Names & Information
Knowledge of BnaC06G0017400ZY:
| Gene Name | BnaC06G0017400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: probable disease resistance protein At1g12280 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=3 SV=1 |
| NT seq | Len:2211 nt ATGCCTGTTCAACCCACCATTGTTGGTCAAGAAACAGTGCTTGAAAGGGTATGGACTCGTCTCATGGAAGAAGGAGTCGA GGTTGTGGGTATGTATGGCATGGGTGGAGTGGGCAAAACCACCCTTCTCACACAAATCAACAACAAGTTTACTGAAACAA ATGGAGGATTCGAGGTTGTGATATGGGTTGTGGTGTCTAAAAGTCCAGAGAACCATAGGATTCAAGGAGTCATTGCCAAA AAGCTAGGCCTAGAGGGAGAGGGGTGGGACCAAAAAAATGAAAACCAGAGAGCCCTTGAGATACACACTGTCCTCAAGAG GAGAAAGTTTGTGTTGTTGCTGGATGATATATGGGAGAAAGTGAATTTGAAAGCGGTTGGAGTCCCACATCCAAGCAGAC AAAATGGATGCAAATTAGCTTTTACTACTCGTTCTAGAGATGTGTGTGGGCGTATGGGGGCTGATGACCCTATCGAAGTC AGTTGTCTAGAACCAGAAGATGCTTGGGATTTGTTTAAAACAAAAGTTGGAGAAAACACACTGAAAGGCCATCCAGACAT CCCTCAGCTCGCTAGAAAGCTCGCTGGAAAATACTGTGGTCTACCATTAGCACTTAATGTCATTGGCGAGACCATGGCAT GCAAAAGGACGGTGCATGAATGGCGTTCTGCTATTAACGACTTGAGTTCATATGCTGCAGAGTTTTCTGGCATGGAAGAT GAGATTCTTCCGATCTTGAAGTACAGCTATGATAATTTAAACTCAGAACAGGTGAAATCATGCTTCCTGTATTGCTCTTT GTTCCCTGAAGATCACCGTCTGGAAAAAGAGAGGCTTATAGACTACTGGATGTGTGAGGGGTTCCTAGATGAGAACCAAA GTCGAGAAAGAGCATTAAGGCACGGCTATGAGATCATTGGTGTGCTTGTACGTGCACGTTTGTTGTTGGAGGAAGTTATC AATAAAGAACAAGTGAAAATGCATGATGTGGTTCGGGAGATGGCTCTATGGATAGCATCTGATCTTGGGAAGGATAAAGA AAAATGTATTGTGAAAGCCAGAGGCGGGTTATGTGAGATACCAAGAATCAAGAACTGGAGTGCTGTGGTAAGGATGTCTC TCATGGAAAATGAGATTGAGATGGTCTCTGGCATCCCTGAGTGCTCCAAACTTACAACTCTCTTCCTTCAGAAAAACGAT TCACTGATACATATCTCACCTGATTTCATCCGGTGTATCCCTACGCTCGTTGTCTTGGATCTGTCCGGGAACTCAAGTCT CCGGAAACTGCCTGAACAAATATCAGAGTTGGTGTCCTTGCGATATCTTGACTTGTCATGGACATGCATTAGGCGGCTAC CTCTTGGTTTGCTAGTGTTGAAAAAGCTCATACATTTGAGGTTGGATTACATGAAGAGGCTTAAGAGTGTTTCAGGGATA TCAAAGTTGTTGAGTTTGAGGAAACTGCAACTACTACAGTCTAAAATGTCCCTAGACATGAGCTTAGTGGAGGAGTTGCA GCTCTTGGAACATTTACAAGTTCTCAACGTAAGTATCAAGTCGAGTTTGGTTGTGGAGAAGTTGTTATATGCTCCCAGGT TGGTGAAATGTCTTCAAGTTGTACTACTTAGAGAGCTTGAGGAAGAATCACACAGAGTATTGGCTTTCCCAGGTATGGAT AGTCTCCGTAAACTCATCATAAGGATGTGTGAAATGTGGGAGATAAAGGCAGAGAGGAAGACTTTATCATCAACTCAAGG CTTCCCAAACCTCTCTAGTGTGCATATAAGCAGCTGCAATGGTCTGAAGGATTTAACGTGGCTTCTGTTCGCTCCAAACC TCACTAGTCTTGAGGTTCTGGACTCAGGAGTATTAGAAGCAATAATAAGCCAGGAGAAAGCTACGAGTGTTGTCATTCCT TTCCAGAAACTAGAGAGTCTACGCTTACACAATTTAGCAACGTTGAAGAACATCTATTGGGCACCTCTGCCTTTTCCATG TCTAAAGACAATCCACGTAACAGAGTGTCCAGAGCTTAGAAAGCTCCCATTGGATTCTCAAAGTGTCTCCAGGGTTGAAG AGTTTGCTATTAAATACAAAGAGGAAGAATGGTTTGAAAGGGTCGAATGGGATGATGAAGGCACTAAACTCCGTTTCTTA CCTTTCTTCAAGTTCTTTGGACCTGAATGGCAAGTTACCTATGTGCGGTAA |
| AA seq | Len:737 aa MPVQPTIVGQETVLERVWTRLMEEGVEVVGMYGMGGVGKTTLLTQINNKFTETNGGFEVVIWVVVSKSPENHRIQGVIAK KLGLEGEGWDQKNENQRALEIHTVLKRRKFVLLLDDIWEKVNLKAVGVPHPSRQNGCKLAFTTRSRDVCGRMGADDPIEV SCLEPEDAWDLFKTKVGENTLKGHPDIPQLARKLAGKYCGLPLALNVIGETMACKRTVHEWRSAINDLSSYAAEFSGMED EILPILKYSYDNLNSEQVKSCFLYCSLFPEDHRLEKERLIDYWMCEGFLDENQSRERALRHGYEIIGVLVRARLLLEEVI NKEQVKMHDVVREMALWIASDLGKDKEKCIVKARGGLCEIPRIKNWSAVVRMSLMENEIEMVSGIPECSKLTTLFLQKND SLIHISPDFIRCIPTLVVLDLSGNSSLRKLPEQISELVSLRYLDLSWTCIRRLPLGLLVLKKLIHLRLDYMKRLKSVSGI SKLLSLRKLQLLQSKMSLDMSLVEELQLLEHLQVLNVSIKSSLVVEKLLYAPRLVKCLQVVLLRELEEESHRVLAFPGMD SLRKLIIRMCEMWEIKAERKTLSSTQGFPNLSSVHISSCNGLKDLTWLLFAPNLTSLEVLDSGVLEAIISQEKATSVVIP FQKLESLRLHNLATLKNIYWAPLPFPCLKTIHVTECPELRKLPLDSQSVSRVEEFAIKYKEEEWFERVEWDDEGTKLRFL PFFKFFGPEWQVTYVR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At1g12280; K13459 disease resistance protein RPS2 (A) |