Names & Information
Knowledge of BnaC05G0457200ZS:
| Gene Name | BnaC05G0457200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At3g14460 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1 |
| NT seq | Len:4224 nt ATGGCGAGGTCCTATTCATCAAATAGCGCGAACGTGATGATTGAACGGATTAACAATTCTCAAGAATTGGTCGAATTATG CAAAGGAAAGTCCTCCAGTGCATTGCTGAAGAGATTGAAGGTCGCTTTGGCCACTGTCCACCCGGTGATTGCGGACGCTG ATCAGAAAGCAGATCATGTCCGAGAAGTAAAACATTGGCTTACAGGACTCACAGATGCTTTCTTCCAGGCAGAGGATGTT CTTGATGAGTTACTAACAGAGGCTTTGAGAAGAAGAGTAGTAGCTGAAGTGGGAGGATTCGGAGGACTATTCCAGAATCT TATGGGTGGTAACGAAGCCAACAAGAATAAGATAGAACGAAAGATGGAAAACGTAGTGAGACTGCTGGAACATCATGTGA GACACATAGAAATTATTGGATTAAAAGAATATAGCGAGACTCGGGAACCACAGTGGAGGCAAGCGTCACGGTCCAGACCT GATGATCTTCCACAAGGCAGAGTGGTTGGGCGAGCAGAAGATAAAGTAGCATTACTCAATTTGCTGCTTTCTGATGATGA AACCAGCATTAGGAGACCAGCTCTGGTTTCCACTGTGGGTATGCCTGGGGTTGGAAAGACAACCTTGACGCAGATAGTTT TCAAGGACGACTGTGTGACCAACCACTTTGATGTTAAAATGTGGATTTCTGTTGGGCTAAACTTTAATGTCTTCACGGTT ACAAAAGCCGTTCTGCAGGAGATCACTTCAAGTGCAGTTAATACTGAGGATCTACCTTCACTTCAACTTCAGCTGAAGCA AGAACTATCAGGGAAGAGATTTTTACTCGTTCTGGATGATATTTGGTCTGAAAGTAGCACAGAGTGGGAAAGCTTCAAGG TCGCCTTTACTGATGCAGAGGAAGGAAGCAAGATTGTTATAACCACACGAAGTGAAATTGTCTCCACAGCCGCACAGGCT GACAAAGTCTACCGAGTGAAGCTGATGACCACTGAAGAATGCTGGGAGCTGATCTCTAGATCTGCTTTTGGAAATATCTC AGTCGGTTCTATCAACCAAGAACTTGAAGGTATTGGCAAAAGGATTGCAGAACAATGTAAGGGCTTACCGTTAACTGCAA GAGCCATCGCATCTCATCTCCGGTCAAAGCCAAATCCTGACGACTGGTATGATGTATCAAAGAATTTCTCGACATACACT AACAGCATCCTTCCAGTTCTTAAACTGAGCTTTGACACTCTCCCTCCTGTACTCAAGCGATGTTTTTCCCTCTGCTCAAT ATTCCCCAAGGGTTATGTTTTCAAAAGAGAGGAGTTGGTGCTTCTATGGATGGCAATAGACCTCTTATACCAGCCAAGGA GCAACAAAAGATTGGAAGAGATTGGTTACGATTACATTGATGATTTAGTTGGTCGATCTTTCTTCCTGAGGTTGGACATC ACCATGAAAAGCTTCGTGATGCATGATCTCATGAATGATTTGGCTAAAGCTACTTCAGGAGATTTTTGCTTCAGACGGGA AGATGACAATATTGCGGAGGTGCCAAGCAAAGTTCGACATTTTTCCTTTTCCAGAAGCCAGTGTGATGCTTCCATGGCTT TCAAGTCCATCTCTGGAGCTGAGTTTCTTAGAACCATTCTTCCCTTCAATGTTCCAACCGGTCTTGAATCTCTCCAACTA ACAGAGAAAATTTTGAATCCATTGCTCCAGGCATTGAGCAGCCTGAGAATTCTCAGCTTGTCTCATTATCAGATAACTCG CTTGCCTAAATCATTAAAGGGTTTGAAGCAGTTACGGTATCTAGATCTGTCAAGCACCAAAATAAAAGACCTCCCAGAGT TTGTGTGTACACTCTGTAATTTGCAGACACTGTTACTATCAAACTGCCGTTACCTGACTAGCCTGCCAACAAATATAGCC GAACTCATCAACTTGCGCCTCCTCGACCTTGTTGGCACTCCCTTGGTAGAGATGCCGCTAGGAATAAGAAAGCTGAGAAG CTTGCAGAAGTTATCTAATTTTGTTGTAGGAAGGCTGAGCGGAGCCGGACTGCATGAGCTCAAAGAACTTTCTGACCTCC GAGGGACTCTTCGCATCTCTGAGCTACAAAATGTGGCCTTCGCCTCAGAAGCAAAAGACGCTGGTTTGAAAAGGAAGCAA TTGCTTGATGGGTTAATACTGAAGTGGACTGTGAAAGCTTCTAGCTTCGCCCCTGGTAGTCTTAGTACATTGTCTTGTGA CCAGAAAGAGGTCCTGAAGATGCTAGAACCTAACCCAAACTTGAAAACGTTCTGCATTGAGTCTTATCAGGGTTCAGAAT TTCCTAAATGGTTGGGTGATTCTTCATTCAATAGTATTGCATCTGTCACTCTCAGTAGCTGCAACCTCTGCATATCACTA CCTCCACTGGGGCAGTTGCCTTCACTCAAGTACCTCAGTATTGAGAAATTTAACATTCTGCTGAAGGTTGGTCTAGACTT CTTCTTCGGTGAGAACACCTCTTCTAGCTTTCTACCGTTTCAATCCTTGCAAACTCTGAAATTCTATGCGATGCCGAGAT GGGAAGAATGGACTTGTCCAGAACTAGAAGATGGGATCTTTCCTTGTCTCCAGAAACTAATGATAGAAAAATGCCCCCGC TTAATGAAAAAATTTCCAGAAGGACTCCCTTCTTCAACTGAAGTCGCCATCTCTGATTGCCCCCTAAGAGCAGTTGGTGA AGGAGAAGGTTCCTCCCCAGGGAATATGAGCATAACGGAACCACCACCTTCCCCTGCAGAGAGTCCGACGTTGGAAAATC CAAGTTCTCAATCAGATATAGGTACAAGTAGTCAGAGTAATAATGACACTGAAGTAACTTCAACATCAAGCATGTCTTCT TTGCCAAAGAACCATCCACTATCAGAAGAGATGGACCAGTATATAACTCAACTTGAAAGCTCGCATCAGCATATTGAAGA ACCTGCTGTGATATCTGCAAGGTTCTCAGAACTCATCTCCTCCGCTGATCTGAGCTCCATACTGTCACAATCACCACTTC GTCCAGATCTCAAAAATAGAGGCTTTGATCACCCTGGAAGTAGTAGCAACCAGAGCCAGCAACCTAGAACGCCGGTTGCT CCAAGTGGACAGTCTAGTGACAACGGCATACCCGTGCCTTCGCAATCCAATGATGAAACAGACATGGAATACTTAAAAGT GACAGATATCTCTCACCTGATGGAGCTTCCCCAGAACCTGCAGTCCCTCCACATCGACACCTGCGACGGCCTAACTTGTT TACCGGAAAGCCTCTCCGAAAGCCAACCAAATCTCCACGAGCTCCTCATCATTGCCTGTCACTCACTAGAATCCTTCCCT CCAACCACATTAAAAACCCTATACATAAGAGACTGCAAGAAACTCAACTTCCAAGAAACCTTACAGCCAACGCGAAGCTA CTCACAGCTAGAGCACCTCTTCATCGAAACCAGCTGCAGCAACAACCTCATCACTTTCCCTCTATCCCTCTTCCCAAAGC TCAAATCCCTCTCAATCACGGCCTGCGAAAGCTTCAGAACCTTCTCCATCCACGCCGGACTCGGAGACGACCGAATCGCA CTCAAATCCCTAGAAATCAGAGATTGCCCAAACCTAACGACCTTCCCACCCGGAGGCCTCCCAACGCCGAAGCTCTCTTC GATCCTCCTCTCAAACTGCGAGAACCTCCGAGCGTTACCGGAGAAGCTCTTCGGCCTCACGTCTCTCCAATCACTCTTCG TAATCAAATGCCCAAAGCTCGATTCCATCCCCGGCGGAGGCTTCCCGAGCAATCTCCGAACGCTCTGCATCAACCTATGC CCCAAGCTGACGCCTCGGATCGAATGGGGGTTGCGAGATTTGGAGAATCTTCGGAATCTCGAGATCGAAGGAGGTAACGA AGACATCGAATCGTTTCCCGACGAAGGATTGCTGCCGAGAGGGATATTTTCTCTGAGGATAAGCCGATTCGAGAATCTCA GTACGTTGAATCAGTTAGGGTTTCGAGATACGAAGGGCTTGGAGACGATGGAGATCGACGGCTGTGATAAGCTAAGGATA TCGATGGAGGAGGATCTCCCTCCTTCCTTGTCTTGTTTGCGGATAAGCTCTTGTTCGTTGTTGAGTGAGAAACTTGCTGA GCAAGGAACAGAGTGCGTCTTTAGTATTCCGTATGTGGAAATCGACGGCGAGATCTTCTCTTGA |
| AA seq | Len:1408 aa MARSYSSNSANVMIERINNSQELVELCKGKSSSALLKRLKVALATVHPVIADADQKADHVREVKHWLTGLTDAFFQAEDV LDELLTEALRRRVVAEVGGFGGLFQNLMGGNEANKNKIERKMENVVRLLEHHVRHIEIIGLKEYSETREPQWRQASRSRP DDLPQGRVVGRAEDKVALLNLLLSDDETSIRRPALVSTVGMPGVGKTTLTQIVFKDDCVTNHFDVKMWISVGLNFNVFTV TKAVLQEITSSAVNTEDLPSLQLQLKQELSGKRFLLVLDDIWSESSTEWESFKVAFTDAEEGSKIVITTRSEIVSTAAQA DKVYRVKLMTTEECWELISRSAFGNISVGSINQELEGIGKRIAEQCKGLPLTARAIASHLRSKPNPDDWYDVSKNFSTYT NSILPVLKLSFDTLPPVLKRCFSLCSIFPKGYVFKREELVLLWMAIDLLYQPRSNKRLEEIGYDYIDDLVGRSFFLRLDI TMKSFVMHDLMNDLAKATSGDFCFRREDDNIAEVPSKVRHFSFSRSQCDASMAFKSISGAEFLRTILPFNVPTGLESLQL TEKILNPLLQALSSLRILSLSHYQITRLPKSLKGLKQLRYLDLSSTKIKDLPEFVCTLCNLQTLLLSNCRYLTSLPTNIA ELINLRLLDLVGTPLVEMPLGIRKLRSLQKLSNFVVGRLSGAGLHELKELSDLRGTLRISELQNVAFASEAKDAGLKRKQ LLDGLILKWTVKASSFAPGSLSTLSCDQKEVLKMLEPNPNLKTFCIESYQGSEFPKWLGDSSFNSIASVTLSSCNLCISL PPLGQLPSLKYLSIEKFNILLKVGLDFFFGENTSSSFLPFQSLQTLKFYAMPRWEEWTCPELEDGIFPCLQKLMIEKCPR LMKKFPEGLPSSTEVAISDCPLRAVGEGEGSSPGNMSITEPPPSPAESPTLENPSSQSDIGTSSQSNNDTEVTSTSSMSS LPKNHPLSEEMDQYITQLESSHQHIEEPAVISARFSELISSADLSSILSQSPLRPDLKNRGFDHPGSSSNQSQQPRTPVA PSGQSSDNGIPVPSQSNDETDMEYLKVTDISHLMELPQNLQSLHIDTCDGLTCLPESLSESQPNLHELLIIACHSLESFP PTTLKTLYIRDCKKLNFQETLQPTRSYSQLEHLFIETSCSNNLITFPLSLFPKLKSLSITACESFRTFSIHAGLGDDRIA LKSLEIRDCPNLTTFPPGGLPTPKLSSILLSNCENLRALPEKLFGLTSLQSLFVIKCPKLDSIPGGGFPSNLRTLCINLC PKLTPRIEWGLRDLENLRNLEIEGGNEDIESFPDEGLLPRGIFSLRISRFENLSTLNQLGFRDTKGLETMEIDGCDKLRI SMEEDLPPSLSCLRISSCSLLSEKLAEQGTECVFSIPYVEIDGEIFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | NB-ARC domain disease resistance protein, putative; K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13] (A) |