Names & Information
Knowledge of BnaC05G0549600ZY:
| Gene Name | BnaC05G0549600ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3495 nt ATGACTCTCTCTCGCAATTGTAAACACCATGTCTTTCCTAGCTTCCACGGGCCAGATGTTCGTAGAGGCTTTCTCACCTA CTTACTGAAGGAGTTCAGAGAGAAAGCAATCGACGTCTTCATAGACAATGATATAGAGAGGAGCAAGTTGATTGGTCCCG AGCTCACAGAAGCTATAAGAGGATCGTTAATTGCAGTTGTCTTGATCTCGCGGAACTACGCTTCATCAACATGGTGTCTG AACGAGTTGGTGCAGATCATGAAGTGTTGGGAAGAAGATAAGCAGACGGTGGAGGTGATTTTCTATGAAGTGGATCCATC TGACGTGAAAAAGCAGAAGGGCGACTTCGGAGCTGTCTTTGATAGAACTTGTGCAGAGAAATCAACGGAGGAAGTTGAGA GATGGAGAAAAGCTTTGCATATTGTGGCTCAAATCGCTGGTTACCATACAAGCAACTATGATGATGATGCAGTCATGATT GCAAAAATTGTTACCGATGTTTCGAACAAGTTCATTGATTCTACAACATCAAATGATTCCGACAGCTTAGTTGGGATTGA AACTCATATACGGGAGATACAGACATTGTTGTCCTTAGAATCCGATGAAGTCCGGATGGTTGGTATCTGGGGTCCTGCTG GAATTGGTAAGACGACCATCGCCAGAGCTTTATACGGAGAGCTCTCTAGTAAGTTTACACATGCTGCTTTTATTGAGAGT ATCCAAGGGAAGTTTGAGCAAAATTATCGTGACGAGCACGCCTTCATGTTGCATTTACAAGAAAAACTTTTGTCTGAGAC CTTAAATCAGAAAGATTTTAAAATAGGTCATTTGGGTGTGGCAAAAGCAAGACTGAAGGACAAGAAAGTGCTTGTCGTTC TTGATGATGTGGATGACTTAAAGCAGCTAGAAGCCATGACTGACCAAACTTGCTGGTTTGGGCCTCAAAGTAGGATTATC ATCACAACAAAGGATAAAAAGCTTTTTGTAGCACATGAGATCAACCATATTTACCAAGTGGATTTTCCATCTACATCTGA AGCTCTTGAAATTCTCTGTCTGTCTGCTTTTCGTCAACATTCACCTTCATCAGGGTTTGAGGACATGGCCATAGAAGTTA CACGGCTCGCCGGTCGTCTTCCTTTGGGTCTATGTGTTTTTGGCGCTTATCTGCGAGGAATGTCCAGGGATCGGTGGATA CATGCATTACCTAGACTTAGGACGAGTCTTGATGGGAAGATTGAGAAAGTGTTAAGTTTCAGCTATGATGCTTTATGCAA GGAAGATCAAGAATTGTTTCTTCATATAGCATGTTTTCTCAAAGGTGAATGGATTACTGACGTGGTGGAGTGTCTTGCGG AGAGTCGTTTGAACGTCAACCACGGGCTCCAAGTGTTGTTGGATAAATGTTTCATATCTATACGCAAATGGGGACGGTTG GCGGTGCATAATTTGCTTGAGCAATTGGCTAAAGATATTGTCCGTAAACAGTCTGATAATCCTGGGAAACGTCAGTTCTT GGTGGATGCTCAGGACATTTGTGATGTGCTCGAGGAAAATGCTGGCACTGAAACCATTAGAGGAATAGATTTTGACTTAT CGGAGGTCAGGGGAGACTTAGTTATTGACGAGCGAGCCTTTGAAGGGATGTCTAGGCTCCAGTTCTTAAGATTTCAGAAA CGGGGTTTGTATAACAACACCAAACTTCTCCTACCCCAGGATCTGAAGTTTAGAGCTAGTAAACTTAGATTTCTTGAATG GGATCAGTTTCCGCTGGCATGTTTTCCTCGTGAGTTTCAACCGCGGCGTCTTGTCAAACTTATGATGGAGCACAGCAAGC TTGAAAAGCTGTGGGAAGGACCTATTCCTCTCCCTTGTCTGAAGTTGATAGAGCTGTCTAGTTCCGACTACCTCAAAGAA CTTCCGGATCTGTCCAATGCCACTAGTCTCAAGGTACTGAGGGCTGGTTTTTGCTCAAGTCTGTCGGAGATCTCCTCTAT TGGGAAGTCCACTAGTCTCGAGGAGTTACATCTCGCTGGTTGCTTTGAGTTGATTGTGATCCCCTCGTCCATTGGGAATG CTATTAATCTCAAGACGTTGAATGTCCAGGTGTGCCAGGGTCTGGTTGAACTCCCCTCCTCTATTTGGAGCCTTAAGAAG TTAAAGAAACTGTTAATTGCAGGATGCCCAAACCTTAACCATTTGGGGTCACAGTTGAGAAGCTTTCCTGATATTTCCGG AAACATTACAGAATTAGATATGAGTAATACAGCGATAGAAGAGTTTCCTTCGTCAATCATGGCTTTTTCGTGTCTTCGTA AACTCACAACAATGACTGCTGAAAGTCTCAGGGTGTTTCCAGATGTTCCTGACACCATCGAAGTGTTAAAATTGCACAAT GCGGGAATAGAAGAAATTCCTCCGACGATTAAGAATCTCTCACGTCTCACTACACTAAGCATGCCTCGCTGCAAGAAGCT AAAGGTCCTTCCAACCAACGTCAACCTGCAATCGCTCTCTTCACTTGATCTCAGTTCCTGCACACAATTGAGAACTTTTC CAGAGATATCTGTAGGCATTAGATCTCTTAATCTGAGCAATACTGGTATAGAAGAAGTCCCTTCATCCATATGGTCTTGG TCCAGTCTTCTTAAATTGAACTTGGAAGATTGCCACAGCCTTCGGGTGTTCCATTGCGTTCCTGACAACATCGAAGAGTT GGACTTGAGAAATACGGGAACAGATTTCTCAGGTGGGGATTTACGTATAAACCTCAAAGGGTGCAAGAATCTTGTGTCAC TGCCCCACATTCCGTATCGCGTCTCATACCTTGATGCATCTAACTGTGAGTCGCTGAAGAGAATAGATGGCTTAGTTAGC AATCCAGAGAGATGTCTCAGTTTTGCTAACTGTTTCAAGCTGAGTGAAGCAGCGAGAGAACTCATCGAGGAATCGGATTA CAAGTTTGCGCTCTTACCTGGTGGAGAACTGCCTGCAGAATTTGATCACCGAGCAAGAGAGGGTTTACTAACTGTCAATT TGGATCAGAGCCCTCTACCTTTATTCTTACGATTTAAAGCTTGCCTTTTGCTGCTTCATGGACACTATATAGAGGACGAG GATGCCAGTGAGGATGATAAGGACGATGAATGGATGGGTGCCAAGAGGCTTTTCTGTGACATCTGGTACGTTCAGAATGG CCTCTATGTTGGACATGGATCCTGCAAGTACCAGCTACCAGCAGTACTTGGATTTAAGGAGCATGTGTATTTCTTGGAAT CTTCCATTTCACTAAACCTTCCTGAAACAGATGAGAATGTCAGCCAGCTTCATTTTGAGTTCAAGATCACTGGTAAATAC TGGGATGTAAAAGACTTTGGTCTACAGCTCTTCGAAGACCCTGATGTTCGTGATGACCATGTATGCTGTGGTGATACTTA CAAAGAAACTGCGGACATCAATATTAGAGAAAACTTACATGCAGGAACAATGTGA |
| AA seq | Len:1165 aa MTLSRNCKHHVFPSFHGPDVRRGFLTYLLKEFREKAIDVFIDNDIERSKLIGPELTEAIRGSLIAVVLISRNYASSTWCL NELVQIMKCWEEDKQTVEVIFYEVDPSDVKKQKGDFGAVFDRTCAEKSTEEVERWRKALHIVAQIAGYHTSNYDDDAVMI AKIVTDVSNKFIDSTTSNDSDSLVGIETHIREIQTLLSLESDEVRMVGIWGPAGIGKTTIARALYGELSSKFTHAAFIES IQGKFEQNYRDEHAFMLHLQEKLLSETLNQKDFKIGHLGVAKARLKDKKVLVVLDDVDDLKQLEAMTDQTCWFGPQSRII ITTKDKKLFVAHEINHIYQVDFPSTSEALEILCLSAFRQHSPSSGFEDMAIEVTRLAGRLPLGLCVFGAYLRGMSRDRWI HALPRLRTSLDGKIEKVLSFSYDALCKEDQELFLHIACFLKGEWITDVVECLAESRLNVNHGLQVLLDKCFISIRKWGRL AVHNLLEQLAKDIVRKQSDNPGKRQFLVDAQDICDVLEENAGTETIRGIDFDLSEVRGDLVIDERAFEGMSRLQFLRFQK RGLYNNTKLLLPQDLKFRASKLRFLEWDQFPLACFPREFQPRRLVKLMMEHSKLEKLWEGPIPLPCLKLIELSSSDYLKE LPDLSNATSLKVLRAGFCSSLSEISSIGKSTSLEELHLAGCFELIVIPSSIGNAINLKTLNVQVCQGLVELPSSIWSLKK LKKLLIAGCPNLNHLGSQLRSFPDISGNITELDMSNTAIEEFPSSIMAFSCLRKLTTMTAESLRVFPDVPDTIEVLKLHN AGIEEIPPTIKNLSRLTTLSMPRCKKLKVLPTNVNLQSLSSLDLSSCTQLRTFPEISVGIRSLNLSNTGIEEVPSSIWSW SSLLKLNLEDCHSLRVFHCVPDNIEELDLRNTGTDFSGGDLRINLKGCKNLVSLPHIPYRVSYLDASNCESLKRIDGLVS NPERCLSFANCFKLSEAARELIEESDYKFALLPGGELPAEFDHRAREGLLTVNLDQSPLPLFLRFKACLLLLHGHYIEDE DASEDDKDDEWMGAKRLFCDIWYVQNGLYVGHGSCKYQLPAVLGFKEHVYFLESSISLNLPETDENVSQLHFEFKITGKY WDVKDFGLQLFEDPDVRDDHVCCGDTYKETADINIRENLHAGTM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |