Names & Information
Knowledge of BnaC06G0119200GG:
| Gene Name | BnaC06G0119200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein AALP_AA4G026300 [Arabis alpina] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 SV=1 |
| NT seq | Len:3558 nt ATGTTGGTCGAAGGGATAATTCTCTCAGCTTTCTTACAAGCTCTGTTCAAAGCTCTGTTCAAGTCGGTCATGTCATCCAT TTTCGATGAATTCTTCAGGGTCCGAGAAGGGAAGGAGATGAAGGTGATACTTGGGGAGCTGGAAACCAAACTTTTGACTA TATGTGCATGGCTTAGTTATGCCCATGAGGAACAAATTACGAACCAGGCAGTGGAAGATTGGGTCAACAAGCTGAAAGAT GCCGTTTACCATGCAGAAGATGTTCTCGATGATATTTATACAGAAGCTTCGCTCGGCAAAGAAACAATCAGCTTGAAAAT TTTGCTAGATAAGCTTACGAGTGTCAAGATGAAGCTCGACTCTCTAGCCTCAGAGATTGAAGTGTTCTCGCAACTGCCCA CAACGCCAACACACACAAAAAGATTGACTACATCTCTAATAGGAGAACAACGACCAATTGGTAGACAAACAGAAAAGGCG GAAATCTTGAAATTGTTGACAAACGATGACAATAGCAAAATAGAAGTGCTAGCCATTGTGGGCATTGGAGGGGTTGGCAA GACCACACTTGCACAGCTCCTGTACGATGAGGATCATTTTCCATTAAAAGCCTGGATTCATGTGTCAGAGAAGATTGATG TTTTTAGCCTTACCAAGAGAATTTTTGAGGCAGTCACTCGAGGCACATTTCCTTTTGAAGACCTAAATCAACTCCACCTT AAACTGGAAGAAAGATTGAAAAAGAAAAAGTTTCTGCTCGTTCTTGATGATATGTGGAGTGAATCTTTCGAGGACTGGAA TCTGCTATGTCAACCCTTTGCAACTGCTGCTAAGGAGAGCCGAATTATTGTAACAACAAGAAGTCACCATGTCGCGACAA AACCTCTACCATTTGGAGAATGCTGGAGTATTTTTAGAGAACAGGCACTTGGTCCTCAGGAGCATGATCTAAATCGAGAA CTGGGAGAGCTTGCAGAACAAGTAGTGGGCAAGTGCCAAGGCCTGCCTTTGGCTGCGAAAGTATTTGGCGGTTTGTTACG GTCTAGCCGAGAAGGTGAATATTGGAGGGGGATCCTAAACAGTAAGATCTGGACTCTTCCAACTGGTTCAATCAACATAC TCCCTGTTTTACAGGTCAGCTATCATTACCTCCCCCTTCCCTTGAAAAGATGTTTTGCCTACTGCTCCATATTTCCAAAA GGGTACGTCTTCGAAAAGGAAAGGGTAGTTCTTTTGTGGATGTCGGAGGGACTCTTGCATAAGGATGAAGGAAACACAGA GAGGATGGAAGCGGTTGGAGATGAATACTTTTCAGAACTAGTTTCAAGGTCTCTTTTCCAACGAGACATTATTGCTACAT CAAAGTTTACTATGCATGATCTTATCAACGAGTTGGCTCAATTTGCAGCGGGAGAGTTCTGCTTCAAGTACGAGAATCAA ATTCAAGGAATGTCAGGAAAAACCAGGCACTTATCCTATTTACGTGACCAATATAGTGGTGAGGCTATGAAGTTTGAGGT ACTGCACGGGGTAAAGTCTCTGCGAACTTTTCTTCCTTTGAGCCTTAAAGATTCTTCTCAAACCTGCTGCTTAAATAATA TGGTCAGAGATAAGTTGCTTCGGGGTCTTACCTGCCTGCGTGTATTGTCTTTGTCCCATTATAAATTCACCCTGCTGCCC TCAGATATTTTCAAGAGAATGAGGCACATCCGGTACTTAGACCTCTCTAGAACTTATCTCAAGACTCTTCCAACATCGGT TGGTTTCCTGTACAATCTCCAGACTCTTCTACTGTCTTACTGTCCCAATCTGATCCAACTGGAAGAAACAATCTGCAATC TTATCAGCCTGACGTATATTGATCTGACAGCAACGAAGTTGAACCAGATGCCAAAAAGCTTTGGTAAACTGACGAGGCTC CAGACACTTACAACTTTCGTTGTTAGTGATGGCAAAGGGGCGGCCATTTCGGCACTTAAAGATCTTACAAAGCTTCGCGG AAAACTTGCAATCCTCGAGCTGCATAGAGTTAAGGGAATTAGCGATGCAGAAGAAGCAGACTTGGAGGGCAAGACCCATC TGAAAGAGATAAACTTTACTTGGAGAACATCAGATCCTGTCATGGGCATTATATCAGGGACGCGTAATGAAGATGCCCTC TTTGACATGTTACGCCCACATAATAAGATAGAGAAACTCACCGTAGACAAATATTATGGAAATAGTTTCCCGCGGTGGAT GAGTGACCCTTCATTCTCTAGCATCGTATATTTAAGTCTCAGTGAATGTCAAAGGTGTACGTCTTTGCCATCTCTTGGTC GACTAGCAGGTCTCAAAGAGCTCCACATTTCAAACATGAGGGATCTGGTAAGAATAGGTCCAGAGTTTTACACAAGCAAT CCTAAATCGCAGGGTCAAGATCAGCAGCCGTTTTGGTCCCTTGAGATGTTGACGTTTGAAGACATGCCAAACTGGGCAGA GTGGGCAGATGTAGAGGTCTACGGAGGAACGCTGTTCCCTATGCTCCAGAAACTTTTCATAGTAAGTTGTCCAAAACTGA CCAGTGCTCCACCGGGCCTTTTCCCTTGTCTACTCTCTCTTCATACTTGTAAGAGCGAAAGTATAGTTGTTCAGCTGGAT GCCCCCAATGACCTAGTTTCGCATGAACTGTTTCACTCATCGCCAGTGTCTTTGTTCTGTTCCATCATCATTTACCACCC AAGAGGAGGAGCTGTAGGAAGAAGATTGTCAAGCCCTAACAATGGTTTTGGTCTTGCATCCATACTCAACCAGACTCCAT TCCTTATCCAATCCACTTCTCATTTCTCCTCTTCGTCCGGCGCCGCTGGCCGTGGCCGTGGCCGTGGTTCCGGATTCCCC GCCGCTGGAAAGGGACAGTTCGGTATCAATAGTGAACCGGAAATTGCTAAAGTGCCGGTGGCTCGCGGACGTGGCTCGTC GGAATCGCAATCCCCCGGAGGTTATGGTCACGACCGTGGCCGTCCGATCCAATCTGATCTGAATCCTCCTCCGTTTACCG CCTTTGTCAGACCAGATTCCACTAGCCTTGGACGTGGAAGAGGTTCCCTTGGATCAGATCCAGTTTCACCTTTCTCTCCT GCGCCTCCTCGCCATCCATCGCAGATGCAGCAACCGCGTTTTCAACCGCCTCCCAGTGATGACTCTCGACGTCCCCAATT GAGCAGGGAAGAGCAACTGCAGCAACCAGCAGAGTCTAAGAACGTATCCAATGCTTTAGGAAGTGGAGAAGGACCTTTTG TGGAAGCCGCTCCACCGCAACAACAAGAAAACCGCGACATTCGCCGCCCTCAGCCGCCACCGCAGCGGCAGAGGCGAGTT CAACCGCCCAAGGATGAAACTCCTCGGCCCCAACTGAGTCCGGAGGAAGCTGGAAGAAGAGCTAGGAGCCAGCTTTCCCA CGGTGAAGCTGAGGGAAGCGGTGGTGTAAGGGGAAGAGGAAGAGGGAGAGGCAGGGGAAGAGGGGGTGAAGCGTGGAGAG ATGATAAGAAAGAAGAGGAAGCTGACAAGAGGCTTTGA |
| AA seq | Len:1186 aa MLVEGIILSAFLQALFKALFKSVMSSIFDEFFRVREGKEMKVILGELETKLLTICAWLSYAHEEQITNQAVEDWVNKLKD AVYHAEDVLDDIYTEASLGKETISLKILLDKLTSVKMKLDSLASEIEVFSQLPTTPTHTKRLTTSLIGEQRPIGRQTEKA EILKLLTNDDNSKIEVLAIVGIGGVGKTTLAQLLYDEDHFPLKAWIHVSEKIDVFSLTKRIFEAVTRGTFPFEDLNQLHL KLEERLKKKKFLLVLDDMWSESFEDWNLLCQPFATAAKESRIIVTTRSHHVATKPLPFGECWSIFREQALGPQEHDLNRE LGELAEQVVGKCQGLPLAAKVFGGLLRSSREGEYWRGILNSKIWTLPTGSINILPVLQVSYHYLPLPLKRCFAYCSIFPK GYVFEKERVVLLWMSEGLLHKDEGNTERMEAVGDEYFSELVSRSLFQRDIIATSKFTMHDLINELAQFAAGEFCFKYENQ IQGMSGKTRHLSYLRDQYSGEAMKFEVLHGVKSLRTFLPLSLKDSSQTCCLNNMVRDKLLRGLTCLRVLSLSHYKFTLLP SDIFKRMRHIRYLDLSRTYLKTLPTSVGFLYNLQTLLLSYCPNLIQLEETICNLISLTYIDLTATKLNQMPKSFGKLTRL QTLTTFVVSDGKGAAISALKDLTKLRGKLAILELHRVKGISDAEEADLEGKTHLKEINFTWRTSDPVMGIISGTRNEDAL FDMLRPHNKIEKLTVDKYYGNSFPRWMSDPSFSSIVYLSLSECQRCTSLPSLGRLAGLKELHISNMRDLVRIGPEFYTSN PKSQGQDQQPFWSLEMLTFEDMPNWAEWADVEVYGGTLFPMLQKLFIVSCPKLTSAPPGLFPCLLSLHTCKSESIVVQLD APNDLVSHELFHSSPVSLFCSIIIYHPRGGAVGRRLSSPNNGFGLASILNQTPFLIQSTSHFSSSSGAAGRGRGRGSGFP AAGKGQFGINSEPEIAKVPVARGRGSSESQSPGGYGHDRGRPIQSDLNPPPFTAFVRPDSTSLGRGRGSLGSDPVSPFSP APPRHPSQMQQPRFQPPPSDDSRRPQLSREEQLQQPAESKNVSNALGSGEGPFVEAAPPQQQENRDIRRPQPPPQRQRRV QPPKDETPRPQLSPEEAGRRARSQLSHGEAEGSGGVRGRGRGRGRGRGGEAWRDDKKEEEADKRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | NB-ARC domain disease resistance protein, putative; K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13] (A) |