Names & Information
Knowledge of BnaC05G0488100ZY:
| Gene Name | BnaC05G0488100ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g40280D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:3366 nt ATGGATCTTTACCTTCTCCTTGTGATAATTGCTACGCTTTTGTGTAGTAGAATCTTTTCTTTTGTTTATGCAAAGCTCAG AGTCCAAGAAAACAAAATAATCGCTTATTCTCCTTCTTCATCATCTCCACCATCTCGCCAGTCGTCTTTGCCTCGTAACT GGACACACGATGTCTTCCCTAGCTTCCATGGAGCAGATGTCCGTAAATCCTTTCTCAGTCATCTTCTCAAGGAGTGTAGG AGCAAAGGAATAAATCTGTTCATAGATAACGAGATCACTAGAGGAGAGTTTATCGGCCCTGAGCTCAAGAAGGCAATCCA AGGATCAAGAATTGCGATTGTGTTGCTCTCGAAAAGATACGCTTCTTCCTCTTGGTGTCTTGACGAGTTAGTGGAGATTA TGAAGTGTAAGGAAGATTTAGGTCCAACGGTGATGCCAGTTTTCTATGAAGTGGATCCAAGTGATGTCAAGAAGCAGGCC GGTGAGTTTGGGAAAGTCTTCAAAAAAACTTGTAAAGGTAAAACAAATGAGGTTACTAGGACATGGAGTGAAGCTCTAGC AAAAGTGGCCACCCTCGCTGGTTACCATTCTAATAACTGGGATAATGATGCAAAAATGATCGAAGATGTTGCCACTGATG TCGCAAACAAGTTGTTTAACTCCACGCCGCCAAGATATTTCGACGAGTTCATTGGGATGGAAGGTCATATGAACAAGATT TCGCCTGTTTTACGCACAGATTTGGATGAAGTGAGGATGATAGGGATTTGGGGGCCGGCTGGGATTGGCAAGACCACCAT TGCTAGGTGTCTGTTCAATCAACTATCCCATTCGTTTCAATACAGTGTCTTTCTGATGAATGTCAAAGCAATGTATACGC CACCGATTTGTTCAGACGACCACAATGTGAAGTTGCTTTTCCAGCAAAAGTTTTTGTCTCAAATACTCAACCAAAAAGAA GATTTCGAGATTTCTCACTTGGGAGTTGCACAAGAAAGACTGAATGATAAGAAAGTTCTTGTTGTTCTTGATAACGTTGA CCGGTTAGTACAACTAGAAGCCATGGCCAAAGAAACTGGGTGGTTTGGTCATGGAAGTCGAATTATCATTACGACGCAAG ATCGAAAGATTCTGAAGGCACATGGGATCACTCATATATACAAGGTTGATTTTCCGTCAGATCGTGAGGCTATTCAGATG TTTTGTATGTATGCTTTTGGTCAAAAGTCCCCTGAAGATGGTTTTGAGAACCTTGTATGGGAAGTTACAAGACTCGTCGG TAAACTCCCTTTGGGACTAAGGGTTATGGGATCTCATTTTCGTGGAATGTCCAAGCAGGAGTGGGAGAATGAACTACCAG AGCTATGGAGATGCCTTGATGGAGAAATTGAGAGCATTTTGATGTTCAGTTATAACGCATTATCTCAAGAAAATAAAGAT TTGTTTCTTCATATAGCCTGCATTTTCAACCTTGAAAGTATAGAGAGAATGGTAGAGTATCTTTCAAAGATATTTCCTGA TGTGAGGCAACGGCTTAACGTCTTAGCTGAGAAGTCTTTCATATCTTTGGAAAGTGAACTCGTGAGTATGCATGATCTGC TAGTCCAGCTGGGTAGAGACATTGTCCGCAAACAGTCCAGTGAACCTGGACAACGCCAGTTTCTGGTCGATAAAAGAGAG ACTTGTGAAGTACTTTCTGATGATGCAGCGGGTAGTGGAAATGTTATTGGCATAAAGTTTGATGGAGACGAAATAAATGT GAGTGAGAGAGCCTTTGAAGGAATGTCTAATCTCCAGTTCTTAAGACTCGGACCGGAAATTGATAATGGAGGAGATGCAT TTCATCTATTTGGTGGACAAAGCTATTTATCTCGTAAACTTAGATTACTAAATTGGAGCTATTTTCCGCTGACATGTTTG CACTGTATTCCCAAGCCAGAGCTCCTCGTGGAACTAATCATGCCTGACAGCAAACTTGAGAGGTTGTGGGAAAGAACAAA ACCGCTTAGCAATCTCAAGTGGGTTGATTTGGCGCATTCAAAAAACTTGAAGGATGTTTCTAGTCTCTCAACTGCCACTA GTCTACAGGAATTAAATCTCAGAGGATGTTCAAGTTTAGTGGAGCTTCCCTCTTCTATTGGAAATGCCATTCATCTCAAG AAGTTGAATCTCACTGGATGTTCAAGTTTGTTAGAGCTTCCTTCCTCTATTGGGAATGCAACTAATCTCCAGTTTCTATC TCTTAGTAATTGTTCAAGTTTAGTGGAGCTCCCCTCTTCTATTGGGAATGCCATAGGGAACCTAGAGCATTTGTATTTTA GTGATTGCTCAAGTTTAGTGGGAGTCCCTTCCTCTATTGGAAATGCAACTAATCTCAGGAATTTGGATTTTAGCAGATGC TCAAGTCTTGTGGAGCTTCCTGCCTCTATTGGAAACCTCCAAAAACTAGACTCTTTGATTTTGAGAGAATGTTGCAAGCT GGAGGCTCATCCTGTCAACATCATCTTTAAATCTCTGATGAGACTTGATCTCACTGATTGCTCCTTGATGAAAAGTTTTC CTGAGATCTCGACAAACATCAAATATATGCATCTCGCTGGAACTGCGATTAAAGAAGTGCCTTCATCGATCAGGTTGTGG CCTCGTCTTGATGTCTTGCATATGTCATACAACGAGAAACTCAAGGAGTTCCCTCATGTTCTTGACATCATGACAGATTT AGTCATGAGCAACACAGAAATACAAGAGATTTCACCATGGATAGAGAGAAGCTCTCGTCTTGATCGACTTGTACTCACAG GATGCAAACAGCTTTTGTCACTCCCACAGCTTCCAAGTTCATTATCACAGTTAGACGCAGAAGATTGTGAGTCTCTGGAG AGACTAGACTGCTCCTTTCTTAATCAAAAGATTGATCACAACTTCGCCAAATGCTTCAAACTGAATAAAGAAGCGAGAGA TGTCATCATCAAGTCATCGACTAATAAAGTAACGTTCTTACCCGGTAAAGAAATGCCTAACTACTTCAATTATCAAGCTA ATGGAGGTTCCCTAGTAATGAAGTTGAACGAGAGGCCTTCATCTTCATCAATGATATGGAAGGCTTGCATCTTGCTAGTC CGTAAAGATGAGGTTGAAGCTGGTATAGGACAAATGGTGTATGTACATCATGGGATCAAACAGAATAGCCTCGATGTACC GTGCAGTCCAAGAAACCACACTCTGTTTCGTCCTTTAACGGAACATCTCTACATCTTTGAATTCGAAGCAGACGTGACTT CAGACGAACTTTGCTTTGAGTTCAGGGTCAACAAAGAAGAATGGATGATAAAAGAATGTGGAGTGCATTACGTTAATACC AGTTGA |
| AA seq | Len:1122 aa MDLYLLLVIIATLLCSRIFSFVYAKLRVQENKIIAYSPSSSSPPSRQSSLPRNWTHDVFPSFHGADVRKSFLSHLLKECR SKGINLFIDNEITRGEFIGPELKKAIQGSRIAIVLLSKRYASSSWCLDELVEIMKCKEDLGPTVMPVFYEVDPSDVKKQA GEFGKVFKKTCKGKTNEVTRTWSEALAKVATLAGYHSNNWDNDAKMIEDVATDVANKLFNSTPPRYFDEFIGMEGHMNKI SPVLRTDLDEVRMIGIWGPAGIGKTTIARCLFNQLSHSFQYSVFLMNVKAMYTPPICSDDHNVKLLFQQKFLSQILNQKE DFEISHLGVAQERLNDKKVLVVLDNVDRLVQLEAMAKETGWFGHGSRIIITTQDRKILKAHGITHIYKVDFPSDREAIQM FCMYAFGQKSPEDGFENLVWEVTRLVGKLPLGLRVMGSHFRGMSKQEWENELPELWRCLDGEIESILMFSYNALSQENKD LFLHIACIFNLESIERMVEYLSKIFPDVRQRLNVLAEKSFISLESELVSMHDLLVQLGRDIVRKQSSEPGQRQFLVDKRE TCEVLSDDAAGSGNVIGIKFDGDEINVSERAFEGMSNLQFLRLGPEIDNGGDAFHLFGGQSYLSRKLRLLNWSYFPLTCL HCIPKPELLVELIMPDSKLERLWERTKPLSNLKWVDLAHSKNLKDVSSLSTATSLQELNLRGCSSLVELPSSIGNAIHLK KLNLTGCSSLLELPSSIGNATNLQFLSLSNCSSLVELPSSIGNAIGNLEHLYFSDCSSLVGVPSSIGNATNLRNLDFSRC SSLVELPASIGNLQKLDSLILRECCKLEAHPVNIIFKSLMRLDLTDCSLMKSFPEISTNIKYMHLAGTAIKEVPSSIRLW PRLDVLHMSYNEKLKEFPHVLDIMTDLVMSNTEIQEISPWIERSSRLDRLVLTGCKQLLSLPQLPSSLSQLDAEDCESLE RLDCSFLNQKIDHNFAKCFKLNKEARDVIIKSSTNKVTFLPGKEMPNYFNYQANGGSLVMKLNERPSSSSMIWKACILLV RKDEVEAGIGQMVYVHHGIKQNSLDVPCSPRNHTLFRPLTEHLYIFEFEADVTSDELCFEFRVNKEEWMIKECGVHYVNT S* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |