Names & Information
Knowledge of BnaC05G0205300GG:
| Gene Name | BnaC05G0205300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g29600D [Brassica napus] |
| Best Hit (SwissProt) | TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1 |
| NT seq | Len:3918 nt ATGATGAAGACCGGAGCTGTTTCTGATCCTCGTTCGAGGCTCAAGTGGGACATATTCCTCAGTTTCCAAAGAGACAGAAA CCACAGTTTCACGGATCGTCTCTATGAAGCGCTCATCAAGGCACATGTCCGGGTAAGGAACGGTGACGTGGGACGCAAGG ATCAGAAGCTGGGTGTCAATGAAATGGATCAAGATTCAGTGGCTTTCATTGTCATCTTATCCCCTGACTATGCCAAGTCT CGCTGGTGCCTTGATGAATTAGCCAAGCTCTGCGATCTGAGAGCATCACTGGGTCGTCCTATATTACCAATCTTTTACGA GGTTGATCCATGGCACTTTCGGAAACAGAGTCCTTTCGAAAAAGGCTTTGAAGAGCACGCAAAAAGATTCCGCGAGGAGG AGATAGAAAGATGGAGGGGAGCTATGAATGTAATCGGACATATCTCCAGCTATGTTTACAGGTACATGAGGACTCCCTTG ATCGGAGATATGGAGACCGAAGTTATCACCAAACCGCACAGACTCAAGTTCGACGTCTTCCTCAGCTTCCGAGGCGAAGA CACGCGCCACACCATCACCGAGCGCGTCTACGACGCTCTCCACCGAAAAGAGAAAGTCCGCGTCTTTCGCGACGACGAAG GTATGCAACGAGGCGACGAGATCAATCCAAGCCTCGTCGCAGCCATGGAAGACTCTGCAGCCTCCGTCGTCGTTTTATCC CCTCGCTACGCTGACTCGCACTGGTGCCTAGACGAGCTAGCTACCCTCTGCGATCTGCGAGCGTCTCTGAAACGCCCGAT GATACCCATCTTCTATGAGGTTGATCCTTCGCATGTCCGTAAACAGAACGATCATTTCGCTAAGGACTTTGAAGCACATG CTAAAAGGTTTAAGGAGGAGAAGATACAGCGGTGGAGAAAGGCTATGACTTTGGTCGGAAACCTCTCGGGATTTGTTTGC AAAGAAGACTCTGTTGATGATGAGATGATAGGTCTTTTGGTGAAGAGAGTTTTATCCGAAGTGAGCAATACGCCAGAGAA CGTTGGAGAATACACAGTTGGTTTGGAGCCACGTGTCGACTACTTGATGAATCTGGTCGATGTTAAATCCACCTCTGACG TTCAAATCCTGGGGCTTCACGGTATGGGTGGTATTGGGAAGACGACCCTTGCAAAAGCCTTTTATAACACGATCGTTGCA GACTTCGAGCATAGAGTTTTCATCTCAAACGTTAGAGAAAGATCATCAGACCATGACGGCTTACTCAATCTACAAAAGAG TTTGATCAAGGGGCTTCTCCGTTCGCAACCTGAAATAGAAGATGTTAACCGAGGGAGAGACAAGATAAGAGAGAGCGTTT ATGAGAAGAAGATTCTTGTGGTTTTAGATGATGTTGATAAGGTAGACCAAGTTGATGCGCTGGTTGGTGAAAGAAGTTGG TATAGTGAAGGAAGTCTTATAGTCATCACTACAAGAGATGAAGATATTCTGAGTAAGGTCTTAGTGAAGCAAAAGTATGA AGTCAGGTGCTTGAATGAGGGGCAGGCCTTGAAGCTGTTTAGTTATCATTCACTGAGGAAAGAAAAACCAACAGAGAGTT TACTAGAGCTGTCCAAGAAGATTGTCAAGATATCAGGACTATTACCACTAGCACTTGAAGTGTTTGGATCTCTTTTGTAT GACAAGAAGGAGGCAAAAGAATGGCGAACTCAGCTAGAGAAGCTCAAAAACACTCAACCAGGCAATCTTCAGGATGTTCT GAAGCTGAGTTTTGATTCTTTAGACGATGAAGAGAAGAATGTGTTCCTGGATATTGCTTGTCTCTTTCTTAAAATGCAGA TAACGAAAGAAGAAATCGTCGACGTACTGAATGGTTGTGGGTTTAACGCCGAGGCTGCTCTCAGTGTCCTCAGACAGAAG TCTCTTGTTAAGTTCTTGTCAGACGAGAATCTTTGGATGCATGATCAGATTCGAGACATGGGAAGGCAGTTAGACCTTAA AGAAACCCCTGGGGATGCTAGAATGCGGAGTAGACTCTGGGACCGTGCTGAAATCATGACTGTATTGAACAATATGAAGG GAACATCATCCATCCAAGGAATTGTACTTGACTTTAAAAAGAAGTTAGCAACGGATCCAAATGCAGAGAACATTGCGTTG GGGAATCTACATGACAATCCAGGCATCAGAGCTGTGTTTAGTTACCTGAAGAATAAGTTTGTAGGATTTCCAGCAGAGGA AAAGCCAAAAAGCTCTGAGATCACCATTCCTGTAGAGCCTTTTGTACCAATGACAAAGTTGAGACTCCTTCAGATTAATC ATGTGGAGCTGGCAGGGAATCTTGAACGTCTTCCATCTGAACTCAAGTGGATACAGTGGAGAGGCTGTCCATTAAAGGAG GTACCACTGAATCTTCTTGCTCGGCAACTTGCTGTTCTTGATCTTGCAGAGAGTGCAATAAGACGCATCCAGAGTTTGCA CATCGAAGGGGTGGATAGAAACTTGAAGGTTGTAAACTTGCGTGGTTGTCACAGCTTAGAAGCCGTTCCTGATTTATCAA ACCATAAGTCCTTAGAGAAGCTTGTCTTTGAACGATGCATGCGTCTGGTGGAAGTTCCAAGTTCAGTTGGTAATTTGGGA ACATTACTTCACCTGGATTTCAGAAACTGTCCAAACCTCACTGAGTTTCTTATGGATGTTTCTGGACTGAAGAGTCTTGA AAAGCTTTACCTCTCTGGCTGTTCAAATCTGAGTGTCTTACCAGAAAACATTGGTTTCATGCCATGTTTGAAAGAGCTTT TCCTTGATGAAACAGGGATAAAGGAGTTACCAGGCTCTATTTTTCGCCTCGAAAATCTTCAAAAGCTTAGCCTAAAGAGC TGCAGATCTATTCAAGAGCTTCCTATGTGCATAGGAACATTGACATCACTGGAAGAACTAGATCTGAGTAGCACTTCACT GCAAAATCTTCCGAGTTCTATTGGAAATTTAAAAAATCTCCAGAAGCTGAGTTTGATGCACTGTGCATCCCTTTCTAAGA TACCTGACACTATTAAGGAGCTCAAATCATTGAAGAAACTATTCATCTACGGAAGTGCAGTGGAGGAGCTGCCTCTAAGC GTAGGCTCACTGCCATGTTTGACTGACTTTTCAGCAGGAGGATGTAAACTTCTGAAGCATGTTCCAAGTTCCATCGGTGG ATTAAACTCTCTTCTCGAACTTGAGTTGGATTGGACACCAATTGAGACTCTACCAGCAGAGATTGGTGACTTGCACTTTA TTCAAAAACTTGGGTTGAGGAACTGCAAGTCTCTGAAGGTTTTGCCCGAATCAATAGGAAACATGGACACACTCCATAGC TTGTTCCTTGCAGGCTCTAACATTGAGAAACTGCCTGAAACTTTTGGCAAGCTTGAAAACCTAGTCTCACTCCGAATGAA CAACTGTAAAATGATCAAGAGGCTTCCTGAATCATTTGGAGACTTGAAATCGCTTCACAGTCTGTACATGAAGGAAACTT CGGTGGTAGAGCTGCCAGAAAGTTTTGGAAACCTCTCGAATCTAAAGGTATTGAAGATACTGAAGAAGCCTCTCTTTAGA AGTTCTCCAGGTACAAGTGAAGAACCTACTTTTGTTGAAGTACCAAACTCTTTCTCAAACCTCTTGTCACTTGAGGAGAT AGATGCTAGAGGTTGGGGGATATGGGATGGGTACACCATACAAGTCGTTAAACGGGAACCACCAATCAAACAAGGCGTTG AGCTAAAGATGCATGGGATTCATTTTGTTTATGAAGGGGATGATGATTTTAAAGGTCGTTTGAAGAAGGTGAAGCCAGCT CAGAAAGTGAATCTGCTTATACTCACAACAGATGGTTCAGTACTTCAGTCTCTCTCTTACTGTTATGGGTGGTGTTGA |
| AA seq | Len:1306 aa MMKTGAVSDPRSRLKWDIFLSFQRDRNHSFTDRLYEALIKAHVRVRNGDVGRKDQKLGVNEMDQDSVAFIVILSPDYAKS RWCLDELAKLCDLRASLGRPILPIFYEVDPWHFRKQSPFEKGFEEHAKRFREEEIERWRGAMNVIGHISSYVYRYMRTPL IGDMETEVITKPHRLKFDVFLSFRGEDTRHTITERVYDALHRKEKVRVFRDDEGMQRGDEINPSLVAAMEDSAASVVVLS PRYADSHWCLDELATLCDLRASLKRPMIPIFYEVDPSHVRKQNDHFAKDFEAHAKRFKEEKIQRWRKAMTLVGNLSGFVC KEDSVDDEMIGLLVKRVLSEVSNTPENVGEYTVGLEPRVDYLMNLVDVKSTSDVQILGLHGMGGIGKTTLAKAFYNTIVA DFEHRVFISNVRERSSDHDGLLNLQKSLIKGLLRSQPEIEDVNRGRDKIRESVYEKKILVVLDDVDKVDQVDALVGERSW YSEGSLIVITTRDEDILSKVLVKQKYEVRCLNEGQALKLFSYHSLRKEKPTESLLELSKKIVKISGLLPLALEVFGSLLY DKKEAKEWRTQLEKLKNTQPGNLQDVLKLSFDSLDDEEKNVFLDIACLFLKMQITKEEIVDVLNGCGFNAEAALSVLRQK SLVKFLSDENLWMHDQIRDMGRQLDLKETPGDARMRSRLWDRAEIMTVLNNMKGTSSIQGIVLDFKKKLATDPNAENIAL GNLHDNPGIRAVFSYLKNKFVGFPAEEKPKSSEITIPVEPFVPMTKLRLLQINHVELAGNLERLPSELKWIQWRGCPLKE VPLNLLARQLAVLDLAESAIRRIQSLHIEGVDRNLKVVNLRGCHSLEAVPDLSNHKSLEKLVFERCMRLVEVPSSVGNLG TLLHLDFRNCPNLTEFLMDVSGLKSLEKLYLSGCSNLSVLPENIGFMPCLKELFLDETGIKELPGSIFRLENLQKLSLKS CRSIQELPMCIGTLTSLEELDLSSTSLQNLPSSIGNLKNLQKLSLMHCASLSKIPDTIKELKSLKKLFIYGSAVEELPLS VGSLPCLTDFSAGGCKLLKHVPSSIGGLNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKSLKVLPESIGNMDTLHS LFLAGSNIEKLPETFGKLENLVSLRMNNCKMIKRLPESFGDLKSLHSLYMKETSVVELPESFGNLSNLKVLKILKKPLFR SSPGTSEEPTFVEVPNSFSNLLSLEEIDARGWGIWDGYTIQVVKREPPIKQGVELKMHGIHFVYEGDDDFKGRLKKVKPA QKVNLLILTTDGSVLQSLSYCYGWC* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | leucine-rich repeat-containing protein, putative; K19613 leucine-rich repeat protein SHOC2 (A) |