Names & Information
Knowledge of BnaC04G0416700ZS:
| Gene Name | BnaC04G0416700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaUnng00480D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3183 nt ATGGCTTCTTCTGCTCTGAGTTACCCAAGGAGATACCATGTCTTCCCTAGCTTCCATGGCCAAGATGTTCGTCGACCATT TCTCAGTCATTTACACAGAGAATTTGAGAGGAAGGGGATTGTGTCATTTAAAGATCAGGAGATCGAAAGAGGCCACACGA TCGGACTTGATCTCGTACAAGCGATTAGAGAATCGAGGGTCTCCATCGTTGTGCTCTCCAAGAACTATGCTTCATCGGGA TGGTGCTTAGATGAGCTGGTGGAAATCTTGAAGTGTAAAGAAGATCAAGGCCAGGTTGTGATGACTATCTTTTATGACGT TGACCCGTCTGATGTTCGAAAACAGAGCGGCAATTTTGGAAGTGCTTTCGAAACAACTTGTCAAGGAAAAACAGAGGAAG TGAAGCACAGATGGACCAAGGCTTTGACTAATGTTGCAGAAATAGCCGGAGAACACTATCTTAACTGGGACGATGAAGGG GAGATGGTCGGAAAGATTGCCGCAGATGTTTCCAAAAAACTTAATCTCACACTCTCAAGAGATTTTGAGGGCATGGTTGG AATGGAATCTCACTTAATGAAATTAGACTCTTTGTTGTGCCTAGAGTGCGATGAAGTGAAGATGATTGGAGTTTGGGGTC CTGCGGGAATTGGTAAGACCACCATTGCTAGAGCTTTATACAACAAACTCTCTAGCAATTTCCTACTTAGTTGTTTTATG GGTAACCTCGAGGGAGGTCTTAAGAGGAGCATAAGGGGTGTTGATGACTATGATTCCAAGTTGTGTTTGCAAAGCGAATT TCTGTCCAAGATTTTGAACCAAAAAGATATGAAGATACGGCATTTAGGTGCAGTAAAAGAATGGCTGCAAGACCAAAAAG TGCTTATAGTTCTTGATGGTGTAGATGATCTAGAGCAATTAGTGGTTTTGGCTAACGAGCCTAACTGGTTTGGTTCCGGA AGTCGGATCATTGTTACTACAGAGGATAAAAAGATTTTGAAGGCACATGGTATTAATGTTATCTACACTGTTGATTTTCC ATACGAAGAAGAAGCTCTTGAAATCTTCTGCCTATCTGCTTTCAAAAAAACTTCCCCACAAGCTGGTTTTGAAAAGCTTG CAAAGAAAGCAGCAAAGATTTGCGGTAATCTCCCGTTAGGCCTTTGTGTTGTAGGTTCATCTTTGCGTGGTGAGACCAAA TCCGAGTGGGAGCTTCAGTTATCTGGGCTTGAAAATAGTCTTGATAGCAAAATTGAGGACGTACTAAGAGTGGGATATGA CAAATTGTCGAAGAAACACCAAGCTATATTTCTCCACATAGCATGCTTCTTCAACAATGAGGATGCTGACCATGTGGCGA CCATGCTCTCTGACAGTAATTTGGATGTCAGAAATGGGTTGAAGATCCTAGCGGATAAATCTCTAGTGTATGTTTCTACT GATGGGAAGATAGTGATGCATTATCTACTCCAACAATTCGGTAGACTGGAAGTTGTAAAACAGTCTAATGAGCCGGGGAA ACGTCAATTTCTAGTAGAAGCTCAAGACATTCTCAATGTACTGGCAAATGGAACAGGTACTGAATCTGTCGTGGGCATAT CTTTTGATATGCCCAAGACCGAGGAGTTGTTTATAAGTCGTAGAGCCTTTGAAAGAATGTGTAATCTCCAATTTTTAAGA GTTTACATGGGCCATTCCAATGAAAATGTAAGCTTGTGCACACTAGAGGGCATGGATTATCTACCTCGTCTAGAAGACAT GGAGTTTCTACCTCGTCTAAGGTTATTACATTGGAATTCATACCCAGGAACAAGTCTTCCTCCAACATTTCGGCCTGAAT TTCTCATCGAGCTCAACATGCCATCAAGCAAATTTGAGAAGCTATGGGGAGGAATCCAGCCCCTTGTAAACCTGAAGAAG GTAAATCTGAACTTTTGTTCCAACTTGAAAGAGATACCAAATCTTTCCAGAGCTACTAATCTTGAGACTCTGACATTCAT CCAATGCACGAGTTTGATGAAGTTTCCGTCGTCTATTATGAATCTATACAAACTAAAAACGGTGAGGATGTGGGGTTGCA ATAAGCTACAAGTTGTTCCAACCAACACAAGCTCAACATCTCTTGGGAGATATTCCTCACGAATGAGAACTTTTCCAGAT ATTACTAGGAAAATCGAGAATTTTTGGGTTGGTCCATCATTCGTTGGTCGTCGTTGTCATGGCCAAATGCTTGATGTAGT TGGCAGAGAACCCAAGAGATTAACACATCTTCCAGAAAGTGTGAGGAAGCTAGACCTAAGCGATAGTGGCATAGAGAGGA TTCCAGACTATGTCAGCGGTCTCCATCGGTTACAAACTCTTATCGTCGAAAACTGTAGAAAACTCATGTCCGTGGAGAAT CTCCCCAGTTCCCTCAAGTCCCTACAAGCAAACAATTGTGTTTCACTTGAGAGAGTCGAATTGTCAATGTTACTACAAGA TTCAGATTCAATCAGGGAACTCATGTTCCATAATTGCTTAAGACTCGATAAAGAAGCAAGAAGAGTAATCTTAAATCGAA GGTATTCCGAGTATGTATGCTTACCAGGTAAACAAGTCCCCGCTGAGTTCACTCACAAAGCTGCAGCAAACTCCATAACC ATCTCTCCGGGGAACTTTTCCACTGCTTCTTCAAGATTTCAGGTTTGCTTCCTGCTATCACCAATCAAGGCCAACGCACT TGTGAATGTAACTTGTTATCTAAGAAACAAAGAAGGTGTCCTCATTAACCAAGTCAACTATGTGACGAAATTGAGTTCAG GCGAGTCTCTTCAAGCTGGAAACCGGCATCTCTTTGTACTTGGTGGTGACTTGTCACGCCAACAAAATAAAAGCCCTGAA GTGGATGTGAATACAAGCGAGATTCTCTTTGAATTCAACTGCTCAGACAACCACAAAATTATTGAGTGTGGTGTACGGCT CTGGGAGGAGGAAGTCAAGAAACCTAATATCACTGAACGGTTCTGCTATAAAATCGGAGACCACGATAATGATGGAGACT GTGAACCTGAAGCTAAAAGCAACATTAGGTACCAAACAGCAGATAAAGCTGCAGCTGTGGAGGCCTCTCAAGTTGAAATC ACCAAACACACAGGTCGATGGAGTTCCACTTTCCTTAAGAAGTTTGGTTTAAGGAAGATTTGA |
| AA seq | Len:1061 aa MASSALSYPRRYHVFPSFHGQDVRRPFLSHLHREFERKGIVSFKDQEIERGHTIGLDLVQAIRESRVSIVVLSKNYASSG WCLDELVEILKCKEDQGQVVMTIFYDVDPSDVRKQSGNFGSAFETTCQGKTEEVKHRWTKALTNVAEIAGEHYLNWDDEG EMVGKIAADVSKKLNLTLSRDFEGMVGMESHLMKLDSLLCLECDEVKMIGVWGPAGIGKTTIARALYNKLSSNFLLSCFM GNLEGGLKRSIRGVDDYDSKLCLQSEFLSKILNQKDMKIRHLGAVKEWLQDQKVLIVLDGVDDLEQLVVLANEPNWFGSG SRIIVTTEDKKILKAHGINVIYTVDFPYEEEALEIFCLSAFKKTSPQAGFEKLAKKAAKICGNLPLGLCVVGSSLRGETK SEWELQLSGLENSLDSKIEDVLRVGYDKLSKKHQAIFLHIACFFNNEDADHVATMLSDSNLDVRNGLKILADKSLVYVST DGKIVMHYLLQQFGRLEVVKQSNEPGKRQFLVEAQDILNVLANGTGTESVVGISFDMPKTEELFISRRAFERMCNLQFLR VYMGHSNENVSLCTLEGMDYLPRLEDMEFLPRLRLLHWNSYPGTSLPPTFRPEFLIELNMPSSKFEKLWGGIQPLVNLKK VNLNFCSNLKEIPNLSRATNLETLTFIQCTSLMKFPSSIMNLYKLKTVRMWGCNKLQVVPTNTSSTSLGRYSSRMRTFPD ITRKIENFWVGPSFVGRRCHGQMLDVVGREPKRLTHLPESVRKLDLSDSGIERIPDYVSGLHRLQTLIVENCRKLMSVEN LPSSLKSLQANNCVSLERVELSMLLQDSDSIRELMFHNCLRLDKEARRVILNRRYSEYVCLPGKQVPAEFTHKAAANSIT ISPGNFSTASSRFQVCFLLSPIKANALVNVTCYLRNKEGVLINQVNYVTKLSSGESLQAGNRHLFVLGGDLSRQQNKSPE VDVNTSEILFEFNCSDNHKIIECGVRLWEEEVKKPNITERFCYKIGDHDNDGDCEPEAKSNIRYQTADKAAAVEASQVEI TKHTGRWSSTFLKKFGLRKI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |