Names & Information
Knowledge of BnaC05G0457100ZS:
| Gene Name | BnaC05G0457100ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance RPP13-like protein 1 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1 |
| NT seq | Len:3063 nt ATGATTGTAGGAGAGATGGTTCTCTCGGCTTTTTTACAAGCTCTCTTCCAGACACTGATGTCCGGTCCTTTCAAGTCCTT CTTCAAGAGGCGAGAACTGAACGAGTGTGTACTAGAGAGGCTCAACATTGCTTTGTTGACAATAAGTGCGGTGCTGATTG ATGCGGAGGAGAAACAGATTACAAACCCGTCGGTGGAAAAATGGGTCAACGAGCTGAGAGATGTTGTTTACCATGCTGAG GATGCTCTTGATGATATTGCTACAGAAGCTCTGCGTCTCAACATAGGAGCTGAATCTTCTTCCAATAGGCTGAGACAGCT TCGTGTCAGAACCCTGGGAGATTTTTTGGAAAGGAACAGTGATCATTTGGAGACCAGGCTCGAGAAGGTCACGATGAGGC TCGAGCGTTTAGCCTCGCAAAGAAATATCTTGGGTTTGAAAGAGATAACTGCAATGACACCCAAACAAAGGTTGCCAACT ACATCTCTTGTGGATGAATCTGAAGTGGTTGGTAGAGATGATGATAAAGATGAGATCATGAGATTCTTGATTCCTGAGAA CGGGGAGGATAGTGGGACAACCGTTGTAGCTATTGTTGGAATTGGTGGGGTTGGCAAAACTACACTTTCACAACTCCTAT ACAATGATCATCGTGTTCAGAATCATTTTGGAACTAGGGTCTGGGCTCATGTCTCAGAGGAGTTTGACGTTTTCACGATC ACCAAAAAGGTTTATGAATCCGTTACTTCCCGGCCTTGCGAGTTCACCGACCTGGATGTACTTCAAGTTAAATTGAAGGA GAGGTTAATAGGACCGTTTCTGCTTGTTCTAGATGATCTGTGGAATGAAAATTTTGCGGATTGGGATCTTCTACGCCAGC CCTTCACATCAGCTGCTCAAGGGAGCCGGATTATTGTGACAACACGAAGTCAGCGCGTTGCATCCATTATGTGTTCTGTT CATGTACACAACCTTAAGCCATTATCTGATGGGGATTGCTGGTCACTGTTTATGAGAACTGTTTTCCCTAATCAAGATCC GTGCTTAGATCAAGAAATTGGAGATCTTGCGGAAAGGATAGTGTACAAGTGCCACGGCTTGCCCTTGGCTGCGAAAACAC TTGGTGGTGTTTTACGGTTTGAAGGCAACGTCGTAGAATGGGAGAGAGTTCTAAGCAGCAGGATTTGGGATCTTCCCGCT GATAAGAGCAATCTACTTCCAGTTTTACGGGTAAGCTACTACTATCTTCCAGCTCACTTGAAACGATGTTTTGCCTATTG CTCTATATTTCCCAAAGGGCACGCGTTTGAGAAGGAAAGGGTAGTTCTTCTGTGGATGGCAGAAGGTTTCTTGCAGCAGA CGAGAAGCAGTAAGAACCTAGAAGAGCTTGGGGGTGAGTACTTTTCAGAACTAGAATCAAGGTCGCTTTTCCAAAAGACC AAGACGAGTTACATGATGCATGACTTTATCAATGAGCTTTCTCAGTTTGCTTCAGGAGAGTTCAGCTCCAAGTTTGAAAA CGGTTGCAGACTTCATGTTTCAGAAAAGACTAGGTATCTATCCTACCTACGAGATAATTATGGTGAACCTATGAGGTTTG AAGCTCTTCGTGAGGTCAAGTTTCTCAGAACTTTTCTACCACTCAGCCTCACAAATTCTTCGCGGTCATGCTGCTTAGAT ACAATGGTCAGCGAGAAGCTACTTCCAACGCTTACCCGCTTGCGTGTTTTGTCTTTGTCACATTACAAGATCTCAAGGCT GCCTTCAGACTTTTCCAGGAACTTAAGCCATGCCCGGTTCTTGGATCTCTCTCGCACTGAACTCGAGAAGCTTCCGAAGT CCCTTTGTTATATGTATAACCTCCAGACACTTCTTTTGGCCTACTGTTCCAGTCTGAAGGACCTACCTACAGACATCTGC AACCTCATCAATCTGCGGTATCTTGATCTGATTGGGACGAAGCTAAAACAAATGCCGAAAAGATTTGGTAGATTGAAGAG CCTCCAGACTCTAACAACTTTCTTCGTGAGTGCTAGTGATGGCGCAAGGATTTGTGAACTTGGAGAACTCGATGAACTCC ATGGCAAACTTAGAATTGTCGAGCTACAGCGAGTTGTGGATGTTGCTGATGCTGCAGGAGCAAATTTAGACAGCAAGAAA CATCTGAAGGAGATAGATTTTGTCTGGAGAACTGGATCTAGTAGCTCAGAGAACTACACAAATCCTCACCGGACGCAGAA TGAAGCTGAGGTCTTTGAGAAGTTACGCCCACATCGTCGTATCGAGAAGCTCGCCATTGAGAGATACAACGGAAAAAAGT TTCCAGATTGGCTATGCGATTCCTCGTTCTCAAGAGTTGTGTGCATACGCCTCAGAGAATGTCGAAACTGTTCCTCCTTG CCATCTTTTGGTCAACTACCAGGCCTCAAAGAGCTTTACATTTCAGGAATGGTCGGGCTTAGAAGCATAGGTTCCGGGTT CTACTCAAGTCCATCACTGCGCGATCGAGACCAACAGCCGTTTAAGTCACTTGAAACGCTGCGGTTTGATAACCTGCCGG ATTTGGAAGACTGGTCAGACATAAGGGTCACCAAAGGAGACTTATTCCCTTCTCTCAAGAAACTTTCCATATTGAGATGT CCGGAGCTAACCGGGAATCTACCGACTTTTCTTCCTTCTCTGATATCTCTTCATATCCACAAATGTGGGGTCTTAGATTT CCAGCCAGACCACCACGAGTACAGCTACAGGAATCTTCAAATGCTAAGCATAAAAAGCAGCTGTGACTCTCTCGTTACAT TTCCTTTAAGCCATTTCGCCAGCCTCCACACGCTTGAGTTTGATAACTGCATATCTCTGCAGTCTTTGCAGCTATCGAAG GAGCATTCGTTTGGTCCGAACGCTCTAAGAAACCTGAGAATCAATGACTGTCAGAATCTGCAGCGTCTTCCAGAGCTAAA CTTACAGGTCACGGTCACGGTCACGAACTGCAGGAATCTCAGACAGCCGATGGAACCACAGCCTCAATATCATCAGTTTC ATCTTCCAAGATTAAACGCTTGA |
| AA seq | Len:1021 aa MIVGEMVLSAFLQALFQTLMSGPFKSFFKRRELNECVLERLNIALLTISAVLIDAEEKQITNPSVEKWVNELRDVVYHAE DALDDIATEALRLNIGAESSSNRLRQLRVRTLGDFLERNSDHLETRLEKVTMRLERLASQRNILGLKEITAMTPKQRLPT TSLVDESEVVGRDDDKDEIMRFLIPENGEDSGTTVVAIVGIGGVGKTTLSQLLYNDHRVQNHFGTRVWAHVSEEFDVFTI TKKVYESVTSRPCEFTDLDVLQVKLKERLIGPFLLVLDDLWNENFADWDLLRQPFTSAAQGSRIIVTTRSQRVASIMCSV HVHNLKPLSDGDCWSLFMRTVFPNQDPCLDQEIGDLAERIVYKCHGLPLAAKTLGGVLRFEGNVVEWERVLSSRIWDLPA DKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKERVVLLWMAEGFLQQTRSSKNLEELGGEYFSELESRSLFQKT KTSYMMHDFINELSQFASGEFSSKFENGCRLHVSEKTRYLSYLRDNYGEPMRFEALREVKFLRTFLPLSLTNSSRSCCLD TMVSEKLLPTLTRLRVLSLSHYKISRLPSDFSRNLSHARFLDLSRTELEKLPKSLCYMYNLQTLLLAYCSSLKDLPTDIC NLINLRYLDLIGTKLKQMPKRFGRLKSLQTLTTFFVSASDGARICELGELDELHGKLRIVELQRVVDVADAAGANLDSKK HLKEIDFVWRTGSSSSENYTNPHRTQNEAEVFEKLRPHRRIEKLAIERYNGKKFPDWLCDSSFSRVVCIRLRECRNCSSL PSFGQLPGLKELYISGMVGLRSIGSGFYSSPSLRDRDQQPFKSLETLRFDNLPDLEDWSDIRVTKGDLFPSLKKLSILRC PELTGNLPTFLPSLISLHIHKCGVLDFQPDHHEYSYRNLQMLSIKSSCDSLVTFPLSHFASLHTLEFDNCISLQSLQLSK EHSFGPNALRNLRINDCQNLQRLPELNLQVTVTVTNCRNLRQPMEPQPQYHQFHLPRLNA* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | putative disease resistance RPP13-like protein 1; K19613 leucine-rich repeat protein SHOC2 (A) |