Names & Information
Knowledge of BnaC05G0549200ZY:
| Gene Name | BnaC05G0549200ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein EUTSA_v10022404mg, partial [Eutrema salsugineum] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2778 nt ATGATTGAAACAATTGTTACCGATATTTCGAACAAGTTCAACGATTCTACAACATCAAATGATTCCAACAGCTTGGTTGG GATTGGAACTCATATCAAGGAGATAGAGTCATTGTTGTCCTTAGAATCCGATGAAGTCCGGATGGTTGGTATCTGGGGTC CTTCTGGAATTGGTAAGACGACCATCGCCAGAGCTTTATATGGAGAGCTCTCTAGTAAGTTTACACATGCTGCTTTTATT GAGAGTACCCAAGGGAAGTTTGAGCAAAACTATCGAGACGAGCACGCGTTCAAGTTGCATTTACAAGAACAACTTTTGTC TAAGACCTTAAATCAGAAAGATGTAAAAATAGGTCATCTGGGTGTGGCAAAAGCAAGGCTGAAGGACAAGAAAGTGCTTG TCGTTCTTGATGATGTGGATGACTTAAAGCAGCTAGAAGCCATGACTGACCAAACTTGCTGGTTTGGGCCTCAAAGTAGG ATTATCATCACGACAAAGGATAAAAAGCTGTTGGTAGCACATGCGATCAACCATATTTACCATGTGGATTTTCCATCTAC ATCTGAAGCTCTTGAAATTCTCTGTCTGTCTGCTTTTCGTCAAAATTCGCCGTCATTTGGGTTTAAGGACATGGCCATTG AAGTTACCCGGCTTGCCGGTAACCTTCCTTTGGGTCTACGTGTTTTTGGCGCATATCTGCGAGGAATGTCCAGAGATCAG TGGATATATGCATTGCCTCGTCTTAGGACTAGTCTTGATGGGGAGATTGGGAAAGTATTAAGGTTCAGCTATGATGCTTT ATCCGAGGAAGATCAAGAATTGTTTCTTCATATAGCATGTTTTTTCAATGGTTGGTGGATTGATGACGTTGTGGACTGTC TTTCGGAGAGTCGTTTGAACGTCAACCACGGGCTCCAAGTGTTGTTCGATAGATGTTTCATATCTATACTCGAACGGGGA CGGTTGGTGGTTCATAATTTACTGGAGCAATTGGCTTTTGAGTTTGTTCGTAAACAGTCTGTTTCTGATCCTGGGAAACG TCAGTTCTTGGTGGATGCTCAGGAAATTTGTGAAGTGCTCGAGGAAAATGGTGTAAGTTTTGATATAAACTGTCCGCTCC CATGTCTGAAGTTGATGGATCTATCTAATTCCGACTACCTCAAAGAACTTCCAGATCTGTCTAATGCCCCTAATCTCAAG AAACTGACAGCTATTTTTTGCCCAATTCTGTCGGAGATCTCCTCTATTGGGAAGTCCACTAGTCTCCAGTATTTGAATCT AGCTGGTTGCTCCAACTTGATAGTGATTCCCTCTTCCATTGGGAATGCCATTAATCTCCAGATGTTGAATCTCCTGATAT GCGACGGTCTGGTTGAACTCCCATCTTCTATTTGGAGCCTCAAGAAGTTAAAGCATCTGTCAATTATAGGATGCCCAAAG ATCCGTTTGGGGTCACAGTTGAGAAGCTTTCCTGATATTTCCAGTAACATCACATATCTCCATACGAGTGATGAAGAAAT AGAGGAGTTTCCTTCATCAATCATGGCTTTTCCGTGTCTTCGTAAACTCACTGCAACAAATGCCAAAAGTCTCAAGGTGT TTCCAGACGTTCCTGCCACCATCAAAGTGTTAGAATTTCAGAACGCGGTAATAGAAGAAATTCCTCCATCGATTCAGAGT CTCTCACGTCTCACTGAACTAACCATGTTTGGCTGCCAGAAGCTAAAGGTCCTTCCAACTAACGTCAACCTGCAATCTCT CTATTCACTTAATTTCAGTTACTGCACACAATTGAGAACGTTTCCAGAGATATCTACAAGCATTGGATATCTTAATCTGA GCGATACTGCTATAGAAGAAGTCCCTTCATCCATATGGTCTTGGTCCCATCTTCTTGAATTGAACTTGGAAGATTGCCGC AGCCTTCGGGTGCTCCATAGTTTTCCTGACAACATCGAAGAGTTGGACTCGGACTTGAGCGATACGGGAACAGATTTCTC AGGTGGTGATTCGGAGACTGTTCTACCGTTACGTATAAACCTCAAAGGGTGTAAGAGTCTTGTGTCATTGCCCCACATTC CGTATTTCGTTTCACTCCTTGATGCATCTAACTGTGAGTCGCTGAAGATAATAGATGGCTTCTTTACCAATCCAGAGAGA TGTCTCAGCTTTGCTAATTGTTCCAAGCTAAGTGAAGCAGCGAGAGAACTCATCGAGGTATCGGATTGCAAGTTGGCGCT CTTACCTGGTAAAGAACTGCCTGCAGACTTTGATCACCGAGCAAGGGAGGGTGCACTAACTGTCAATTTGTGTCAGATCC CTCTTCCTTTATTCTTCAGATTTAAAGCTTGCCTTCTGCTGATTCATGGCGACTATATAGAAAGGAAGGATTCCAGTAAG AATTATATGTTCGATGAATGGATGGAAGGCAAGGGGCTTTCCTGTCACATCTCGTGCGTTCAGAATGGCGTCAAAGTTGG ACATGGATCCTGCAAGTACCAGCTACCAGCAGTACTTGGATTTATGGAGCATGTGTATTTCTTGGAATCTTCCATTTCAC TAAACCTTCCTGAAACAGATGAGAATGTCAGCCAGCTTCATTTTGAGTTCAAGATCACTGGTAAATACTGGGATGTAAAA GACTTTGGTCTACAGCTCTTCGTAGACCCTGATGTTCGTGATGACCATGTATGCTGTGGTGATACTTACAAAGAAACTGC GGACATCAATATTAGAGAAAACTTACATGCTGGAACAATGTCAAGAGAAACAATTTAA |
| AA seq | Len:926 aa MIETIVTDISNKFNDSTTSNDSNSLVGIGTHIKEIESLLSLESDEVRMVGIWGPSGIGKTTIARALYGELSSKFTHAAFI ESTQGKFEQNYRDEHAFKLHLQEQLLSKTLNQKDVKIGHLGVAKARLKDKKVLVVLDDVDDLKQLEAMTDQTCWFGPQSR IIITTKDKKLLVAHAINHIYHVDFPSTSEALEILCLSAFRQNSPSFGFKDMAIEVTRLAGNLPLGLRVFGAYLRGMSRDQ WIYALPRLRTSLDGEIGKVLRFSYDALSEEDQELFLHIACFFNGWWIDDVVDCLSESRLNVNHGLQVLFDRCFISILERG RLVVHNLLEQLAFEFVRKQSVSDPGKRQFLVDAQEICEVLEENGVSFDINCPLPCLKLMDLSNSDYLKELPDLSNAPNLK KLTAIFCPILSEISSIGKSTSLQYLNLAGCSNLIVIPSSIGNAINLQMLNLLICDGLVELPSSIWSLKKLKHLSIIGCPK IRLGSQLRSFPDISSNITYLHTSDEEIEEFPSSIMAFPCLRKLTATNAKSLKVFPDVPATIKVLEFQNAVIEEIPPSIQS LSRLTELTMFGCQKLKVLPTNVNLQSLYSLNFSYCTQLRTFPEISTSIGYLNLSDTAIEEVPSSIWSWSHLLELNLEDCR SLRVLHSFPDNIEELDSDLSDTGTDFSGGDSETVLPLRINLKGCKSLVSLPHIPYFVSLLDASNCESLKIIDGFFTNPER CLSFANCSKLSEAARELIEVSDCKLALLPGKELPADFDHRAREGALTVNLCQIPLPLFFRFKACLLLIHGDYIERKDSSK NYMFDEWMEGKGLSCHISCVQNGVKVGHGSCKYQLPAVLGFMEHVYFLESSISLNLPETDENVSQLHFEFKITGKYWDVK DFGLQLFVDPDVRDDHVCCGDTYKETADINIRENLHAGTMSRETI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |