Names & Information
Knowledge of BnaC05G0132700ZS:
| Gene Name | BnaC05G0132700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC05g12130D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=3 SV=2 |
| NT seq | Len:4884 nt ATGGGAAACTGTGTATCGCTAGACATATCGTGTGATCAAACGTTGAATCACGCTTGTGGCTGCTTATTCGGTGATGGAAA CTACATTCACAAAATGGAAGCAAACCTCAAGGCTCTGGAGAAAGCTATGCAAGAACTTGAAGAGAGACGAGATGATCTGC TAAGAAGAGTTGTCATAGAAGAAGATAAAGGTCTGCAACGGCTTTCTCAAGTCCAAGGATGGTTTTCAAGGAAGTGCATA ACAAGCTGCAACTACGGTAAAAAAGTTTTGAACATGTTAAAAGAAGTTGAAGGTCTTCTAGCTAAAGGAGTTTTTGAAGT GGTGGCTGAAAAAGTTCCTGTACCGAAGGTGGAGAAGAAGCATATCCAAACCACAGTTGGTTTGGACTCAATGGTGGAAA AGGCATGGAACAGACTCATGAAAGATGACAAAAGAACTTTGGGTCTTTACGGTATGGGGGGAGTGGGCAAAACTACACTC TTGGCTTGTATCAACAACAGATTCTTTCAAGTGGTTAATGGATTCGATGTTGTGATGTGGGTTGTGGTTTCTAAAGATTT GCAAAATGAAAGTGTTCAGGAGCAGATCTTGAGAAGGTTGTGCCTTGACAAGGAATGGAAACAAGAAACTGAGAATGAGA GAGCCTCTCGCATAAAGACTATTCTAAACCGAAAGAAGTTTGTTCTGCTGTTGGATGATTTATGGAGTGAGATAGATTTG AACAAGGTGGGAGTTCCACCACCAACCGGAGAAAATGGATCCAAGTTAGTTTTCACCACCCGTTCAAAGGAAGTTTGCAA AGACATGGAGATCGATGATATGATGGAAGTTGTTTGTTTGTCAAAGAATGAAGCATGGGAGCTGTTTCAACAGAAAGTTG GAGACAATCCTATAAAGAGCCATCACGATGTTCTTCCACTCGCAAGAAAAATTGCTGAGAAATATTGTGGCTTGCCACTT GCACTATGCGTCATTGGCAAAGCCATGGCAAGTAAAGAGACTGTACAAGAATGGCATCATGCTATCAACGTTCTTAACTC GTCCAGCCACGAGTTTCCAGGGATGGAAGAGAAGATTCTTGCTATTTTGAAGTTCAGTTATGATAGTTTAAAGGATGAGA AAGTCAAAATGTGCTTCCTATATTGTTCTTTGTTCCCGGAAGATTATGAAATAGGGAAGGAGAAGTTGATAGGTTACTGG ATTCACGAAGGGTTTCTTGATGAAAACAGAAACGAAGATGGAGCTAAGAATCAAGGTTATGATATAATTGGTTCCTTAGT TCATTCCCATCTACTGATGCATGGTGTCCTCACATTGACTGTGAAAATGCATGATGTGATACGCGAGATGGCTCTGTGGA TAGCATCTAAGTCTAAAGAAACTTTTTGTGCTAGACCTGGTGCGCATTTAGGCCATATACCAAAAGACATCAAGTGGGAG CTTGTGAGAAAGATGTCTTTAATGAGCAACCAGATTGCAGAGATATCTTGCTGTGCCAAGTGCCCCAAGCTCTCAACCTT GTTACTCCAGAATAATAAGTTGGTGGAGATTTCAGATCTTTCGAGGAACTTTAGTCTTTCTGGATTACCAGAAGAGATTT CCAACTTAGGTTCCTTGCAATATCTAAACTTATCATACACAGGACTCAAATCGTTACCAGATGGTTTGAAGAAGCTGAGG CGACTAATCGAGTTGAACCTGGAGTTCACTCGTGAACTTGAGAGTGTTTCCGGGATAGCAACAAGTGTTCCAAATCTTCA AGTGTTGAAACTGTTTTGCTCGAGAGTTTGCGTTGATGACATATTAATGAAAGAGATACAACTCTTGGAGCACTTGAGGA TTTTAACAGCAACGGTAGAAGATGTCATGATTCTGAGAAGCATACAAGAAGTGGACAGGGTTATTAGAAGCTTATGTCTC AGCAATATGTCAGCACCAGTTGTGGTATTAAACACTATAGCTCTGGGACGTCTTGAACGGTTTACAATATGGAACTCCAA AATCTCTGAGATAAAGATAGAATGTGAAAGCAATGGGACTCTTCAGTGTCCAAATTCTCCAGGCTTCAAGCAGCTTTCGG CTGTACATGTAGTCCGTTTAGAAGGTCCAAGGGATTTGACATGGGTAATGTTTGCTCAAAGTCTCAAGGTTCTATCTGTG TCAGGTCCATCAAGTATAGAAGAGATACTGAATAGAGAGAAAGGAATGAGTATTATCAATGCGCATCCAAATATTGTGGT GGTTCCTTTCGAAAAGCTTGAACTACTTAGAGCGAGTGATTTGGATGAACTGAGGTCAATCTGCTGGAGTCCTCTGGATG TTCCAAACCTGAGACAGTTTTACTCCCAAGGCTGTCCAAACCTTCCCGAAGCTAACACCGAGTGTTTCAGACATGCAAAA AAGATGGAGACGACGCTGTTTAATGACGGTGGAGAAGACCCTTGGCTTGCTCCAGACAAATTCTACCATGTAATATTCTG CTTCACCATCTCTCTCCTCTTCTCAACTCTCGCTTCTCTCTCCCGCTACTCCTTCCTACGGCGTCACTCCATCTGGATCG GATCTGCGTTCTCACTCGCCGCCGGTGCGGCTAAAGAAGCTGCCGATCAGTTCGGTATCTTCCCTTCCGCAGGTGCCTCC GCGAGAGACGCCGTCGCGGACTCCGTTGGAGTGGTCATCGCTGCTTTGCTTCTCTTCCTTTGGAAATCTCGAAGATCACG TCCGGATCCGGATAAAATCTCTTTGTTCATCCTCGAGATTATCGACAAGCACAGAACTGCTCAAACTGTTATCGGTTCTG GTGAACAATCACCGCTTTTTCCTATTGGCGCATTTGCTCATAAATCTCTCGTCGGATTCCTCGCTTCTCACTCTCCTCTC CTCCTCGCTTCTTCGCCGACTCAAGTAAAGATGGCTGTTTCATCTGATGAAGAGTCCGAGATCAGCGAGTCAGAGATCGA CGACTACTCCGAAACGCCTTACCTGCTCCTCCAGAACGGGAAGTACAAGGTTAAAGTGAACGGGACGCTGAGATGCCCCT TTTGCTCAAACAAGAAAAAGCAAGACTACAAATACAAGGAGCTGATGGCGCATGCCTCCGGAGTCTCCAAAGGATCCGCC AGCAGAAGCGCTAAGCAGAAGGCTAACCATCTCGCATTGGCAAGGTACTTACAGAACGAGCTCGCCGGCGATGCTGAGCC GCTTCCACGACCTCCTCCTGTTCCTCCTCAGTTGAACGAGTCAGAAGCCAAACCGGGTGAGGTTTACGTCTGGCCGTGGA TGGGGATTATCATTAGCCCTTTGAACGAGACTGATGACAAGGAGGCTCTTCTTGATCCTGCTTGTTGGTTGAAGGAGCTT TCTAGGTTCAAGCCTGTTGAGGTGCACGCCTTTTGGGTCGAGCAAGGTTTGACCGTTGGGGTTGTTGCTAAGTTCAACAG CGACTGGAGCGGGTTTGCTAGCGCGACGGAGCTTGAGAAGGAGTTTGAGAGTATAGGCTGCAGCAAAAAGGAGTGGATGG AGAAGAGAGGAGGAGATTCAGTGTCCAAAAAAGCCTATGGTTGGTGTGCACGTGCAGAGGACTATCACTCCGAAGGGCCC ATTGGTGAATACCTCTCCAAGGAGGGGAAGCTGAGAACGGTTTCAGATATCTCTCAAGAAAAGGCGCAGGATAGGAACAG CGTTCTTGAACAGCTTTCGGATATCATTGCTATGACGAATGAAGATCTCAACAAGGTTCAGTACAGTTACAACAAGACGG CGATGTCACTGAAGAGGGTCCTTGACGAAAAGAAAACCTTGCACGAGGCTTATGCTAATGAAACGAAGAAGATGCAGCAG ATGTCGATTCTCAGCATCCAGAAGATCCTTAACGATAAAGAGAGGCTAAGCAATGAGCTCGAGAAGAAGATGCAGAAACT TTCGGAGTGGTCCAAGGCGTTGGACAAAAAGGAAGCACTAACTGAACTGGAGAGGCAAAAGCTTGATGAAGAGAAGAAAA AGAATGATGCTATGAACATTTCCCTCCAGTTAGCGTCCCATGAGCAGAAAAAGGCTGACGAGAGCGTTTTGAGACTTGTG GAAGAGCATAAGAGGCAAAAGGAAGAGGCTTTGAGCAAGATCCTTCAGCTTGAGACGCAGCTAGACACCAAACAGACACT GGAAATGGAGATTCAAGAGCTGAAAGGCAAACTACAAGTGATGAAACATTTGGGGGATGATGATGACGAGGCGGTCAAGC AGAAAATGAAGGAGATGAATGATGAGCTGGAGGATAAGAAGTCTGAGTTAGAAGGACTAGAGCAGATGAACTCAGCACTG ATGACAAAAGAACGTCAAAGCAATGATGAGATACAAGCAGCACGGAAAAAACTAATTGCGGGTTTGACAGGATTGTTGGG TGCCGAAACTGATATCGGGGTCAAGAGGATGGGAGAACTTGATGAGAAGCCGTTCCTGAATGTTTGCAAGAAGAGATTTT CGGAGGATGAAGCTACGGTTGAAGCTGCCACCCTTTGCTCTACATGGCAAGAGAACCTCAAGGATTCGTCATGGCAACCG TTCAAACGTGAAGGAACCGGGGACAAAGCAAAGGCATGTTCTCTATCCCACTGTCTTCTCCCACTTTCTGAGTTAAATAT GTTGGAGAAACCAGAAGTGGTGGACGAAGATGATGAGCAGCTTAAGAAGCTTAAAGGAGAGTGGGGAGAAGAGGTGCATA ACGCTGTTAAAACAGCTCTCGAGGAGATGAATGAGTATAATGCCAGTGGTCGATACACCACCTCAGAACTTTGGAATTTC AAAGTAGGAAGGAAAGCAACTTTAAAGGAAGTGATTAATTTCATCTCCAACGACATCAAAACTGTGAAACGCAAAAGAAC CTGA |
| AA seq | Len:1628 aa MGNCVSLDISCDQTLNHACGCLFGDGNYIHKMEANLKALEKAMQELEERRDDLLRRVVIEEDKGLQRLSQVQGWFSRKCI TSCNYGKKVLNMLKEVEGLLAKGVFEVVAEKVPVPKVEKKHIQTTVGLDSMVEKAWNRLMKDDKRTLGLYGMGGVGKTTL LACINNRFFQVVNGFDVVMWVVVSKDLQNESVQEQILRRLCLDKEWKQETENERASRIKTILNRKKFVLLLDDLWSEIDL NKVGVPPPTGENGSKLVFTTRSKEVCKDMEIDDMMEVVCLSKNEAWELFQQKVGDNPIKSHHDVLPLARKIAEKYCGLPL ALCVIGKAMASKETVQEWHHAINVLNSSSHEFPGMEEKILAILKFSYDSLKDEKVKMCFLYCSLFPEDYEIGKEKLIGYW IHEGFLDENRNEDGAKNQGYDIIGSLVHSHLLMHGVLTLTVKMHDVIREMALWIASKSKETFCARPGAHLGHIPKDIKWE LVRKMSLMSNQIAEISCCAKCPKLSTLLLQNNKLVEISDLSRNFSLSGLPEEISNLGSLQYLNLSYTGLKSLPDGLKKLR RLIELNLEFTRELESVSGIATSVPNLQVLKLFCSRVCVDDILMKEIQLLEHLRILTATVEDVMILRSIQEVDRVIRSLCL SNMSAPVVVLNTIALGRLERFTIWNSKISEIKIECESNGTLQCPNSPGFKQLSAVHVVRLEGPRDLTWVMFAQSLKVLSV SGPSSIEEILNREKGMSIINAHPNIVVVPFEKLELLRASDLDELRSICWSPLDVPNLRQFYSQGCPNLPEANTECFRHAK KMETTLFNDGGEDPWLAPDKFYHVIFCFTISLLFSTLASLSRYSFLRRHSIWIGSAFSLAAGAAKEAADQFGIFPSAGAS ARDAVADSVGVVIAALLLFLWKSRRSRPDPDKISLFILEIIDKHRTAQTVIGSGEQSPLFPIGAFAHKSLVGFLASHSPL LLASSPTQVKMAVSSDEESEISESEIDDYSETPYLLLQNGKYKVKVNGTLRCPFCSNKKKQDYKYKELMAHASGVSKGSA SRSAKQKANHLALARYLQNELAGDAEPLPRPPPVPPQLNESEAKPGEVYVWPWMGIIISPLNETDDKEALLDPACWLKEL SRFKPVEVHAFWVEQGLTVGVVAKFNSDWSGFASATELEKEFESIGCSKKEWMEKRGGDSVSKKAYGWCARAEDYHSEGP IGEYLSKEGKLRTVSDISQEKAQDRNSVLEQLSDIIAMTNEDLNKVQYSYNKTAMSLKRVLDEKKTLHEAYANETKKMQQ MSILSIQKILNDKERLSNELEKKMQKLSEWSKALDKKEALTELERQKLDEEKKKNDAMNISLQLASHEQKKADESVLRLV EEHKRQKEEALSKILQLETQLDTKQTLEMEIQELKGKLQVMKHLGDDDDEAVKQKMKEMNDELEDKKSELEGLEQMNSAL MTKERQSNDEIQAARKKLIAGLTGLLGAETDIGVKRMGELDEKPFLNVCKKRFSEDEATVEAATLCSTWQENLKDSSWQP FKREGTGDKAKACSLSHCLLPLSELNMLEKPEVVDEDDEQLKKLKGEWGEEVHNAVKTALEEMNEYNASGRYTTSELWNF KVGRKATLKEVINFISNDIKTVKRKRT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | XS zinc finger domain |
| KEGG | probable disease resistance protein At1g15890; K13459 disease resistance protein RPS2 (A) |