Names & Information
Knowledge of BnaC06G0270800ZY:
| Gene Name | BnaC06G0270800ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g23930D [Brassica napus] |
| Best Hit (SwissProt) | Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=1 |
| NT seq | Len:1146 nt ATGTATCCAGATGTGTTTCTAAGTTTCAGAGGCCAAGACGTGCGTAGAAGTCTGGTTAGCCATCTCTATCGTGAGCTTTC TCAGAACGGCATAAGAAGTTTTTTAGAAGAGGAGGAGGAGGAGAAGGAGAAGCATAGAGAGAGGCAGGTTTCACCTTCCC TTCTCCGTGCAATTTCAGAGTCAAAATTGGCAGTGGTTGTCTTATCTGAGTACTACGCTTCTTCAAGGTGGTGTTTGGAT GAACTGGACAAGATAATGGGTCATGCTGGCAAGAAATTGATGGCGGCAGTGCCTGTCTTCTACGAGGTAGACTATTGTGA TGTGAGATATCAGAGAGGCAGATTCGGGGAGGAATTTGAGAGACATGGTCAAGAAGAGAATCCAGAGACGTTGCAGAGGT GGAGAGACGCTTTGATCAATTTGACCAGCCAAACCGGCTTCTCCTCTCATGATTCGGAGGATGACTCGAAGCTGGTTCGC GAAATTACGCGTTACGTGTCTGGTTTGTTGTCTGAATTTTGTCTCCTGAAAGAGTTTCTTCCGGGAGACAACAAGTCAAC TGCAAAGAAAACTTCTTCAAGTCGAGTAGTCTCTAATTCCGACCAGCTTATGACTACCATATCTGAGGAGATCATGAAGG ATGTGAGTTGGCTTGGTCTAGGAAGTAGAGTTGTTATAACCACACAAGACAAGAGTTTACTTTTAGCTTGTGGAGTTGAA CATGTCTACGAAGTGGACTATCTGAAATACGATGAAGCTCTTGAGCTCTTCAGCCAATGTGCATTCAAGAAACAGTATCC ACCTACAAAATTTGAACAGCAATCTGTCCGTGCTGTACAGCTAACCGGCTGTCTTCCTTTGGGCCTTAAGTTACTCGGCT CTTTTCTATGTGGTAGAACCAAAGAGGATTGGGAACGGGAACTGCAAAGTCTTGAAGCAAAACAAGGTAAAGCCATTGTC GAACTATTGAAGAATAGCGCCAAAGGCGTACCACCTGGTCCAACCAAAGAGGACTGCGAACGTGAAGAGCGGAGGCTCAA AGCAAAAGATAAAGCCATTCTCGAACTATTAAGAAAGGACTGGGAACGTGAAATGCAGAGGCTCGGGAAAAAAGGGAAGA AGAGAAAGACATTGTTTAACGATTAA |
| AA seq | Len:382 aa MYPDVFLSFRGQDVRRSLVSHLYRELSQNGIRSFLEEEEEEKEKHRERQVSPSLLRAISESKLAVVVLSEYYASSRWCLD ELDKIMGHAGKKLMAAVPVFYEVDYCDVRYQRGRFGEEFERHGQEENPETLQRWRDALINLTSQTGFSSHDSEDDSKLVR EITRYVSGLLSEFCLLKEFLPGDNKSTAKKTSSSRVVSNSDQLMTTISEEIMKDVSWLGLGSRVVITTQDKSLLLACGVE HVYEVDYLKYDEALELFSQCAFKKQYPPTKFEQQSVRAVQLTGCLPLGLKLLGSFLCGRTKEDWERELQSLEAKQGKAIV ELLKNSAKGVPPGPTKEDCEREERRLKAKDKAILELLRKDWEREMQRLGKKGKKRKTLFND* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |