Names & Information
Knowledge of BnaC04G0341900GG:
| Gene Name | BnaC04G0341900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC04g31890D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:1899 nt ATGTTCTGCCGATGTACGTTCGGACAAGACTCTCCACCTGATGGTTTTATGGAGCTTGCTAAATATGCTGTAGACTTCAC CGGGAATGTTCCACTGGCTCTCAATGTTTTGGGTTCATCCCTCGCTGGGTTGAAGAAGGAGGAGTGGGAAAAGAGGATGC CTATGCTGGTAAATCGTATGGCTAGACAGATTGATAAAACATTAAAAGACAGCTATGACAGGCTAAAAGAAGAAGATAAA GCTATATTCCGTCACATAGCATGCTTATTTAATCATAAAGCATGTGACTACGTGAAACGATTGCTTGAAGATAGTAAGTT GGATGTGGATGTTGGACTTGTTACTCTAGCTGAACGGTGCCTCATTCAGATATCACAGGATAAGATCATTAGGATGCACG ATCTTCTGCAAGAAATGGGTAGAGAATTGGTCCGTCAACCATGCATTTTGGAGCCTGGAGAGCGTGAATTCTTGTTGGAT TCTAAGGAGATCTGTGATGTACTTGTTGACGGAGCTGGAACTAATAGTGTTTTGGGCATATTTTTGAACTTATCCGAAAT GAAGGATACATTATCTATTAGCGAGGAGGCATTCAGCGGAATGAAAAACCTTCGGTTTCTAAGAATCTGCGGGGTCCTAC AGGATGATAAAAAAATCGTTTTTCAGTTACGGGGAGGCAAATATCATGTCAATTATTTTGCAGAAGAGTGTGACCTTGCA ATGCCAACATCGGCGAACCCAACGAGATCTGAAATCCTTCGCGTTCCAGTATTAAAATCATCATCATATTCTCTTGATAG CGAGATGGATGACATTTCGTTATCAGGTGGGTCTTCTCGCAATTGGAAGAATGACGTCTTCCTAAGCTTCTATGGGAATG ATGTTCGCAAAACTTTAATCAGCCACTTGTACAAGGAATTCAGTATCAGAAGAATTAGTGCAATTAATGATGATATGCTT GCGTCAGGCGATGATCTGGCCACTGAGCTTGTCCATGGGATAAGAGAATCAAGAATAGCTATAGTTGTGCTTTCAAATAA TTACGCTTCTTCGAGCTGGTGCTTGGATGAGTTGGTGGAGATCATAAAGTGCGGCGACGAGATTGGTCAACAAGTGATAC CCGTTTATTATGGTGTGGAACCTGCTCATATCAGAACTCAGATCCTAGACCTTGGAAAGGCCTCCAAGAAAGGGTATACA GTAGACAATTACAAGCAACAGAAATGGGTGGAAGCTTTGACTGTATTAGACCAACATAAGGGATATTATTTCACCGACTG GGACTCTGAAGCGGAGATAATTCAAAAAATGGCTGATGATATTTCTTTTGCACTAAATATTACACCAAAAGAGTATTTAG ATGTGGTTGGAGCAACAATGCCTAGTAGTCTAAACCAGGAAACTGGGAAAGCACTATACGATAGGTTAAATTGGAACGAG AAGGTTCTGTTTCGTCATATTGCTTGCTTTCTCAATAATGAGACATATGAGAATGTGATGCGATTGCTGGAAGACAGTGG GTTGGATGTTGGAGGTGGTCTTAAGATTTTATTTGATGCATCTCTGATACAAATATCAGAAGAGAGAGTCATAAGTATTC ACCATGTGGTGCAAAAAATAGGCAGAGATGAAGTTCTTGAACCATTCATTCACCAGCCTGCAAAGCGTCAATTATTGATG GATACTGGCGAGGGTTGCGACGTACTTATTGATCAAACTGGCAATGAGGATGTGGTCAGCATTTCGTTTAAGTTATCAGA AATAGAGACATCGAGAAGGGATGAAAGAGTCATAGGAATGAAGAAGTTGCAGTTTCTGAGGATGTTCAAGGAGAGTCTGT ATGGTAAAGAAGTCAGATTTCATTTAGTAAAAGGCCTCCTCTTTGTGGGAATACCTTGA |
| AA seq | Len:633 aa MFCRCTFGQDSPPDGFMELAKYAVDFTGNVPLALNVLGSSLAGLKKEEWEKRMPMLVNRMARQIDKTLKDSYDRLKEEDK AIFRHIACLFNHKACDYVKRLLEDSKLDVDVGLVTLAERCLIQISQDKIIRMHDLLQEMGRELVRQPCILEPGEREFLLD SKEICDVLVDGAGTNSVLGIFLNLSEMKDTLSISEEAFSGMKNLRFLRICGVLQDDKKIVFQLRGGKYHVNYFAEECDLA MPTSANPTRSEILRVPVLKSSSYSLDSEMDDISLSGGSSRNWKNDVFLSFYGNDVRKTLISHLYKEFSIRRISAINDDML ASGDDLATELVHGIRESRIAIVVLSNNYASSSWCLDELVEIIKCGDEIGQQVIPVYYGVEPAHIRTQILDLGKASKKGYT VDNYKQQKWVEALTVLDQHKGYYFTDWDSEAEIIQKMADDISFALNITPKEYLDVVGATMPSSLNQETGKALYDRLNWNE KVLFRHIACFLNNETYENVMRLLEDSGLDVGGGLKILFDASLIQISEERVISIHHVVQKIGRDEVLEPFIHQPAKRQLLM DTGEGCDVLIDQTGNEDVVSISFKLSEIETSRRDERVIGMKKLQFLRMFKESLYGKEVRFHLVKGLLFVGIP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |