGATCTCTCAAAAGCAACTAGTCTCGA GGAATTAAATCTCAGTTACTGCAAAAGTTTGTTAGAGCTCACAAGCTCTATTGGCAATGCCACTAAGCTTACAATCTTCA ACCTTAGGGGTTGTTCGCTTTTGAAGGAGCTCTCCTCTTCTATTGGGTGTACAAACATCATCGACTTCCCAAATGTTCCT GGCAGCATTGTAGAGTTGGTGTTGAGCTGTACAGGGATAGAGGAGGTTCCTCCATTGATTGGGAATCTATTTCGTCTGCG TAAACTATTTATGTATGGGTGCAAGAAGCTGAAAACTATATCTCCAAACATTTCAAAGCTGGAGAATCTTGAGTTACTTG CTTTGTGTAACCGTGGTGAGATTGAGCATGATTATGAAAGGCTCCATCTATTTAATTATCATAACTTATTTCAAGCAGTT ATTAACTGGAGGGGTGATTTGAAGCGCAGTTGGGAATTACGATCAGACTTCAAGGTTCGCTACATTTTTCCGATATGTCT ACGGGAGAAGGCTCTTTCATCTCCAATATCATTAAGATTAGCCGGTGATAGTGTGGAGACTATTCCAGATTGCATCATAA GTCTCTCGGGGCTAATTAAGCTCAACGTCATAGCATGCAAAAAGCTTGTAGCACTTCCACAGCTCCCAGGTTCCCTTTTA TCTATAGATGCAGGAGATTGTGAATCCTTGAAGAGAATAGACTCTTCTTTTCAAAATCCAAATATTTGCCTAAAATTTTC TAACTGCTTTAACCTGAATCGAGAAGCTAGAAAACTCATCCATACATCAGCTTGCAAATATGCGTTCTTACCAGGTGAAA AAGTGCCAACAAACTTCACTCACCGAGCTAGCTCAGGTTCCCTAACGATCAATTTGACTCCAACACCTCTTCCTTCATAC TTCAGATTTAAATCTTGCATTTTGCTGTCAGAAGGTCAAGCAGTGAACAATTCATTGATGGATGTATCTTTTAGCGTCAG GAGTAAACAGAATGGCCTCATAGTCGGACGTGGATCAACCCAGCTCGATATTCCATATCTATCTCGATATGAAGAGCATC TCTATATATTTGAGGATTCTTTCTCTCTAAACCAGGATTTCCCTGAAGCCGAAGAAACCACTTTCAGTGAGCTTACTTTT GCGTTCAAACTCCATGATAAAACCTGGCAGAGTTTATCAGTATGCACACTATATCAAGGTTCTTACAGTCTCAACCTGCA TCAAAAAAGCAAAAAATCTCATCCAGACATTAGATTGCGAATCTTCACTCGTACCGGGTGTAGAAGTGCCTGCACACTTT ACTCACCAATCTACTTTAGGTTCCCAAACGATCAATTTGACTCCAGAATCTCTTCCTTCATCCTTCAGATTCAAAGCTTG CATCTTGCTGTCAAGAGACAAACATTTTGTTTTGTTCTGAAAGAAAAAGGAATTCAGTGA |
| AA seq | Len:1060 aa MASSSSLSHSWFYHVFLSFLGEDVRKGFLSHVRKGLESKGIIAFVDEEIKRGESVGPVLVGAIRQSRVSVVLLSPNYASS NWCLDELVEIMKCREEYQQTVMTIFYEVDPSDVRKQTGDFGKAFDATCVGKIEEVKQAWRQALTDVAGGYHTSNYDNEAE MINKIASDVTAVLGFTPSKDFDDFIGIGARIIEIKSKLILQSEEVKVIGVVGPPGIGVAQEMMSDKKVLVVLDEVGSWWQ LAATADQRGWLDPGSIIIITTEDKKLLKALGLGINHIYQMEFPTSSGSLQIFCQYAFGQTSPYYGFESLAWEVTSLSGDL PLGLRVMGSYLRGMSRDYWIDALPRLRSSLDTEIESTLRFSYDVLSDKDKALFLHIACFFVGFGEDFIKRCLEKSGLDVN HGLQVLANKSLLSIENGYVKMHCLLQQMGREIVKKESLEEPGHRQFLMDTMEISDVLEEDTGTGKVLGIKLDTLKNKKIQ ISKSAFQVMNNLQFLHVTSGRSRNVRIPEGLNSLPDKLRLISWDRCPLRFWPSKFSGKFLVHLIMPHSKFEKLWEGIKPL HCLKLMDLSYSKSLKKIPDLSKATSLEELNLSYCKSLLELTSSIGNATKLTIFNLRGCSLLKELSSSIGCTNIIDFPNVP GSIVELVLSCTGIEEVPPLIGNLFRLRKLFMYGCKKLKTISPNISKLENLELLALCNRGEIEHDYERLHLFNYHNLFQAV INWRGDLKRSWELRSDFKVRYIFPICLREKALSSPISLRLAGDSVETIPDCIISLSGLIKLNVIACKKLVALPQLPGSLL SIDAGDCESLKRIDSSFQNPNICLKFSNCFNLNREARKLIHTSACKYAFLPGEKVPTNFTHRASSGSLTINLTPTPLPSY FRFKSCILLSEGQAVNNSLMDVSFSVRSKQNGLIVGRGSTQLDIPYLSRYEEHLYIFEDSFSLNQDFPEAEETTFSELTF AFKLHDKTWQSLSVCTLYQGSYSLNLHQKSKKSHPDIRLRIFTRTGCRSACTLYSPIYFRFPNDQFDSRISSFILQIQSL HLAVKRQTFCFVLKEKGIQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |