Names & Information
Knowledge of BnaC06G0173400ZS:
| Gene Name | BnaC06G0173400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA07g15400D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:2751 nt ATGGCTTCTTCTTCTCACCGGATAAGGAAATATCATGTGTTTCCAAGCTTCCATGGCCCGGATGTCCGTAGAAAGTTTCT TAGTCATTTACATTACCACTTTGCAAGCAAGGGAATCACGGTGTTTAAAGACCAGGAGATCGTAAGAGGCCAGACGATTG GACCAGAACTCAAACAAGCAATAAGAGAATCTAGGATCTCGATGGTGGTGCTATCAAAGAATTACGCTTCTTCCAGCTGG TGTTTAGATGAATTGGTGGAAATCTTGGAATGCAAGGAAGCTTGTGGGCAGATGGTGATGACTATTTTTTTACGACAGGA AGTGAAGCAAATATGGAGCAAAGCTTTAACTGATGTCGCAGAAATAGCCGGAGTACATTCTCTAAGTTGGGATGATGAGG CTAAGATGATGCAGAAGATTGTTGCAGATGTTTCCAAGAATCTGAATGTCACACTGTCCAGGGATTGTGACAAGATGATT GGAATATGGGGTCCTGCGGGAATTGGTAAGACAACCATTGCTAGAGCTTTATATAACCAACTCTCTAGCAGTTTTCCACT TAGGTGTTTTATGGGGAACCTCAAGGGAAGCTACAATAAGAGCATAATGGGTGTTGATGACTATGATTCCAAGTTGTGTT TACAAAGCCAACTTCTGTCCAGGATCTTTAACCAAACCGACATGAAGGTACATGATTTATGTGCAATAAAGGAATGGCTA CATGATCAGAGAGTTCTTATCATTCTTGATGATGTAGAGGAGCTAGAGCAACTAGATACCTTAGCGAAAGAAACTTCTTG GTTTGGTCCTGGAAGTAGGATCATCTTTACCATGAAAGATAAAAATATTTTGAAGGCACATGGGATCAAAGAAATTTATC ATGTGGATCTTCCATCCGAAGAAGAAGCTCTTGAGATCTTATGCTTATCTGCTTTCAAACAAAGATCTCCACGGGAAGGT TTTAAAGAGCTTTCACATAGAATAGCAGAGTTTTGTGGTTATCTTCCGCTGGGTCTTTGTGTTGTGGGTTCATCTTTACG TGGAGCAAGCAAGAACGAATGGGGGCATCAATTATATAGGCTAGAAACCAGTCTTGAAAGAAAAATTGGGAATGTACTAA GAGTTGGATATGAAACACTGTTACAGAAAGATCAAGATCTTTTTCTTCACATTGCATGCTTCTTCTACAATGAGAATGTT GATCACATGACAACCCTACTTTCAAAAAGTAACTTGGACGTCAGAAATGGATTGAAGACCCTGGCTGATAAATCTCTTTT GAAGGTATCTACTGATGGGCGGATAGTGATGCACTGTTTACTACAGAAATTGGGTAGACAGATAGTTCTTGAACAGTCTA TAGAACCTGGGAGACGTCAGTTTTTAGTAGAGCCTCAAGAGATTTGTGATGTACTAGCAAATGAAACTGGTACTGGATCT GTCTTAGGTATATCATTTGATATGTCCAAGATCAGTGAGTTCTCTATACGTAGGCGAGCCTTTGCAAGAATGCGTAATCT CCAATTCTTGAGATTTTACATAAATAAGCCAGGCATGCATAAAAAAGTTAGCTTGTTAGACGACATGGAATATCTACCTA GTCTAAAGTTACTAGACTGGAATTCATATCCAAGAAAACGTCTTCCTCCAAAATTCCGACCAGAGTGTCTCATCGAGCTC CGTATGCAATTCAGCAAGCTCGAGAAGCTATGGGGAGGAGTCCAGCTGCTTGTAAATCTCAAGAAGATAGATTTGAGCTA TTCCTTCAAGTTGAAAGAGATCCCAAATCTTTCGGAAACTCCAAATCTCGAGATACTGAGACTTATATTTCTAGGAACAT CAAGCATCTCAATGTACGAAACACAAAGATTAGAGAAGTTCCTCCGACAATTGGCAGGCATTGGTCTAGTCTTACATGGC TTCATATTGGCAGCAGAAAACCTCATGACATTATGTTATGTCCCTGAAAGTTTAAGGAAGCTAGACTTAAGAAACAGTCA TTTTATCACGATTCCAGATTGCGTCATTAGTCTTCCTTTTGTTCAAAGTCTTATCATCCAAAACTGTCGAAAGCTCGTGT CACTACAGGGTCTCCCCCCTTCGCTTTGGTGTCTGGATGCAACTGATTGCAGATCACTCACGACTGTACTTCACACTTTC GGTGATCCGTGTGCAAGTTTTAACTACCGCAACTGTGTGATGTTGGAGGAAGAAGCACGGAGAAGAATCATACAACAATG GGATTATAATTATTTATGCTTACCGGGTAAAGAAGTCCCTATAAACTTCACTCACAAAGCGACAGGAAACTCCATAGCCG TCCCTATGAGCTTGCATGTTGAGGGAACTATCTCAGCATCGTCAAGATTCAAGGCTTGCCTTCTGCTTTCTCCAGTTAAG GGATATCCACTTTTTGATATAACTTGTCGTCTAAGAAGCAAAGAAGGTATACTCCTAAACGAAGTTGAGTACTGGATTTC AGGGCTGTCTCCAAAGTTTCTGACGGAACATCTCCTAATATTTTGTGGGGACTTGTTTCAAACAGACAAATGCCATGAAT TGGATATCACTACGAGTGAGATTCTGTTTGAATTCAGCTGTAGGGACAACGATGACAAGATTATTGAGTGCGGTGTACAG ATCTTGAGGGAGGAAGGCGAGAGTATTAGCAGCGCAATGGACTGCTACGAAACTAGAGGCAACAACAACCACCACACAGA TGGAGAGTATAAAGCAGAAAACACTTTATAA |
| AA seq | Len:917 aa MASSSHRIRKYHVFPSFHGPDVRRKFLSHLHYHFASKGITVFKDQEIVRGQTIGPELKQAIRESRISMVVLSKNYASSSW CLDELVEILECKEACGQMVMTIFLRQEVKQIWSKALTDVAEIAGVHSLSWDDEAKMMQKIVADVSKNLNVTLSRDCDKMI GIWGPAGIGKTTIARALYNQLSSSFPLRCFMGNLKGSYNKSIMGVDDYDSKLCLQSQLLSRIFNQTDMKVHDLCAIKEWL HDQRVLIILDDVEELEQLDTLAKETSWFGPGSRIIFTMKDKNILKAHGIKEIYHVDLPSEEEALEILCLSAFKQRSPREG FKELSHRIAEFCGYLPLGLCVVGSSLRGASKNEWGHQLYRLETSLERKIGNVLRVGYETLLQKDQDLFLHIACFFYNENV DHMTTLLSKSNLDVRNGLKTLADKSLLKVSTDGRIVMHCLLQKLGRQIVLEQSIEPGRRQFLVEPQEICDVLANETGTGS VLGISFDMSKISEFSIRRRAFARMRNLQFLRFYINKPGMHKKVSLLDDMEYLPSLKLLDWNSYPRKRLPPKFRPECLIEL RMQFSKLEKLWGGVQLLVNLKKIDLSYSFKLKEIPNLSETPNLEILRLIFLGTSSISMYETQRLEKFLRQLAGIGLVLHG FILAAENLMTLCYVPESLRKLDLRNSHFITIPDCVISLPFVQSLIIQNCRKLVSLQGLPPSLWCLDATDCRSLTTVLHTF GDPCASFNYRNCVMLEEEARRRIIQQWDYNYLCLPGKEVPINFTHKATGNSIAVPMSLHVEGTISASSRFKACLLLSPVK GYPLFDITCRLRSKEGILLNEVEYWISGLSPKFLTEHLLIFCGDLFQTDKCHELDITTSEILFEFSCRDNDDKIIECGVQ ILREEGESISSAMDCYETRGNNNHHTDGEYKAENTL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |