Names & Information
Knowledge of BnaC04G0367900ZY:
| Gene Name | BnaC04G0367900ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng11240D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:3087 nt ATGACCATCTTTTACCAAGTTGATCCGTCCGATGTACGGAAACAGACTGGAGATTTCGGAATAGCCTTCAAGAAAACATG TGAAGGGAAAACTGAGGACGATAAGAAGAAATGGATGGAAGCTTTGGCATGTGTAGCAAACATTGCTGGAGAGCACTCTC TTAACTGGACTGATGAAGCGGATATGTTGGAAAAGTTTGCCACTGATGTTTCGAACAAACTGAATATTACACTGTCAAGG GACTTTGACGAGATTGTGGGACTGCAAGCTCACTTGAGAAAACTGATCACTTTGTTATGCTTCGAGTGTGATGAAGCAAA GATGATTGGGATTTGGGGTCCTGCGGGAATCGGTAAGTCCACCATTGCTAGAGCTTTATTCAATCACCTTTCTGTCGATT TTGGACTGAGATGCTTTATGGGGAACCTCAAGGGTAGTTATAAGAGCATAATAGGTGTTGATGATTATGATTCCAAGTTG GGTTTGCAAAGCCAACTTCTGTCTAAGGTTTTGAACCAAAGGGATATGAGGGTACATCATTTAGGTGCTGTAAAAGAATG GCTACAAGATCAAAGAGTGCTTATCATTCTTGATGATGTAGACGATCTAGAGGAACTAGATGTTTTGGTTAGAGAACTTT CTTGGTTTGGTTTAGGAAGTAGGATCATTGTTACAACTGAAGACAAAAAGATTTTGAAAGCACATGGGATACAAGATATC TACCATGTGGGTTTTCCATCTGAGAAAGAAGCTCTTGAGATCTTATGTCTATCTGCTTTCAAACAGAGATATGTACAAGA TGATTTTGAAAAGGTTGCATATAGAGTAGCATACCTTTGTGGGTATCTTCCATTAGGCCTTTGTGTTGTGGGTTCATCAT TACGTGGGGAGAGCCAGGAAGAGTGGGAGCTTCAGTTATCTAGGATCGAAAATAATCTTGATAGAAAAATCGAAGACGTT TTAAGGGTGGGATATGACAGGTTGTCAAAAAAAGATAAAGCCCTGTTTCTCCACATCGCATGCATCTTCAACTTTGGTAG CGTTGACCATATGACAAGCATGCTCGCCGATTGTAACATGGATGTCAAAAATGGGCTGAAGACCCTAGCCATCAGATCTC TTGTGCAACTTCATATAATGGATTATGAGATGCACTCTTTACTCCAACAGTTGGGTAGACAAGTAGTACATGAACAGTCA GATGAGCCTGGAAAACGCCAGTTTTTAGTGGAGGCTGAAGAGATCCGTCATGTATTAGCAAATGAAACGGGCACTGGATC GGTCATAGGTATATCATTTGATATGTCCAAGGTGGGTAAATTCTCTATAAGTGGGCGAGCCTTTGTAGGAATGCGTAATC TTAGATTTTTAAAGATGTATAACTCTGGGGGATTGAGGATAACAGGACACATGAAATATCTACCTCAACTAAGGTTACTA CATTGGGATTCATACCCCAGAAAACGTCTTCCTCCAACATTTCAGCCCCAATGTCTTGTTGAGCTCTGTATGATATTCAG CAATCTTGAGAAGCTCTGGGGAGGAATCCAGTCTCTTGCAAATCTCAAGAAGATAGATTTGACCTTCTCCTCTAGGTTGA AAGAAATACCAAATCTTTCAGAGGCTACTAATCTTGAAAGACTATCACTTGGCCATTGCTCAAGTCTGGTGGAGCTTCCC TCGTCTATTAGGAACCTACACAAACTGAAAGTGTTGTGGATGGAAGGCTGCAAAAAGCTACGGGTTATTCCCACCAACAT CAATTTAGCATCTCTTGAGAATGTTTGCATGGATGGTTGCTTGCGATTGAGAACGTTTCCAGATATCTCGAGTAACATCA AACATCTTGATATAAGGAACACAAAGATAGAAGATGTTCCTGCATTCGTAGCTGAAAGATGGCTTTGTCTTGACACGTTA TATATAGGCAGCAAAAGCGTCTGTCTCTCCTTCTATAAACCAAAATCTGCGTATATTACTCTGGACGACTGCAAGTGTGT TAAATCAGAAAAAGATGCGATAAGAGTAACTTCCCTTTTCTACAACCCAATGATAGGAATCAGGTTGTTCAACTGTTTTT CACTAGATGAAAAAACAAGAAGAGTAATCATTCAACAATGGGATTACAAATTTGTATGTTTACCAGGCAAAGAAATCACT CCAGAGTTCACTCACAGAGCCAAAGGAAACTCCATAACCATCTCTTCAGGGACTTTCTCTGCTTCCTCAAGATTTAAGGC TTGCCTCCTGCTTTCTCCACCAGGAGAGGTCTCGGACCCCCTGAGAATCATTGTTTGTCGTCTAATAAGCAAAGGTGTTG TCATCAATGAACTTAAATGCTATCCGATTAATCCTGCACTTCTATCTGAACACCTGTTAGTCTTTTCTGGGGCCCTGTTT AAAGAGCACATATGTTGTGAACTTGACGCTACTACGAGTGAAATTCGGTTTGAATTCAACTGCGACTATTTTATCGAGTG TGGTGTCCAGATGTTGGCGGAGGAAGGTGAGATAAAACTAGCTTCCTCTTTCCACGATCCTAACAGAGAAGTGAGGTTCC TCAACTGTATGAAACTAGATGAAGAAGCAAGAAGAGCAATCATACAACGATGGGCTTATAAATATGTATGTTTGCCAGGT AAAGAAGTCCCTTCTGAGTTCACTCACAAAGCCAAAGGAAACTCTGTAACCATCTCACAGGGGACTCTATCTGCTTCCAC AAGTTTCAGGGCTTGCATCCTGCTTTCACCAACCCTACAACACCCTCTGTGGTTCGGCTATAATATTGATTGTCGTCTAA GAAGCAAAGAACGCAGATGCGTTGAAGTGGACTCGGATATTCAATTTGAATTCAGCTGCTACGAAAAACACTCTAAGATT ATTGAGTGCGGCGTACAGATCATGGCGGAGGAAGGTGAAAGTAGTAGCAGCAGAGAATGGAATAAACAGAGTGATGGAGC CGTTAAGGTCTCTAAAGATGAAAATGTCATCAAAACCAACAACCATACATCTTGGTGGAGTGGGCTTAAAAAGCTTGGTC TGAGAAAGAACAAGAAAAAATCAGACGGGGTGAAACTTTTAGATTAA |
| AA seq | Len:1029 aa MTIFYQVDPSDVRKQTGDFGIAFKKTCEGKTEDDKKKWMEALACVANIAGEHSLNWTDEADMLEKFATDVSNKLNITLSR DFDEIVGLQAHLRKLITLLCFECDEAKMIGIWGPAGIGKSTIARALFNHLSVDFGLRCFMGNLKGSYKSIIGVDDYDSKL GLQSQLLSKVLNQRDMRVHHLGAVKEWLQDQRVLIILDDVDDLEELDVLVRELSWFGLGSRIIVTTEDKKILKAHGIQDI YHVGFPSEKEALEILCLSAFKQRYVQDDFEKVAYRVAYLCGYLPLGLCVVGSSLRGESQEEWELQLSRIENNLDRKIEDV LRVGYDRLSKKDKALFLHIACIFNFGSVDHMTSMLADCNMDVKNGLKTLAIRSLVQLHIMDYEMHSLLQQLGRQVVHEQS DEPGKRQFLVEAEEIRHVLANETGTGSVIGISFDMSKVGKFSISGRAFVGMRNLRFLKMYNSGGLRITGHMKYLPQLRLL HWDSYPRKRLPPTFQPQCLVELCMIFSNLEKLWGGIQSLANLKKIDLTFSSRLKEIPNLSEATNLERLSLGHCSSLVELP SSIRNLHKLKVLWMEGCKKLRVIPTNINLASLENVCMDGCLRLRTFPDISSNIKHLDIRNTKIEDVPAFVAERWLCLDTL YIGSKSVCLSFYKPKSAYITLDDCKCVKSEKDAIRVTSLFYNPMIGIRLFNCFSLDEKTRRVIIQQWDYKFVCLPGKEIT PEFTHRAKGNSITISSGTFSASSRFKACLLLSPPGEVSDPLRIIVCRLISKGVVINELKCYPINPALLSEHLLVFSGALF KEHICCELDATTSEIRFEFNCDYFIECGVQMLAEEGEIKLASSFHDPNREVRFLNCMKLDEEARRAIIQRWAYKYVCLPG KEVPSEFTHKAKGNSVTISQGTLSASTSFRACILLSPTLQHPLWFGYNIDCRLRSKERRCVEVDSDIQFEFSCYEKHSKI IECGVQIMAEEGESSSSREWNKQSDGAVKVSKDENVIKTNNHTSWWSGLKKLGLRKNKKKSDGVKLLD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |