Names & Information
Knowledge of BnaC04G0414200ZS:
| Gene Name | BnaC04G0414200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng11240D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:2973 nt ATGGAAGCTTTGGCATGTGTAGCAAACATTGCTGGAGAGCACTCTCTTAACTGGACTGATGAAGCGGATATGTTGGAAAA GTTTGCCACTGATGTTTCGAACAAACTGAATATTACACTGTCAAGGGACTTTGACGAGATTGTGGGACTGCAAGCTCACT TGAGAAAACTGATCACTTTGTTATGCTTCGAGTGTGATGAAGCAAAGATGATTGGGATTTGGGGTCCTGCGGGAATCGGT AAGTCCACCATTGCTAGAGCTTTATTCAATCACCTTTCTGTCGATTTTGGACTGAGATGCTTTATGGGGAACCTCAAGGG TAGTTATAAGAGCATAATAGGTGTTGATGATTATGATTCCAAGTTGGGTTTGCAAAGCCAACTTCTGTCTAAGGTTTTGA ACCAAAGGGATATGAGGGTACATCATTTAGGTGCTGTAAAAGAATGGCTACAAGATCAAAGAGTGCTTATCATTCTTGAT GATGTAGACGATCTAGAGGAACTAGATGTTTTGGTTAGAGAACTTTCTTGGTTTGGTTTAGGAAGTAGGATCATTGTTAC AACTGAAGACAAAAAGATTTTGAAAGCACATGGGATACAAGATATCTACCATGTGGGTTTTCCATCTGAGAAAGAAGCTC TTGAGATCTTATGTCTATCTGCTTTCAAACAGAGATATGTACAAGATGATTTTGAAAAGGTTGCATATAGAGTAGCATAC CTTTGTGGGTATCTTCCATTAGGCCTTTGTGTTGTGGGTTCATCATTACGTGGGGAGAGCCAGGAAGAGTGGGAGCTTCA GTTATCTAGGATCGAAAATAATCTTGATAGAAAAATCGAAGACGTTTTAAGGGTGGGATATGACAGGTTGTCAAAAAAAG ATAAAGCCCTGTTTCTCCACATCGCATGCATCTTCAACTTTGGTAGCGTTGACCATATGACAAGCATGCTCGCCGATTGT AACATGGATGTCAAAAATGGGCTGAAGACCCTAGCCATCAGATCTCTTGTGCAACTTCATATAATGGATTATGAGATGCA CTCTTTACTCCAACAGTTGGGTAGACAAGTAGTACATGAACAGTCAGATGAGCCTGGAAAACGCCAGTTTTTAGTGGAGG CTGAAGAGATCCGTCATGTATTAGCAAATGAAACGGGCACTGGATCGGTCATAGGTATATCATTTGATATGTCCAAGGTG GGTAAATTCTCTATAAGTGGGCGAGCCTTTGTAGGAATGCGTAATCTTAGATTTTTAAAGATGTATAACTCTGGGGGATT GAGGATAACAGGACACATGAAATATCTACCTCAACTAAGGTTACTACATTGGGATTCATACCCCAGAAAACGTCTTCCTC CAACATTTCAGCCCCAATGTCTTGTTGAGCTCTGTATGATATTCAGCAATCTTGAGAAGCTCTGGGGAGGAATCCAGTCT CTTGCAAATCTCAAGAAGATAGATTTGACCTTCTCCTCTAGGTTGAAAGAAATACCAAATCTTTCAGAGGCTACTAATCT TGAAAGACTATCACTTGGCCATTGCTCAAGTCTGGTGGAGCTTCCCTCGTCTATTAGGAACCTACACAAACTGAAAGTGT TGTGGATGGAAGGCTGCAAAAAGCTACGGGTTATTCCCACCAACATCAATTTAGCATCTCTTGAGAATGTTTGCATGGAT GGTTGCTTGCGATTGAGAACGTTTCCAGATATCTCGAGTAACATCAAACATCTTGATATAAGGAACACAAAGATAGAAGA TGTTCCTGCATTCGTAGCTGAAAGATGGCTTTGTCTTGACACGTTATATATAGGCAGCAAAAGCGTCTGTCTCTCCTTCT ATAAACCAAAATCTGCGTATATTACTCTGGACGACTGCAAGTGTGTTAAATCAGAAAAAGATGCGATAAGAGTAACTTCC CTTTTCTACAACCCAATGATAGGAATCAGGTTGTTCAACTGTTTTTCACTAGATGAAAAAACAAGAAGAGTAATCATTCA ACAATGGGATTACAAATTTGTATGTTTACCAGGCAAAGAAATCACTCCAGAGTTCACTCACAGAGCCAAAGGAAACTCCA TAACCATCTCTTCAGGGACTTTCTCTGCTTCCTCAAGATTTAAGGCTTGCCTCCTGCTTTCTCCACCAGGAGAGGTCTCG GACCCCCTGAGAATCATTGTTTGTCGTCTAATAAGCAAAGGTGTTGTCATCAATGAACTTAAATGCTATCCGATTAATCC TGCACTTCTATCTGAACACCTGTTAGTCTTTTCTGGGGCCCTGTTTAAAGAGCACATATGTTGTGAACTTGACGCTACTA CGAGTGAAATTCGGTTTGAATTCAACTGCGACTATTTTATCGAGTGTGGTGTCCAGATGTTGGCGGAGGAAGGTGAGATA AAACTAGCTTCCTCTTTCCACGATCCTAACAGAGAAGTGAGGTTCCTCAACTGTATGAAACTAGATGAAGAAGCAAGAAG AGCAATCATACAACGATGGGCTTATAAATATGTATGTTTGCCAGGTAAAGAAGTCCCTTCTGAGTTCACTCACAAAGCCA AAGGAAACTCTGTAACCATCTCACAGGGGACTCTATCTGCTTCCACAAGTTTCAGGGCTTGCATCCTGCTTTCACCAACC CTACAACACCCTCTGTGGTTCGGCTATAATATTGATTGTCGTCTAAGAAGCAAAGAACGCAGATGCGTTGAAGTGGACTC GGATATTCAATTTGAATTCAGCTGCTACGAAAAACACTCTAAGATTATTGAGTGCGGCGTACAGATCATGGCGGAGGAAG GTGAAAGTAGTAGCAGCAGAGAATGGAATAAACAGAGTGATGGAGCCGTTAAGGTCTCTAAAGATGAAAATGTCATCAAA ACCAACAACCATACATCTTGGTGGAGTGGGCTTAAAAAGCTTGGTCTGAGAAAGAACAAGAAAAAATCAGACGGGGTGAA ACTTTTAGATTAA |
| AA seq | Len:991 aa MEALACVANIAGEHSLNWTDEADMLEKFATDVSNKLNITLSRDFDEIVGLQAHLRKLITLLCFECDEAKMIGIWGPAGIG KSTIARALFNHLSVDFGLRCFMGNLKGSYKSIIGVDDYDSKLGLQSQLLSKVLNQRDMRVHHLGAVKEWLQDQRVLIILD DVDDLEELDVLVRELSWFGLGSRIIVTTEDKKILKAHGIQDIYHVGFPSEKEALEILCLSAFKQRYVQDDFEKVAYRVAY LCGYLPLGLCVVGSSLRGESQEEWELQLSRIENNLDRKIEDVLRVGYDRLSKKDKALFLHIACIFNFGSVDHMTSMLADC NMDVKNGLKTLAIRSLVQLHIMDYEMHSLLQQLGRQVVHEQSDEPGKRQFLVEAEEIRHVLANETGTGSVIGISFDMSKV GKFSISGRAFVGMRNLRFLKMYNSGGLRITGHMKYLPQLRLLHWDSYPRKRLPPTFQPQCLVELCMIFSNLEKLWGGIQS LANLKKIDLTFSSRLKEIPNLSEATNLERLSLGHCSSLVELPSSIRNLHKLKVLWMEGCKKLRVIPTNINLASLENVCMD GCLRLRTFPDISSNIKHLDIRNTKIEDVPAFVAERWLCLDTLYIGSKSVCLSFYKPKSAYITLDDCKCVKSEKDAIRVTS LFYNPMIGIRLFNCFSLDEKTRRVIIQQWDYKFVCLPGKEITPEFTHRAKGNSITISSGTFSASSRFKACLLLSPPGEVS DPLRIIVCRLISKGVVINELKCYPINPALLSEHLLVFSGALFKEHICCELDATTSEIRFEFNCDYFIECGVQMLAEEGEI KLASSFHDPNREVRFLNCMKLDEEARRAIIQRWAYKYVCLPGKEVPSEFTHKAKGNSVTISQGTLSASTSFRACILLSPT LQHPLWFGYNIDCRLRSKERRCVEVDSDIQFEFSCYEKHSKIIECGVQIMAEEGESSSSREWNKQSDGAVKVSKDENVIK TNNHTSWWSGLKKLGLRKNKKKSDGVKLLD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |