Names & Information
Knowledge of BnaC05G0556500ZS:
| Gene Name | BnaC05G0556500ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA05g33170D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3561 nt ATGGCTCTTTCTACTTTGTCTCGTCATTGTAAACACCATGTCTTTCCTAGCTTCCACGGGCCAGATGTCCGTAGAGGCTT TCTCAGCTACTTACTGAAGGAGTTCAAAGAGAAAGCAATCGACGTCTTCATAGACAATGACATAGAGAGGAGCAAGTTGA TTGGTCCCGAGCTCACAGAAGCTATAAGAGGATCGTTAATTGCAATTGTCTTGATCTCGAGGAACTACGCTTCATCAACA TGGTGTCTGAACGAGTTGGTGGAGATCATGAAGTGCAGGGATGAAGATAACCAGACGGTGATGGTGATTTTCTATGAAGT GGATCCATCTGACGTGAAAAAGCAGAAGGGTGACTTTGGCGCTGTCTTTGATAGAACTTGTGCAGAGAAATCAACGGAGG AAGTTGAGAGATGGAGACAAGCTTTGCAGATTGTGGCTCAACTCGCTGGTTACCATACAAGTAACTTTGATGATGATGCG GTCATGACTGCAAAAGTTGTTACCGATATTTCGAAAAAGTTCAACGATTCTACAACATCAAATGATTCCAGCAACTTGGT TGGGATTGGAACTCATATTAAGGAGATAGAGTCATTGTTGTCCTTAGAATCCGATGAAGTCCGGATGGTTGGTATCTGGG GTCCTTCTGGAATTGGTAAGACGACCATCGCCAGAGCTTTATATGGAGAGCTCTCTAGTAAGTTTACACATGCTGCTTTT ATTGAGAGTACCCAAGGGAAGTTTGAGCAAAACTATCGAGACGAGCACGCCTTCATGTTGCATTTACAAGAACAACTTTT GTCTAAGACCTTAAATCAGAAAGATGTAAAAATAGGTCATCTGGGTGTGGCAAAAGCAAGGCTGAAGGACAAGAAAGTGC TTGTCGTTCTTGATGATGTGGATGACTTAAAGCAGCTAGAAGCCATGACTGACCAAACTTGCTGGTTTGGGCCTCAAAGT AGGATTATCATCACGACAAAGGATAAAAAGCTTTTGGTAGCACATGAGATCAACCATATTTACCAAGTGGGTTTTCCATC TACATCTAAAGCTCTTGAAATTCTCTGTCTGTCTGCTTTTCGTCAAAATTCACCTTCATCTGGGTTTGAGGACATGGCCA TAGAAGTTACACGGCTTGCCGGTCGTCTTCCTTTGGGTCTACGTGTTTTTGGCGCATATCTGCGAGGAATGTCCAGAGAT CAGTGGATACATGCATTGCCTCGACTTAGGACGAGTCTGGATGGGGAGATTGGGAAAGTATTAAGGGTCAGCTATGAGGC TTTATGCGAGGAAGAGCAAGAATTGTTTCTTCATATAGCATGTTTTTTCAAAGGTGGGTGCACTAGTGACGTGGTGGAGT GTCTTGCGGAAAGTCGTTTAAACGTCAACCACGGGCTCCAAGTGTTGTTGGATAAATGTTTCATATCTATACACGGACGG CGACTGTTGGTGGTGCATAATTTGCTGGAACAATTGGCTAAAGAAATTGTTCGTAAACAGTCGGTTTCTGATCCTGGGAA ACGTCAGTTCTTGCTGGATGCTCAGGACATTTGTGATGTGCTTGAGGAAAATGCTGGCTCTGAAACTATTATAGGAATAT GTTTTGACTTATCGGAAGTCAGGGGAGACTTAATTATCGGCGAGCGAGCCTTTGAAGGGATGTCTAGGCTCCAGTTCGTA AGATTCCAGAAATGGGGTTTGTATAACAACACCAAACTTCTCTTACTCCAGGGTCTGAAGTTTAGAGCTAGTAAACTTAG ATTTCTTGAATGGGATCAGTTTCCGCTGACACGTTTTCCTCGTGAGTTTCAACCGCGGCGCCTTGTCAAACTTAAGATGG AGGACAGCAAGCTTGAGAAGCTGTGGGAAATACCTATTCCACTCCCGTGTCTGACTTTGATGGTGCTGTCTTATTCCAAC AACCTCAAAGAACTTCCGGATCTGTCTAATGTCACTAGTCTTAAGATACTGAATGCTAGTTTTTGCTCAAGTTTGTCAGA GATCTCCTCCTTTGGGAAGTCCACTAGTCTCCAGGAATTGCATCTCCCTGGTTGCTCCAAGTTGATAGTGATCCCCTCAT CCATTGGGAATGCCATTAATCTCAAGACGTTGAATGTCGAGCATTGCCGGGGTCTGGTACAACTCCCATCCTCTATTTGG AGCCTCAAGAAGTTAAAGAAACTGGCAATTGCAGGATGCGCAAAGCTGAACCATTTGGGGTCACAGTTGAGAAGCTTTCC TGATATTTCCGGAAACATTACAGAATTCGATATCAGTTATACAGCGATAGAAGAGTTTCCTTCATCAATCATGGCTTTTT CGTGTCTTCGTGAACTCGCAACAACGAGTGCCAAAAGCTTCAAGGTGTTTCCAGATGTTCCTGACACCATCGAAGTGTTA AATTTGCGCAATACGGGAATAGAAGAAATTCCTCCGTCGATTCAGAATCTCTCACGTCTCACTGAACTGAGCATGCGTCG CTGCGAGAAGCTAAAGGTCCTTCCAACCAACGTCAACCTGCAATCTCTCGCTTCACTTGATCTCAGTTCCTGCCCACAAT TGAGAACGTTTCCGGAGATATCTACAAGCATTAGTTATCTTAATCTGAGCGATACTGCTATAGAAGAAGTCCCTTCATCC ATATGGTCTTGGCTCCGCCTTTGTTACCTGGACTTGCAAGATTGCCGCAGCCTTCGGGTGTTCCATAGTTTTCCTGACAA CATCGAAGAGTTGCGCTTGAGAAATACGGGAACAGATTTCTTAGGTGGTTATTTAGGTATAAACCTCAAAGGGTGCAAGA GTCTTGTGTCATTGCCCCACTTTCCGTATTTCGTATCGCTTCTTGGTGCATCTAACTCTAAAGCTGATGAGGAACGGAAT GGACGTCCTAACTACCGACCTATTATTGATCATGATGGTCTTCCGAGACAACGCTTATCAAATCAGGATATGAATAATAT GAAGACAAGAGAAGAGCTATTAGCTGAAGAGAGAGACTACAAGCGTCGAAGAATGTCATACCGTGGTAAGAAGGTCAAAC GAACGCCTCAACAGGTGTTGCGATATATGATAGAAGAATTTACAGAAGAAGTTAAGCTAGCAGGAGGTATTGGATGTTTT GAGAAGGGAATGCCATTACACTCCTTGTCTTCTATAGGCAATGATCAGAAAGAAAGCGACTCTCGATACAATTCTATATC AACAACATTAACAGACGCATCACCAAGATCCTATAAGCAACGGAAAGGAGAGAATAGAGAATATCCAATGGAGAGTAGAA CCAATCCAGATAAAAGAAAGCGGTATGAGGAATATGATTCAGGCAGCTCAAAGAGTCACAGATCATACAAGCACAGTGAT AGACGAGATGATGAATTCACAAGGACCAAACGATGGAGCCACGAAAGGAAATCTTATCATCAAAAGCACAGATCATCTCG TGAAAAGAGTTCTTCAGATTACAAGACCAAAAGGGATGATCGCTATGACAGCCGCCACAGTCGAGAACCTAGTAATCAAA ACTCGTTTGAAGATAGATACAATCCATTTGAAAGAGATTGA |
| AA seq | Len:1187 aa MALSTLSRHCKHHVFPSFHGPDVRRGFLSYLLKEFKEKAIDVFIDNDIERSKLIGPELTEAIRGSLIAIVLISRNYASST WCLNELVEIMKCRDEDNQTVMVIFYEVDPSDVKKQKGDFGAVFDRTCAEKSTEEVERWRQALQIVAQLAGYHTSNFDDDA VMTAKVVTDISKKFNDSTTSNDSSNLVGIGTHIKEIESLLSLESDEVRMVGIWGPSGIGKTTIARALYGELSSKFTHAAF IESTQGKFEQNYRDEHAFMLHLQEQLLSKTLNQKDVKIGHLGVAKARLKDKKVLVVLDDVDDLKQLEAMTDQTCWFGPQS RIIITTKDKKLLVAHEINHIYQVGFPSTSKALEILCLSAFRQNSPSSGFEDMAIEVTRLAGRLPLGLRVFGAYLRGMSRD QWIHALPRLRTSLDGEIGKVLRVSYEALCEEEQELFLHIACFFKGGCTSDVVECLAESRLNVNHGLQVLLDKCFISIHGR RLLVVHNLLEQLAKEIVRKQSVSDPGKRQFLLDAQDICDVLEENAGSETIIGICFDLSEVRGDLIIGERAFEGMSRLQFV RFQKWGLYNNTKLLLLQGLKFRASKLRFLEWDQFPLTRFPREFQPRRLVKLKMEDSKLEKLWEIPIPLPCLTLMVLSYSN NLKELPDLSNVTSLKILNASFCSSLSEISSFGKSTSLQELHLPGCSKLIVIPSSIGNAINLKTLNVEHCRGLVQLPSSIW SLKKLKKLAIAGCAKLNHLGSQLRSFPDISGNITEFDISYTAIEEFPSSIMAFSCLRELATTSAKSFKVFPDVPDTIEVL NLRNTGIEEIPPSIQNLSRLTELSMRRCEKLKVLPTNVNLQSLASLDLSSCPQLRTFPEISTSISYLNLSDTAIEEVPSS IWSWLRLCYLDLQDCRSLRVFHSFPDNIEELRLRNTGTDFLGGYLGINLKGCKSLVSLPHFPYFVSLLGASNSKADEERN GRPNYRPIIDHDGLPRQRLSNQDMNNMKTREELLAEERDYKRRRMSYRGKKVKRTPQQVLRYMIEEFTEEVKLAGGIGCF EKGMPLHSLSSIGNDQKESDSRYNSISTTLTDASPRSYKQRKGENREYPMESRTNPDKRKRYEEYDSGSSKSHRSYKHSD RRDDEFTRTKRWSHERKSYHQKHRSSREKSSSDYKTKRDDRYDSRHSREPSNQNSFEDRYNPFERD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |