Names & Information

Knowledge of BnaC06G0045000ZS:

Gene Name
BnaC06G0045000ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
disease resistance protein [Brassica rapa subsp. pekinensis]
Best Hit (SwissProt)
Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1
NT seq
Len:942 nt

ATGGGAGGCTGTCTATCAATATTACCATGGGGTCAAGCGGTAGATATATCCTGCAACTGCTTACTTGGGGATGGAAATTA
CATTCATATGATGAAGGATAATCTTGAGGCTCTGGAGGGAGCTATTCAAGAACTTCAACGTAAGCGAGATGACCTGTTAA
GAAATGTCTCCATAGAAGAAGATAAAGGTTTGGAGCGGCTTGCTCAAGTAGAAGGATGGTTGTCAAGTGTAGAAAGTCTT
GACTCTCAGGTCAGTATTCTGCTTGAGCATAAACCAATTGAAATCAATAGATTGTGTCTTTTTGGATATTTTTCCGAAAA
TTGCATATCAAGCTATGAGTATGACAAAGAGGTATCGAAGAAGTTGGAAGAAGTTACAAAGCTTATATCTAAAGGAGATT
TTAAAGATGTGGCCGGAAAAAGACCTTTACCAAAGGTGGAGAAGAAGAAACGTATCCAAACAACAGTAGGTTTGGATTCA
ATGGTTGGAAAGGCATGGGACAGCATCATGAAAACTGAACGAAGAACGTTAGGTATATATGGCATGGGGGGAGTGGGAAA
AACAACCCTCTTAGCTACTATCAAAAACAAATTCAAGGATGAATTTGATGTTGTGATATGGGTTGTGGTCTCTAAAGATT
TGCAATACAAGGGCATTCAGGATCAGATTCTAAGAAGATTACGCGTTGACAAGGAATGGGAAAATCAAACAGAGGAGGAG
AAAGCATTTTCCATAGACGATATCCTAGGAAGAAAGAAATTTGTTCTGCGGTTAGATGATCTGTGGAGCGAGGTAGATTT
GGACAAGATTGGAGTTCCACATCCAACTCAAGAAAATGAATCGAAGATAGTTTTCACCACTCGTTCAAAGGAAGTTTTCA
GATACATGAGAGCTGATGATGAACTGAAAATGGATTGTTTGTCAACGAGTGAATCGTGGTAA
AA seq
Len:314 aa

MGGCLSILPWGQAVDISCNCLLGDGNYIHMMKDNLEALEGAIQELQRKRDDLLRNVSIEEDKGLERLAQVEGWLSSVESL
DSQVSILLEHKPIEINRLCLFGYFSENCISSYEYDKEVSKKLEEVTKLISKGDFKDVAGKRPLPKVEKKKRIQTTVGLDS
MVGKAWDSIMKTERRTLGIYGMGGVGKTTLLATIKNKFKDEFDVVIWVVVSKDLQYKGIQDQILRRLRVDKEWENQTEEE
KAFSIDDILGRKKFVLRLDDLWSEVDLDKIGVPHPTQENESKIVFTTRSKEVFRYMRADDELKMDCLSTSESW*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0006952
Pfam
NB-ARC domain
KEGG
RGA-3; probable disease resistance protein At1g15890; K13459 disease resistance protein RPS2 (A)