Names & Information
Knowledge of BnaC06G0049800ZS:
| Gene Name | BnaC06G0049800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=3 SV=2 |
| NT seq | Len:1854 nt ATGGGAGACTGTCTATCAGTATTACCATGGGGTCAAGCGGTAGATATAGCCTGCAACTGCTTACTTGGGGATGGAAATTA CATTCATATGATGAAGGATAATCTCGAGGCTCTGAAAACAAATATGCAAAAACTTAGAGAAAGGCGAAATGATATTGCAA CAAGAGTTTCCATAGAAGAAGATAAAGGTTTAGAGCAGCTTGATCAAGTAAAAGGATGGCGTTCAAGGGTAGCAAGTATT GACTCTCAGGTCAGTTGTCTGCTTGAGGATGAACCAGCTGAAATCAATCGATTGTGTCTTTTTGGATATTTTTCCGAAGA TTGCATATCAAGCTATGAGTATGGTAAAGAGGTATCAAAGAAGTTGGAAGATGTTAAAGAGCTTTATTCTGCAGGAGATT TTAAAGATGTGGCTGGAAAAAGGCGTGCAGCAAAGGTGGAAACGAAACGTATCCAAACAACAGTGGGTTTGGATTCGATG ATTGGAAAAGCATGGGACAGCATCATGAAACCTGAACGAAGAACTTTAGGTATTTATGGAATGGGGGGAGTGGGGAAAAC AACCCTCTTAGCTACTATCAACAACAAATTTGACGAAGAGGTGAATGAATTTGATGTTGTGATATGGGTTGCGGTCTCTA AAGATTTGCAATACAAGGGCATTCATGATCAGATTCTAAGAAGATTACGTGTTGACAAGGAATGGGAAAATCAAACAGAG GAGGAGAAAAAAAAATTAATAGAGAATATCCTAGGAAGAAAGAAATTTATACTGCTGTTAGATGATCTGTGGAGCGCGGT AGATTTGAACAAGATTGGAGTTCCAAGTCCAACTCAAGAAAATGGATCAAAGATAGTTTTCACCACTCGTTCAGAAAAAG TTTGCAGCGACATGGAAGCTGACGATGAGCTGAAAATGGATTGTTTGCCAACGACTGAAGCGTGGGAACTGTTTCAAAAT GCAGTTGGAGAAGTCCGATTAAAGGGGCATCCAGATATTCCCACACTTGCAAAAAGAATTTCTGAAAAATGTTATGGCTT GCCGCTTGCACTCAATGTGATTGGCAAAGCCATGAAATGTAAAAAGGATGTACATGAATGGCGTGATGCAATTGATGTTC TCAATACGTCTAGCAGCGAGTTTCCAGGTATGGAAGAAAATATTCTTTCAGTTTTGAAGTTCAGCTATGATGGTTTAGAG GATGAAAAGGTGAAATCATGCTTCATGTATTGTTCTTTGTTCCCGGAAGATTATCAAATAAATAAGGAGGAGTTGATAGA GTATTGGATTGGCGAAGGATTTATAAAGGGAGAGAGAGATGAAGATGGAAATAACAACAAAGGTCATGCTATAATTGGTT CGTTGGTTCGTGCGCATCTATTGATGGAGTGCGAAACTAAATCCACTCTTTTCGAAATTGGATTACTACCTGCGGTGAAA ATGCATGATGTGTTACGTGAAATGGCTCTTTGGATAGGGTCTACTTCTGGAAAAGAGGAAGAAAAACAGTGCGTCACATC CGGTGTGAAGCTAAGCCGTATACCAGATGACATCAACTGGGATGGTTGGAGAAGCTTAGCTTTGAAAAAGTCTACCAGAC TGAGCAGTAATGAAGTGAGGAATGCTCAAAAGAAAATAGCAGATCAGAATCTGAAGATATCTGTCAGAGTAGAAACAGAG GCAGCGGAGTCTGCAGCATTAGATGGGAAGACATTCTGTTTTATTCAGCTTGATGTAGGTCTTGATGCAGCTGCCGTGCG AGAGTCTGTTTCGAAAGTTGTGGAGAAGAAGGGGATGTCGATAATGGTGTTCAGCACAGATGAAATAGCCAACAAGGCGG TTGTGTGTACATGA |
| AA seq | Len:618 aa MGDCLSVLPWGQAVDIACNCLLGDGNYIHMMKDNLEALKTNMQKLRERRNDIATRVSIEEDKGLEQLDQVKGWRSRVASI DSQVSCLLEDEPAEINRLCLFGYFSEDCISSYEYGKEVSKKLEDVKELYSAGDFKDVAGKRRAAKVETKRIQTTVGLDSM IGKAWDSIMKPERRTLGIYGMGGVGKTTLLATINNKFDEEVNEFDVVIWVAVSKDLQYKGIHDQILRRLRVDKEWENQTE EEKKKLIENILGRKKFILLLDDLWSAVDLNKIGVPSPTQENGSKIVFTTRSEKVCSDMEADDELKMDCLPTTEAWELFQN AVGEVRLKGHPDIPTLAKRISEKCYGLPLALNVIGKAMKCKKDVHEWRDAIDVLNTSSSEFPGMEENILSVLKFSYDGLE DEKVKSCFMYCSLFPEDYQINKEELIEYWIGEGFIKGERDEDGNNNKGHAIIGSLVRAHLLMECETKSTLFEIGLLPAVK MHDVLREMALWIGSTSGKEEEKQCVTSGVKLSRIPDDINWDGWRSLALKKSTRLSSNEVRNAQKKIADQNLKISVRVETE AAESAALDGKTFCFIQLDVGLDAAAVRESVSKVVEKKGMSIMVFSTDEIANKAVVCT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | NB-ARC domain |
| KEGG | RGA-3; probable disease resistance protein At1g15890; K13459 disease resistance protein RPS2 (A) |