Names & Information
Knowledge of BnaC06G0131200ZS:
| Gene Name | BnaC06G0131200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein EUTSA_v10011185mg [Eutrema salsugineum] |
| Best Hit (SwissProt) | Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1 |
| NT seq | Len:4035 nt ATGGCAAACCCTCATTTATCAGATTCTTGGGAAGTGGCGCTTAACCGTTTTCTTGCTACATCTTCAAAATTTGAGGAACT GCCAGGTGAAAATAGCTTTAGCACAATGCTACGGAAATTGAAGTGTTCTTTGCTGGCTGGAACTAAGGTGCTTGCTGATG CGGAACAGAAAGCTTATGATGTTAAAGGAGTAAAGATGTGGCTCACTGAATTCCAAGATGCTTCCTTCTTTGCAGAGAAT ATTCTCGAAGACGTATCAACAAAAGTTTTACGAGACGAAAAATATTATTTATGGACACCAAAACTGGAACTAAACCTTGA TGCTGAGCTCCAGGAAAAGATGGAAGGCGTAGTTGCACTACTGGAACACCTTGTGGGTCAAATTAAAGTGCTTGGACTGT CGGTATATGCACAGTGGAAGCCAAGGTCACACACGAGTCCTCTTTTTCATCACGTAGAAGCAGTTGGGCGAGAGGCAGAT AAGCTAGCATTTACCAACTTGCTACTTTCTGGTGATAAAGTATCCTGTGGAACTCCGAATGTTATCTCAGTTAACGGAAT GCCAGGGATTGGCAAGACTACGCTGGTACAAGCCGTTTACAATGACGAGAGTGTGACCAGGCATTTTGATCATAAAGTGT GGATCAATGTTGGGAAACAGTTTGATGTCTTCAGGGTGACCAAAGACGTTCTCCACAAAGTAAGTTCTGGAGCAGTTAAC ACTGAGGATCATCTATCTTCACTTCAAGTTCAGCTGATGGAAACACTTGCAGGGAAGAGGTTTCTACTTGTTTTAGATGA TTTTTGGTCTGAGAATAGTTCAAAATGGCAACTTTTCCTTACTTCTTTTACTGGCGTATCAGAAGGAAGCAGGATTGTTT TAACTACCCAAAATGATATTGTCAGTTTTGTCAGGAAGGCAGCAGAAACCTACCGGCTGAGGCTGATGACTGATATAGAA TGCTGGGAGCTGATCTGCAGTTCTGTATTTGGGTGTAAGTTAGTAAATTATATAGACCAAGAACTAGAAAGGACTGGCAA AAGGATCGCAGAACAATGTAAGGGCCTGCCATTAGCAGCCACAACTATCGCACGTCATCTCCGGTCCAGGCCAGTTCTTA AAGAATGGAATGATGTGTCAGACAATTTCTTGTACTACACTTCCGGTGTCCTTGAAGTTCTTATGCGGAGCTATGATTCT CTCCCTTGTCACCTTAAGCGATGTTTTGCCTTCTGCTCCATCTTCCCAAAGGGTTACGTATTTAATAGGAATAACTTGGT GCTGCTATGGATGGCAGTTGACCTCGTATACCAACCCGAGAGCAACCAAAGATCGGAAGACACTGGTAACGAGTACCTCG AAGATTTAGTTGCTAGATCTTTTCTCCAGCCATTGGACGACAAGAAAACGTTTACAATGCACGATTTCATGAATGATTTA GCCAAAACTGCTGCAGGAGAGCTTTGCTTCAGACTGGAGGACAACAATTTGTTGCAGATACCAGAGAGGGTCAGACATCT ATCATTTTGTGGAAATCAATGGGGTTCTTCTGTAGCCTACACTCTCACCCGTGGTAACTATCTAAGAACCTTTCTTCCTC TAGTTGTCCCGCCACCACCTTCTGGGTCTTCTGAACTTGCAAAGAACGCTCTATATCCATTGCCAAACTTCTCAGAACAG GCATTGATGTATCTGCGTATTCTTGACTTGTCTCACTACCGTATAACAGTCCTTCCTAAATCATTCGAGGGACTACAGCA GCTGCGATATCTAGATCTTTCCAACACCCAAGTGCAAGAACTTCCAGAGTTTTTGTTCATCCTCCGTAATCTACAGACGC TTTTCTTGTCAAATTGCCGTCAACTCAGAAGACTGACAGCATACATAACAAAACTCATCAGCTTGCGTTATCTGGACCTC TTAGGGACTCCATTAGTAAAGATGCCACAAGGAATTAGTAACCTTCGAAGCTTGCAGAATCTGTCAAATTTTGTTATTGG AAATCTGAGTGGTGCGGGACTCCAAGAACTGAGAAAACTCTCTCATCTTCGAGGGACACTTCACATCTCTGAGCTGCAAA ATGTGGTCTCCGTTGGAGAGGCAAGTAACCCTGGTTTAGGAGAGAAGCCACTCCTCAAGAATTTGGTCCTCACATGGACT ATGGAAACTTCTGGTTCCAATAAGATAAGTTGTGACCAACGTGAGTTGCTTAAAATGCTGCAACCTCATCATAACTTGGA AACGGTTAGCATAAACTCTTATTGGGGTGCGACATTTCCTAATTGGTTGGGAGATATTTCATTCAACAGAATGACGTCTG TCTCTTTGACTAGCTGCAGTCTCTGCATATTGCTGCCGCCACTGGGACAGCTGCCTCACCTCAGGGATCTCAGCATTGAG AAATTCAAGATATTGAAGAAGGTTGGTGTAGAGGTTTTCTACGGTAAGAACGACACATTCTCTTCCCTAGAACCGTTTCA AAACCTTCGGACTCTAAGTTTCTACGAGATGCCAAGATGGGAAGAATGGTGTTGTCCTGAACTAGAAGGTGGGATCTTTC CACGCCTTAATAAACTGACCATAAGAAGTTGCCCCAACCTCAAGAATATTCCAAAGGAGCTCCCAAAATTCACTCACGTT ACTACTATCTGGGATTCCAGTTTACGAAGTGAGGAGTATTATACTACAGAACCATCATTGTCTGAAAAAGATGGTTCTGG AAGTCTGAGAGTACTACATATTGAAGGATGTCCCGGATTACTATATCTGCAACAAAGCTCGTCCCAGAACTATGAAGATA TAGCTGTAGCCACAAAGCCATATCAGGAAGATCACTCATATAGGTTGACTACACTCTCAAGTGATGCTGGTAGCACTTCT GGAAAAAAGATGCCTCAAGAAGACCAAGATGACACGGGTTTAGAGAGTTATAAAGTGACAACAGTTCCTGAGCTAGGAAA TCTTACTGAAAGTCTGAGAGTACTACATATTGAAGGATGTCCCGGATTAATAAATCTGCCCGAGAGCTTGTTGCAAGATT GTCCCGGTCTCGAGGAACTTTTACTCATTGACTGCCATTCCCTGGAGGCCATTCCTGGAGGATACCCTTCCACCACTTTG AAAACCCTGTACATAAGAGATTGCATGAAGCTGGAATTTATACAAAGTCTGCAGACAATGCTCATAATCCCGCAGCTCGA GGATCTCTACATAGGCAGCAGTTGCCGCAATCTCTCTTCATTCCCGTTAGTTCTTTTCCCAAATCTCAAAAGCCTTTCAA TAAGAGACTGTGAGCAATTTAGCTCCTTCACCGTCACCTTGGCTGGTGGTGATGCTGATCTAGCTCTTGAGGCCTTGGAG ATTACGGATTGCCAGAAGCTGGAGTTCTTCCCAGAAGGAGGACTAAGGACACTGAAACTCACATCAATTTTAATCTCAAA TTGTAGGAATCTTAAAGGGCTGCCTGCAAAAATTGCCACCCTCACTTCTCTTGAATCGATTCATATAAACGAATGTCCTA AACTTGAGGCCAATCCATTCTGGGGTTTCCCCAAAAGTCTTCAAACGCTTTGCATCAGTCGCTGTCAAAAGCTCAGACCA AAAGAGAATTGGTTAATGAGTTACCTTGGTAACTTGCGTGATCTTGAGATCGAAGGAGGAAATGATGACACTGAATCATT TCCAGAGGAAGAGCTCCTGCCTCGGGGTCTTTACTCACTACGCATAAGCGAATTCAAAAGTCTCCGGACTCTCAATTACA GAGGACTTGAAGGCTTACCAAAACTGGGGATACTAGAAATCAGCGGATGTGGTATGTTAGAATCACTTCCAGAAGAAGGC CTTCCTTCGTCCCTATCTCTACTGCGCATAAATGATAGTCCTATATTGAAAGAAAAGATTTCTAGACAAGACATGGAATG GTTCAAGATCAGGCATATCCAGTTGGTGGAGATTGATGGTGAACAACTCATGCGTGGAAGGAAGAATACTGAATCTCTCT CTCCTAAGAACATGTATATTACAGAGATGCCCTAA |
| AA seq | Len:1345 aa MANPHLSDSWEVALNRFLATSSKFEELPGENSFSTMLRKLKCSLLAGTKVLADAEQKAYDVKGVKMWLTEFQDASFFAEN ILEDVSTKVLRDEKYYLWTPKLELNLDAELQEKMEGVVALLEHLVGQIKVLGLSVYAQWKPRSHTSPLFHHVEAVGREAD KLAFTNLLLSGDKVSCGTPNVISVNGMPGIGKTTLVQAVYNDESVTRHFDHKVWINVGKQFDVFRVTKDVLHKVSSGAVN TEDHLSSLQVQLMETLAGKRFLLVLDDFWSENSSKWQLFLTSFTGVSEGSRIVLTTQNDIVSFVRKAAETYRLRLMTDIE CWELICSSVFGCKLVNYIDQELERTGKRIAEQCKGLPLAATTIARHLRSRPVLKEWNDVSDNFLYYTSGVLEVLMRSYDS LPCHLKRCFAFCSIFPKGYVFNRNNLVLLWMAVDLVYQPESNQRSEDTGNEYLEDLVARSFLQPLDDKKTFTMHDFMNDL AKTAAGELCFRLEDNNLLQIPERVRHLSFCGNQWGSSVAYTLTRGNYLRTFLPLVVPPPPSGSSELAKNALYPLPNFSEQ ALMYLRILDLSHYRITVLPKSFEGLQQLRYLDLSNTQVQELPEFLFILRNLQTLFLSNCRQLRRLTAYITKLISLRYLDL LGTPLVKMPQGISNLRSLQNLSNFVIGNLSGAGLQELRKLSHLRGTLHISELQNVVSVGEASNPGLGEKPLLKNLVLTWT METSGSNKISCDQRELLKMLQPHHNLETVSINSYWGATFPNWLGDISFNRMTSVSLTSCSLCILLPPLGQLPHLRDLSIE KFKILKKVGVEVFYGKNDTFSSLEPFQNLRTLSFYEMPRWEEWCCPELEGGIFPRLNKLTIRSCPNLKNIPKELPKFTHV TTIWDSSLRSEEYYTTEPSLSEKDGSGSLRVLHIEGCPGLLYLQQSSSQNYEDIAVATKPYQEDHSYRLTTLSSDAGSTS GKKMPQEDQDDTGLESYKVTTVPELGNLTESLRVLHIEGCPGLINLPESLLQDCPGLEELLLIDCHSLEAIPGGYPSTTL KTLYIRDCMKLEFIQSLQTMLIIPQLEDLYIGSSCRNLSSFPLVLFPNLKSLSIRDCEQFSSFTVTLAGGDADLALEALE ITDCQKLEFFPEGGLRTLKLTSILISNCRNLKGLPAKIATLTSLESIHINECPKLEANPFWGFPKSLQTLCISRCQKLRP KENWLMSYLGNLRDLEIEGGNDDTESFPEEELLPRGLYSLRISEFKSLRTLNYRGLEGLPKLGILEISGCGMLESLPEEG LPSSLSLLRINDSPILKEKISRQDMEWFKIRHIQLVEIDGEQLMRGRKNTESLSPKNMYITEMP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | LRR and NB-ARC domains-containing disease resistance protein, putative; K19613 leucine-rich repeat protein SHOC2 (A) |