Names & Information
Knowledge of BnaC06G0058800ZS:
| Gene Name | BnaC06G0058800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g04820D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=3 SV=2 |
| NT seq | Len:2577 nt ATGGGAGGCTGTGTAGCACTAAATTTCTCATGTGATCAAGCGGTGAATCAAACCTGCAGCTGCTTATTTGGTAATAGAAA TTACATTTATATGATGAAGGCTAATCTCGAGGCTCTGGAGACAGCTAGGCAAAAACTTCAAGAAAGGCGAGAGGATCTGT TAATAAGAGTTTCCATAGAAGAAGGTAGAGGTTTGGAGCGGCTACCTCAAGTTGAAGGATGGTTTTCAAGGGTAGCGAGT ATTGACTCTCAGGTCAGTGATCTGCTTAAGGTTAAACCAACTGAAATCAAAAGATTGTGTATTTTTGGATATTTTTCCAA AAAATGCATATCAAGCTGTAAGTATGGTAAAGACGTATGGAAGAAGTTGGAAGAAGTTAAAGAGCTTCTGTCTGAAGGAG TTTTTGAAGAGTTGGCCGGAAAAAGACCTGCACCAAAGGTGGTGAAGAAAGTTATCCAAACAACAATAGGTTTGGATTCA ATGGTTAGAAAGGCATGGGACAGCATCATGAAACCTGAACGAAGAACTTTAGGTATTTATGGCATGGGGGGAGTTGGGAA AACAACCCTCTTAGCTCGTATCAACAACAAATTCAACGAAGAGGTGAATGAACTTGATGTTGTGATATGGGTTGTGGTCT CTAAAGATTTGCAATACAACGGCATTCGGAATCAGATTCTAGGAAAATTACGTGTTGACAAGGACTGGGAAAAGGAAACA GAAGAGGAGAAAACATCTTCCATAGACAAAATCCTAGGAAGAAAGAAATTTATAGTGCTATTAGATGATCTGTGGAGCGA GGTAGATTTGGACAAGATTGGAGTTCCACGTCCAACTCAAGAAAATGGATCAAAGATAGTTTTCACCACTCGCTCAAAGG AAGTTTGCAGATACATGGAAGCTGATGATGAGTTAAAACTTAATGTTTTGTCAACGAATGAAGCGTGGGAACTGTTTCAA AATGTAGTTGGAGAAGTCTCATTAAAGCGGCATCCAGATATTCCCACACTTGCAAAAAAAATTTCTGAAAAATGTTATGG CTTGCCACTTGCACTCAATGTGATTGCGAAGGCCATGTCATGTAAAGAGGATGTACATGAATGGCGTCATGCAATTGATG TTCTCAATACATCTAGGCACAAGTTTCCAGGTATGGAAGAAAAGATTCTTTCAATTTTGAAGTTCAGCTATGATGGTTTA GAGGACGAAAAGGTGAAATCATGCTTCCTATATTGTTCTTTGTTCCCGGAAGATTATGAAATAAAGAAGGAGGAGTTGAT AGAGTATTGGATCAACGAAGGATTTATAAATGGAAAGAGAGATGAAGATGGAAGTAACAACCAAGGTCATGTTATAATTG GTTCATTAGTTCGTGCGCATCTATTGATGGAGTTCGAAAAAGAATTCACACCCGCTGTGAAAATGCATGATGTGCTACGT GAAATGGCTCTTTGGGTAGGGTCTACGTTTGGAAAAGAGGAAGAAAAACAGTGCGTCAAAACCGGTGTGAAGCTAAGCTT TATACCAAAGGACATCAACTGGTCAGTTTTGAGAAGGATCTCATTGGTGAGTAATCAAATTGAACAGGTATCTTGCTGTC CCAAATGCCCCAACCTTTCGACTCTATTTCTCGGGGATAACAAGTTGGAGGGTATATCAGATAAATTCTTTAAGTTTATG CCAGCCCTTGTCGTCTTGGATCTTTCGCGTAACCGTGATCTTAGTGAATTGCCGGAAGGAATTCGCAGCTTGACTTCCTT GCGATACCTCAATTTATCACACACACGTATAAGTTCGTTATCGGTTGGTTTGAAGAGGTTGAGGAAACTAATAAGCCTAG ACCTGGAGTTTACCTGGCTTGAAAGCATTGATGGAATAGGAACAAGCTTACCAAATCTTCAGGTGTTGAAACTATATCGT TCTCCTGTTTTTATTGATGCACGTTCAATTGAAGAGCTTCAACTTTTAGAGCACTTGAAGATTTTAACAGGAAACGTGGT AGATGCTTTAATGTTGGAAAGTATCCAAAGAGTTGAGCGATTGGCGAGTTGTGTTCAACGCCTTTGGATTATCAATTTGT CTGCCAAGGTTGTAACATTTAACACGGTAGCTCTGGGTGGTCTTCGAGAACTTGATATTGAGTTGTCCGGAATCTCAGAG ATAAAGATAGACTTGAAAAGCAAAGAGAAGGAAGATCTTCCATGTAACAGTTCTCCATGCTTCAAGCACCTCTCAAGTAT TTTTTTACGCAGTTTGGAAGGTCCAAAAGAATTGACCTGGTTATTGTTTGCTCCAAATCTCAAGCATCTAGAGGTGGCAT ATTCAGGAAGCCTAGAAGAAATAATAAATAAGGAGAAGGGAATGCGTATTAGCAATGTGCATCCTGATATGATGGTTCCC TTTCAGAAGCTAGAATCCTTCAGTTTAAGGGGTTTGGATGAATTAAAGAGAATATGCTCAAATCCTCCAACTCTTCCATC CCTGAAAAAAATTGTTGTCGAACACTGCCGAAAGCTGCCGAAAGCTGCCACAGAGAGTTTCCGAGACATGAACAGGAATA ATGAAGTTGATGAATGA |
| AA seq | Len:859 aa MGGCVALNFSCDQAVNQTCSCLFGNRNYIYMMKANLEALETARQKLQERREDLLIRVSIEEGRGLERLPQVEGWFSRVAS IDSQVSDLLKVKPTEIKRLCIFGYFSKKCISSCKYGKDVWKKLEEVKELLSEGVFEELAGKRPAPKVVKKVIQTTIGLDS MVRKAWDSIMKPERRTLGIYGMGGVGKTTLLARINNKFNEEVNELDVVIWVVVSKDLQYNGIRNQILGKLRVDKDWEKET EEEKTSSIDKILGRKKFIVLLDDLWSEVDLDKIGVPRPTQENGSKIVFTTRSKEVCRYMEADDELKLNVLSTNEAWELFQ NVVGEVSLKRHPDIPTLAKKISEKCYGLPLALNVIAKAMSCKEDVHEWRHAIDVLNTSRHKFPGMEEKILSILKFSYDGL EDEKVKSCFLYCSLFPEDYEIKKEELIEYWINEGFINGKRDEDGSNNQGHVIIGSLVRAHLLMEFEKEFTPAVKMHDVLR EMALWVGSTFGKEEEKQCVKTGVKLSFIPKDINWSVLRRISLVSNQIEQVSCCPKCPNLSTLFLGDNKLEGISDKFFKFM PALVVLDLSRNRDLSELPEGIRSLTSLRYLNLSHTRISSLSVGLKRLRKLISLDLEFTWLESIDGIGTSLPNLQVLKLYR SPVFIDARSIEELQLLEHLKILTGNVVDALMLESIQRVERLASCVQRLWIINLSAKVVTFNTVALGGLRELDIELSGISE IKIDLKSKEKEDLPCNSSPCFKHLSSIFLRSLEGPKELTWLLFAPNLKHLEVAYSGSLEEIINKEKGMRISNVHPDMMVP FQKLESFSLRGLDELKRICSNPPTLPSLKKIVVEHCRKLPKAATESFRDMNRNNEVDE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At1g15890; K13459 disease resistance protein RPS2 (A) |